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The map label for this gene is yneE [C]

Identifier: 17548131

GI number: 17548131

Start: 3691108

End: 3692028

Strand: Reverse

Name: yneE [C]

Synonym: RSc3414

Alternate gene names: 17548131

Gene position: 3692028-3691108 (Counterclockwise)

Preceding gene: 17548135

Following gene: 17548129

Centisome position: 99.34

GC content: 66.56

Gene sequence:

>921_bases
ATGGTCGTCCGCCCGCACCTGCACTGGTTCCGCATGCTGCTCGCGTGGCGGGGCTCGGTGCTCCCGCAGCTGTTGCCGCG
CCTGTTCCTGATCTTCTGCATCTCGCTGGTCGCGATGGCCGTGCATGTGCATTGGCTGCCCATCACGGTCAACCTGAGCA
CGACGCCGTTCTCGCTGATCGGCATTGCGCTGGCGGTGTTTCTGGGGTTCCGCAACAACGCCAGCTACGACCGCTACTGG
GAGGCGCGCAAGCTCTGGGGCCAGTTGCTCAACGATGCGCGCTCGATGACGCGCCAGGCGCTGACGCTGCCGCGCGAGAC
GCTGGCGGCGGCGGATGTGCGCGAGTTCGTGCAGGTGCTCGGTGCCTTGCCGCATGCGCTGCGCCATCAGTTGCGCCGGA
CCGATCCGCGCGACGATCTCTCGGCCCGGTTGCCAGCGCCGCTGTTTGAGCGGGTGATGGCGTCGCGCTATCGGCCGGCG
GCCCTCATGCTGTGGCTGGGCGAGTGGGTGCGGCAGCGCTCGCGCGAGGGCTCGCTCGATGCGTGGGCCGTGCTCGCGTT
CGACCGCAACCTGGGCTCGCTATCGAATGTGATCGGCGGCTGCGAGCGTATCGTGTCGACGCCGCTGCCGTTTGCGTACT
CGGTGATGATCCACCGCACCGTCTACTTCTTCTGTGCGGCGCTGCCGTTCGGGCTGGTGGAGAGCATCGGCAACTTCACG
CCCGTCTTCTCGGTGTTCGTGGCCTATGCCTTCATGGCGCACGAGGCTATCGCCGCGCAGATCGAGGAGCCGTTCGGCAC
GGAGGACAACGACCTCGCGCTCAACACGATGTCGCTGATGATTGAAGACGCGGTGCGGGATCTGATAGGTGAGCCGAGTC
TGGGCGATGAGGCAGCGGCGCGGGCGTTCATTCTGGATTGA

Upstream 100 bases:

>100_bases
CCACTGGACGAAGCCAAGGCGGCGCTGCAGCGGGCGATGGCGATGGCGCTATCGCCCCCTCTGCCATAATGGCCCGACCT
CCGGCCCCCTCCCTCACGCC

Downstream 100 bases:

>100_bases
GTGTTCACGCTGGCTGTGCTTCGATCAGCCCGTCAGTTCGTAGGACGTGCTGCGCCCGCCCGCATCGGACTTGCGCAGCA
CGCCCAGCGCAAGCAGTTCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 306; Mature: 306

Protein sequence:

>306_residues
MVVRPHLHWFRMLLAWRGSVLPQLLPRLFLIFCISLVAMAVHVHWLPITVNLSTTPFSLIGIALAVFLGFRNNASYDRYW
EARKLWGQLLNDARSMTRQALTLPRETLAAADVREFVQVLGALPHALRHQLRRTDPRDDLSARLPAPLFERVMASRYRPA
ALMLWLGEWVRQRSREGSLDAWAVLAFDRNLGSLSNVIGGCERIVSTPLPFAYSVMIHRTVYFFCAALPFGLVESIGNFT
PVFSVFVAYAFMAHEAIAAQIEEPFGTEDNDLALNTMSLMIEDAVRDLIGEPSLGDEAAARAFILD

Sequences:

>Translated_306_residues
MVVRPHLHWFRMLLAWRGSVLPQLLPRLFLIFCISLVAMAVHVHWLPITVNLSTTPFSLIGIALAVFLGFRNNASYDRYW
EARKLWGQLLNDARSMTRQALTLPRETLAAADVREFVQVLGALPHALRHQLRRTDPRDDLSARLPAPLFERVMASRYRPA
ALMLWLGEWVRQRSREGSLDAWAVLAFDRNLGSLSNVIGGCERIVSTPLPFAYSVMIHRTVYFFCAALPFGLVESIGNFT
PVFSVFVAYAFMAHEAIAAQIEEPFGTEDNDLALNTMSLMIEDAVRDLIGEPSLGDEAAARAFILD
>Mature_306_residues
MVVRPHLHWFRMLLAWRGSVLPQLLPRLFLIFCISLVAMAVHVHWLPITVNLSTTPFSLIGIALAVFLGFRNNASYDRYW
EARKLWGQLLNDARSMTRQALTLPRETLAAADVREFVQVLGALPHALRHQLRRTDPRDDLSARLPAPLFERVMASRYRPA
ALMLWLGEWVRQRSREGSLDAWAVLAFDRNLGSLSNVIGGCERIVSTPLPFAYSVMIHRTVYFFCAALPFGLVESIGNFT
PVFSVFVAYAFMAHEAIAAQIEEPFGTEDNDLALNTMSLMIEDAVRDLIGEPSLGDEAAARAFILD

Specific function: Unknown

COG id: COG3781

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0187 family

Homologues:

Organism=Escherichia coli, GI87081925, Length=306, Percent_Identity=40.8496732026144, Blast_Score=234, Evalue=4e-63,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y3414_RALSO (Q8XTY1)

Other databases:

- EMBL:   AL646052
- RefSeq:   NP_521533.1
- GeneID:   1222278
- GenomeReviews:   AL646052_GR
- KEGG:   rso:RSc3414
- NMPDR:   fig|267608.1.peg.3412
- HOGENOM:   HBG520274
- OMA:   RIRSTPV
- ProtClustDB:   CLSK809871
- BioCyc:   RSOL267608:RSC3414-MONOMER
- InterPro:   IPR021134

Pfam domain/function: PF01062 Bestrophin

EC number: NA

Molecular weight: Translated: 34467; Mature: 34467

Theoretical pI: Translated: 7.25; Mature: 7.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xf7f1c1c)-; HASH(0x487ef814)-; HASH(0xf66df08)-;

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVVRPHLHWFRMLLAWRGSVLPQLLPRLFLIFCISLVAMAVHVHWLPITVNLSTTPFSLI
CCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEECCCHHHHH
GIALAVFLGFRNNASYDRYWEARKLWGQLLNDARSMTRQALTLPRETLAAADVREFVQVL
HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
GALPHALRHQLRRTDPRDDLSARLPAPLFERVMASRYRPAALMLWLGEWVRQRSREGSLD
HHHHHHHHHHHHCCCCCCCHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCC
AWAVLAFDRNLGSLSNVIGGCERIVSTPLPFAYSVMIHRTVYFFCAALPFGLVESIGNFT
HHHHHHHHCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PVFSVFVAYAFMAHEAIAAQIEEPFGTEDNDLALNTMSLMIEDAVRDLIGEPSLGDEAAA
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHH
RAFILD
HHHCCH
>Mature Secondary Structure
MVVRPHLHWFRMLLAWRGSVLPQLLPRLFLIFCISLVAMAVHVHWLPITVNLSTTPFSLI
CCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEECCCHHHHH
GIALAVFLGFRNNASYDRYWEARKLWGQLLNDARSMTRQALTLPRETLAAADVREFVQVL
HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
GALPHALRHQLRRTDPRDDLSARLPAPLFERVMASRYRPAALMLWLGEWVRQRSREGSLD
HHHHHHHHHHHHCCCCCCCHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCC
AWAVLAFDRNLGSLSNVIGGCERIVSTPLPFAYSVMIHRTVYFFCAALPFGLVESIGNFT
HHHHHHHHCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PVFSVFVAYAFMAHEAIAAQIEEPFGTEDNDLALNTMSLMIEDAVRDLIGEPSLGDEAAA
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHH
RAFILD
HHHCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11823852