| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
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The map label for this gene is 17548153
Identifier: 17548153
GI number: 17548153
Start: 3705826
End: 3707829
Strand: Direct
Name: 17548153
Synonym: RSc3436
Alternate gene names: NA
Gene position: 3705826-3707829 (Clockwise)
Preceding gene: 17548148
Following gene: 17548154
Centisome position: 99.72
GC content: 47.26
Gene sequence:
>2004_bases ATGAATACTGAAACCATAAACGGCCGGGAAGATTTGTCCACAGAGGATAGCGCTGTTGCGCTGGCGAGGAAGATTCGGGC TTTAACTGAAGGAAATTCAGTTACTCAGCGTCTGTCCGTGGATGATCGAGTGCTTGCACGAGTAACGGATGGAATCTATC GCCAACCTGCTTCGGCTTTGCGGGAATTGATATCTAATGCCTATGACGCTGACGCAACCTCTGTAGTTATTCAGACGGAT GCCCCACGTTTTGAAAGAATAATAATTCGAGACAACGGTAATGGAATGACGCCAGAGGTTCTCGCTGATCTAGTCTGTCA TATTGGCGGCAGCTCAAAGAGAACGAAGAAAGGTACTCGTCTCGGCACGGCTCGAATCGATGATGCTTCTAGAAGCCCTG CGGGGCGAAAGTTGATTGGAAAAATCGGAATTGGTCTTTTCGCTGTCGCGCAGCTGACTCAGCATTTTCAAATTATCACG AAAAGGAAGGGTGATAATTTTCGCACATCAGCTGTAGTGGTATTGAAAACCTATACGGAAGAGAAACTGCTTCTGTCCGA TGATGAGTCAATTCAGTTCGATCCGGGCGACGTCACAATTGTTACCGAGCCAGCTACAGAGCTGGATGCGCATGGGACAG AGATTATTCTTATGAACGTGCGCAAGGCGACCAAAGATTTGCTATGCAGCCTAGATCGATGGTCTGCTTTGGATGAGCAA GCACAGCAGTCAGATGAAGATAAAGATCTATCTGATGGTTTGCTTGGGGCAGTAACAAAACCCCTTTACCACATCGGAAG AGTCAAGGAGGAAAACCGGAACGAGTACCATGAGCATCCTTGTCTCCCTTGGCTCGAGACTGATTCCCCTCATGCTCGGT TCGAGAAGATATATAAAGCAATTACCGATTCAGTCGGTAGGATGATTGGTAATCCAACGCTGACATCTGTTTTCGATGGT TATCTTTCCATGCTTTGGGATTTGGCGGTCGCATGCCCAGTACCTTATCTGAGTGAACACCCTTTCAGTCTAAATAACCA GTCTGGTATTGGTCTGTACAAGCTTTCTAACGAGAAGCGTGTGCCGGCTAAAGAAATCTCTGTTCCAGGTGACTCAAGCA TAGCCACTTTTTTGGAGATGGAGAGTTGTACTGCCGACCCTCTCGGAGGGTTCGCGTTAATGATAGACGGTGTATCGCTG TTGCACCCGATAGTGTTGAGTCGCGAACTTCACAAGAAGGAAGAGAGGGAAAATTTGACGCCTCTTCTTTTTGCCGGGAA ATGTATATCCCCATTTTCTAAGATTGAATCTACGCTGGGAGGGGGGGCGCTTGAGTTTGAGGCGTATTTCTATTGGAATA ATTTGATTGTTCCAAAAGAGAACAATGGAATTCTCATAAGGATAAATGGTGCCAGTGGAACCCTGTTTGATGAGTCATTT CTTGATTATAGAATTTCCGAGTTGACTAGATTGAGGCAAATTACCGCCGAGGTGTATGTCACTAAGGGATTGGATCCCGC ACTCAACATCGATCGTGAGTCATTTAACACCAGTCATCCCCACTATCAATACATAAGGGACTGGGTTCATCGTGCGTTGA GGCAGGTTACAAATAGGCTTAAGGCGATCAATAAAGCGCTCTTGGATGTTTCCCGGCAGACGAAGATTGGCCAGCAAGTG GATCGCCTCACCAACTATGTTCAAGATGTCTGGGAGTTGCAGCGTGGCAAGACTGAGTCGCCGCCGAGTGTTCTTGTTGT CCCAGATGGGAAGACGAGTGATTTTGATGCAGACACGCAAAGAAGAAGAGGAGTAATTGTTATTGATCAGGTGGCAGTGT CTTCGGTCCTGCCAAAGCAGTTGGGCGTAAAAACCGTTGTTCTCGATGCAAAGATTCGCGCATTGATTACTGTGCTTTCG GCTTATGGATTGCTGGAGGGTATGCCTGCAAGTCGAGTGCAGTCTCTGGTTCGTGACGTGAGCGCGGTATTTGAGGGGGA ATAA
Upstream 100 bases:
>100_bases ATCATTATGGTTTGGCCTGTATAATTAATGTTCATCTGCCCAAAGGGGCAGGGATAGCTGGGAAAGCAGCTGGCGGAAGA ATCAATGAACCTTGTGAGCC
Downstream 100 bases:
>100_bases GATGTCAACTTTGCCAGCCACCGATATTCATGTTGATATGCCGGACGGTCCAGTTGCTCCCGGGCTGTCGGCAGAGGTCG CAGAGTTGGTCGACTATTTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 667; Mature: 667
Protein sequence:
>667_residues MNTETINGREDLSTEDSAVALARKIRALTEGNSVTQRLSVDDRVLARVTDGIYRQPASALRELISNAYDADATSVVIQTD APRFERIIIRDNGNGMTPEVLADLVCHIGGSSKRTKKGTRLGTARIDDASRSPAGRKLIGKIGIGLFAVAQLTQHFQIIT KRKGDNFRTSAVVVLKTYTEEKLLLSDDESIQFDPGDVTIVTEPATELDAHGTEIILMNVRKATKDLLCSLDRWSALDEQ AQQSDEDKDLSDGLLGAVTKPLYHIGRVKEENRNEYHEHPCLPWLETDSPHARFEKIYKAITDSVGRMIGNPTLTSVFDG YLSMLWDLAVACPVPYLSEHPFSLNNQSGIGLYKLSNEKRVPAKEISVPGDSSIATFLEMESCTADPLGGFALMIDGVSL LHPIVLSRELHKKEERENLTPLLFAGKCISPFSKIESTLGGGALEFEAYFYWNNLIVPKENNGILIRINGASGTLFDESF LDYRISELTRLRQITAEVYVTKGLDPALNIDRESFNTSHPHYQYIRDWVHRALRQVTNRLKAINKALLDVSRQTKIGQQV DRLTNYVQDVWELQRGKTESPPSVLVVPDGKTSDFDADTQRRRGVIVIDQVAVSSVLPKQLGVKTVVLDAKIRALITVLS AYGLLEGMPASRVQSLVRDVSAVFEGE
Sequences:
>Translated_667_residues MNTETINGREDLSTEDSAVALARKIRALTEGNSVTQRLSVDDRVLARVTDGIYRQPASALRELISNAYDADATSVVIQTD APRFERIIIRDNGNGMTPEVLADLVCHIGGSSKRTKKGTRLGTARIDDASRSPAGRKLIGKIGIGLFAVAQLTQHFQIIT KRKGDNFRTSAVVVLKTYTEEKLLLSDDESIQFDPGDVTIVTEPATELDAHGTEIILMNVRKATKDLLCSLDRWSALDEQ AQQSDEDKDLSDGLLGAVTKPLYHIGRVKEENRNEYHEHPCLPWLETDSPHARFEKIYKAITDSVGRMIGNPTLTSVFDG YLSMLWDLAVACPVPYLSEHPFSLNNQSGIGLYKLSNEKRVPAKEISVPGDSSIATFLEMESCTADPLGGFALMIDGVSL LHPIVLSRELHKKEERENLTPLLFAGKCISPFSKIESTLGGGALEFEAYFYWNNLIVPKENNGILIRINGASGTLFDESF LDYRISELTRLRQITAEVYVTKGLDPALNIDRESFNTSHPHYQYIRDWVHRALRQVTNRLKAINKALLDVSRQTKIGQQV DRLTNYVQDVWELQRGKTESPPSVLVVPDGKTSDFDADTQRRRGVIVIDQVAVSSVLPKQLGVKTVVLDAKIRALITVLS AYGLLEGMPASRVQSLVRDVSAVFEGE >Mature_667_residues MNTETINGREDLSTEDSAVALARKIRALTEGNSVTQRLSVDDRVLARVTDGIYRQPASALRELISNAYDADATSVVIQTD APRFERIIIRDNGNGMTPEVLADLVCHIGGSSKRTKKGTRLGTARIDDASRSPAGRKLIGKIGIGLFAVAQLTQHFQIIT KRKGDNFRTSAVVVLKTYTEEKLLLSDDESIQFDPGDVTIVTEPATELDAHGTEIILMNVRKATKDLLCSLDRWSALDEQ AQQSDEDKDLSDGLLGAVTKPLYHIGRVKEENRNEYHEHPCLPWLETDSPHARFEKIYKAITDSVGRMIGNPTLTSVFDG YLSMLWDLAVACPVPYLSEHPFSLNNQSGIGLYKLSNEKRVPAKEISVPGDSSIATFLEMESCTADPLGGFALMIDGVSL LHPIVLSRELHKKEERENLTPLLFAGKCISPFSKIESTLGGGALEFEAYFYWNNLIVPKENNGILIRINGASGTLFDESF LDYRISELTRLRQITAEVYVTKGLDPALNIDRESFNTSHPHYQYIRDWVHRALRQVTNRLKAINKALLDVSRQTKIGQQV DRLTNYVQDVWELQRGKTESPPSVLVVPDGKTSDFDADTQRRRGVIVIDQVAVSSVLPKQLGVKTVVLDAKIRALITVLS AYGLLEGMPASRVQSLVRDVSAVFEGE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 73931; Mature: 73931
Theoretical pI: Translated: 5.97; Mature: 5.97
Prosite motif: PS00019 ACTININ_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTETINGREDLSTEDSAVALARKIRALTEGNSVTQRLSVDDRVLARVTDGIYRQPASAL CCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHCCCHHHHHHHHHHHHHCHHHHH RELISNAYDADATSVVIQTDAPRFERIIIRDNGNGMTPEVLADLVCHIGGSSKRTKKGTR HHHHHCCCCCCCCEEEEECCCCCEEEEEEEECCCCCCHHHHHHHHHHCCCCCCCCCCCCC LGTARIDDASRSPAGRKLIGKIGIGLFAVAQLTQHFQIITKRKGDNFRTSAVVVLKTYTE CCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCC EKLLLSDDESIQFDPGDVTIVTEPATELDAHGTEIILMNVRKATKDLLCSLDRWSALDEQ CEEEECCCCCEEECCCCEEEEECCCHHHCCCCCEEEEEECHHHHHHHHHCCHHHHHHHHH AQQSDEDKDLSDGLLGAVTKPLYHIGRVKEENRNEYHEHPCLPWLETDSPHARFEKIYKA HHCCCCCCCHHHHHHHHHHHHHHHHHCCCHHCCCHHHCCCCCCCCCCCCCHHHHHHHHHH ITDSVGRMIGNPTLTSVFDGYLSMLWDLAVACPVPYLSEHPFSLNNQSGIGLYKLSNEKR HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCCC VPAKEISVPGDSSIATFLEMESCTADPLGGFALMIDGVSLLHPIVLSRELHKKEERENLT CCHHHCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHCCCC PLLFAGKCISPFSKIESTLGGGALEFEAYFYWNNLIVPKENNGILIRINGASGTLFDESF CEEECCCCCCHHHHHHHHHCCCEEEEEEEEEECCEEEEECCCCEEEEEECCCCCEECHHH LDYRISELTRLRQITAEVYVTKGLDPALNIDRESFNTSHPHYQYIRDWVHRALRQVTNRL HHHHHHHHHHHHHHHHHHEEECCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHH KAINKALLDVSRQTKIGQQVDRLTNYVQDVWELQRGKTESPPSVLVVPDGKTSDFDADTQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCHH RRRGVIVIDQVAVSSVLPKQLGVKTVVLDAKIRALITVLSAYGLLEGMPASRVQSLVRDV HCCCEEEEHHHHHHHHHHHHHCCEEEEEHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH SAVFEGE HHHHCCC >Mature Secondary Structure MNTETINGREDLSTEDSAVALARKIRALTEGNSVTQRLSVDDRVLARVTDGIYRQPASAL CCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHCCCHHHHHHHHHHHHHCHHHHH RELISNAYDADATSVVIQTDAPRFERIIIRDNGNGMTPEVLADLVCHIGGSSKRTKKGTR HHHHHCCCCCCCCEEEEECCCCCEEEEEEEECCCCCCHHHHHHHHHHCCCCCCCCCCCCC LGTARIDDASRSPAGRKLIGKIGIGLFAVAQLTQHFQIITKRKGDNFRTSAVVVLKTYTE CCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCC EKLLLSDDESIQFDPGDVTIVTEPATELDAHGTEIILMNVRKATKDLLCSLDRWSALDEQ CEEEECCCCCEEECCCCEEEEECCCHHHCCCCCEEEEEECHHHHHHHHHCCHHHHHHHHH AQQSDEDKDLSDGLLGAVTKPLYHIGRVKEENRNEYHEHPCLPWLETDSPHARFEKIYKA HHCCCCCCCHHHHHHHHHHHHHHHHHCCCHHCCCHHHCCCCCCCCCCCCCHHHHHHHHHH ITDSVGRMIGNPTLTSVFDGYLSMLWDLAVACPVPYLSEHPFSLNNQSGIGLYKLSNEKR HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCCC VPAKEISVPGDSSIATFLEMESCTADPLGGFALMIDGVSLLHPIVLSRELHKKEERENLT CCHHHCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHCCCC PLLFAGKCISPFSKIESTLGGGALEFEAYFYWNNLIVPKENNGILIRINGASGTLFDESF CEEECCCCCCHHHHHHHHHCCCEEEEEEEEEECCEEEEECCCCEEEEEECCCCCEECHHH LDYRISELTRLRQITAEVYVTKGLDPALNIDRESFNTSHPHYQYIRDWVHRALRQVTNRL HHHHHHHHHHHHHHHHHHEEECCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHH KAINKALLDVSRQTKIGQQVDRLTNYVQDVWELQRGKTESPPSVLVVPDGKTSDFDADTQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCHH RRRGVIVIDQVAVSSVLPKQLGVKTVVLDAKIRALITVLSAYGLLEGMPASRVQSLVRDV HCCCEEEEHHHHHHHHHHHHHCCEEEEEHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH SAVFEGE HHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA