Definition Ralstonia solanacearum GMI1000, complete genome.
Accession NC_003295
Length 3,716,413

Click here to switch to the map view.

The map label for this gene is 17548154

Identifier: 17548154

GI number: 17548154

Start: 3707831

End: 3709099

Strand: Direct

Name: 17548154

Synonym: RSc3437

Alternate gene names: NA

Gene position: 3707831-3709099 (Clockwise)

Preceding gene: 17548153

Following gene: NA

Centisome position: 99.77

GC content: 50.43

Gene sequence:

>1269_bases
ATGTCAACTTTGCCAGCCACCGATATTCATGTTGATATGCCGGACGGTCCAGTTGCTCCCGGGCTGTCGGCAGAGGTCGC
AGAGTTGGTCGACTATTTGCCGCAGCGCCCTGAAACTCCACAAGCTCCGCAACAACTGAGGTTCAAGCCGTGGCACAAAC
CGCGTAAGCAATTCATTCGGAGAAAGCAATGGTGGCAGGAAATTGAGGCGCTATTAAATGAACATCACATGCCACCGGAC
AATCGAGTGTTGCGATATTTGACACTACCGAGTGAAGACATGATTGATGTGCGTGTATTGACTGAGGAGTTGGCGGGGAG
AGATGTCAGGCTCAAATATCTTGGCTACTGCGATGTGAAGACTGGAAGCCGGGACGATGAGCGGATGAATCTTGCAGATA
ATTCCGTGAGGGAATCGGTCGTCGTGGAGCCATCTTCTATTATCGTGCGTGAGCGGCTTGAAGATGCTGCGAATGCAGAT
AGCCTGGCTTTTGGGGCCCTCAGGGAGCACGGCCCTTTTCACGCGGTGAATATCGATCTATGTCAGAATTTTGCCGCCCC
CCGAGTCGAGAACGTTTACGCATGCGTCGATGCTATCGCTAGTATAGTGAATCTGCAGATAGAGCGATTGCAAAAAAGCT
GGCTACTTTTTGTAACAACTCGCGTAACTCCGGAACACATCGATGCAGCACATTTGGAAGCGTTTGTAAGTGCAATTCTG
GAAAACGTTGCTCGAAGTAGGGAGTTTAAGCGCCAGGCTGCTGACTTATTTTGTGCCGAAGGGCTGGCACTTACCGAGAA
GCTAGCAAGGGCTCGGGAACTACCTTTTGAAGACTATAAGAATCTCTTTTGCGTCGGACTCGGAAAGTGGTTGCTGGCTT
ACGTATCTAACTCTGTGCCTCAGCTCAAACTGGAAATGTTGCCAAGTTATTATTACTCGGTGTACGCGGGAAACCCCGAT
ATGCTGTCGCTGGCTTATCGATGCACTTTGCAGACTCAGGCCCCGGCTGATCCGACCGGACTGGCGACGGGTGTCGGTGT
TGCTCATCAACACGAGAATATTGCTGGTGATGAAGTGGACCTAGGTTTAAAGATCCTCGAGAAAACGAAAACTCTGATTG
ATCTAGATAACCATTTGGCAGGTTCACCGACAGAAATGAATGCAATGATTCTGGAGTCCGCGCGCTTTCTTAAGCTGGCA
GGTTACAACGTAGACAACTATCGGGAGTTTGCCGAAAGAGTGGTGGGCACCGCTACAGCAGCCAGTTGA

Upstream 100 bases:

>100_bases
ATTACTGTGCTTTCGGCTTATGGATTGCTGGAGGGTATGCCTGCAAGTCGAGTGCAGTCTCTGGTTCGTGACGTGAGCGC
GGTATTTGAGGGGGAATAAG

Downstream 100 bases:

>100_bases
CGAGCAGTCAAATTGAGGCGGCATTGTGCCGCCATTTCAACATGCCTGGTGGCATTGACTAAATTTAGCTGTTCTTGTAT
TGACATCGCCACGGCATACG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 422; Mature: 421

Protein sequence:

>422_residues
MSTLPATDIHVDMPDGPVAPGLSAEVAELVDYLPQRPETPQAPQQLRFKPWHKPRKQFIRRKQWWQEIEALLNEHHMPPD
NRVLRYLTLPSEDMIDVRVLTEELAGRDVRLKYLGYCDVKTGSRDDERMNLADNSVRESVVVEPSSIIVRERLEDAANAD
SLAFGALREHGPFHAVNIDLCQNFAAPRVENVYACVDAIASIVNLQIERLQKSWLLFVTTRVTPEHIDAAHLEAFVSAIL
ENVARSREFKRQAADLFCAEGLALTEKLARARELPFEDYKNLFCVGLGKWLLAYVSNSVPQLKLEMLPSYYYSVYAGNPD
MLSLAYRCTLQTQAPADPTGLATGVGVAHQHENIAGDEVDLGLKILEKTKTLIDLDNHLAGSPTEMNAMILESARFLKLA
GYNVDNYREFAERVVGTATAAS

Sequences:

>Translated_422_residues
MSTLPATDIHVDMPDGPVAPGLSAEVAELVDYLPQRPETPQAPQQLRFKPWHKPRKQFIRRKQWWQEIEALLNEHHMPPD
NRVLRYLTLPSEDMIDVRVLTEELAGRDVRLKYLGYCDVKTGSRDDERMNLADNSVRESVVVEPSSIIVRERLEDAANAD
SLAFGALREHGPFHAVNIDLCQNFAAPRVENVYACVDAIASIVNLQIERLQKSWLLFVTTRVTPEHIDAAHLEAFVSAIL
ENVARSREFKRQAADLFCAEGLALTEKLARARELPFEDYKNLFCVGLGKWLLAYVSNSVPQLKLEMLPSYYYSVYAGNPD
MLSLAYRCTLQTQAPADPTGLATGVGVAHQHENIAGDEVDLGLKILEKTKTLIDLDNHLAGSPTEMNAMILESARFLKLA
GYNVDNYREFAERVVGTATAAS
>Mature_421_residues
STLPATDIHVDMPDGPVAPGLSAEVAELVDYLPQRPETPQAPQQLRFKPWHKPRKQFIRRKQWWQEIEALLNEHHMPPDN
RVLRYLTLPSEDMIDVRVLTEELAGRDVRLKYLGYCDVKTGSRDDERMNLADNSVRESVVVEPSSIIVRERLEDAANADS
LAFGALREHGPFHAVNIDLCQNFAAPRVENVYACVDAIASIVNLQIERLQKSWLLFVTTRVTPEHIDAAHLEAFVSAILE
NVARSREFKRQAADLFCAEGLALTEKLARARELPFEDYKNLFCVGLGKWLLAYVSNSVPQLKLEMLPSYYYSVYAGNPDM
LSLAYRCTLQTQAPADPTGLATGVGVAHQHENIAGDEVDLGLKILEKTKTLIDLDNHLAGSPTEMNAMILESARFLKLAG
YNVDNYREFAERVVGTATAAS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 47282; Mature: 47151

Theoretical pI: Translated: 5.11; Mature: 5.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTLPATDIHVDMPDGPVAPGLSAEVAELVDYLPQRPETPQAPQQLRFKPWHKPRKQFIR
CCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHCCCCCCCCHHHHHHH
RKQWWQEIEALLNEHHMPPDNRVLRYLTLPSEDMIDVRVLTEELAGRDVRLKYLGYCDVK
HHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCHHHHHHHHHHCCCCEEEEEEEEEECC
TGSRDDERMNLADNSVRESVVVEPSSIIVRERLEDAANADSLAFGALREHGPFHAVNIDL
CCCCCCHHHCCCHHHHHHHEEECCHHHHHHHHHHHHCCCCHHHHHHHHHCCCEEEEEHHH
CQNFAAPRVENVYACVDAIASIVNLQIERLQKSWLLFVTTRVTPEHIDAAHLEAFVSAIL
HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEECCCHHHCCHHHHHHHHHHHH
ENVARSREFKRQAADLFCAEGLALTEKLARARELPFEDYKNLFCVGLGKWLLAYVSNSVP
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHCCEEHHHHHHHHHHHHHCCCC
QLKLEMLPSYYYSVYAGNPDMLSLAYRCTLQTQAPADPTGLATGVGVAHQHENIAGDEVD
HHHHHHHHHHHEEEEECCCCCEEEEEEEEECCCCCCCCCCCHHCCCCHHCCCCCCCCCHH
LGLKILEKTKTLIDLDNHLAGSPTEMNAMILESARFLKLAGYNVDNYREFAERVVGTATA
HHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHC
AS
CC
>Mature Secondary Structure 
STLPATDIHVDMPDGPVAPGLSAEVAELVDYLPQRPETPQAPQQLRFKPWHKPRKQFIR
CCCCCCCEEEECCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHCCCCCCCCHHHHHHH
RKQWWQEIEALLNEHHMPPDNRVLRYLTLPSEDMIDVRVLTEELAGRDVRLKYLGYCDVK
HHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCHHHHHHHHHHCCCCEEEEEEEEEECC
TGSRDDERMNLADNSVRESVVVEPSSIIVRERLEDAANADSLAFGALREHGPFHAVNIDL
CCCCCCHHHCCCHHHHHHHEEECCHHHHHHHHHHHHCCCCHHHHHHHHHCCCEEEEEHHH
CQNFAAPRVENVYACVDAIASIVNLQIERLQKSWLLFVTTRVTPEHIDAAHLEAFVSAIL
HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEECCCHHHCCHHHHHHHHHHHH
ENVARSREFKRQAADLFCAEGLALTEKLARARELPFEDYKNLFCVGLGKWLLAYVSNSVP
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHCCEEHHHHHHHHHHHHHCCCC
QLKLEMLPSYYYSVYAGNPDMLSLAYRCTLQTQAPADPTGLATGVGVAHQHENIAGDEVD
HHHHHHHHHHHEEEEECCCCCEEEEEEEEECCCCCCCCCCCHHCCCCHHCCCCCCCCCHH
LGLKILEKTKTLIDLDNHLAGSPTEMNAMILESARFLKLAGYNVDNYREFAERVVGTATA
HHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHC
AS
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA