| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
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The map label for this gene is 17548130
Identifier: 17548130
GI number: 17548130
Start: 3689968
End: 3691083
Strand: Direct
Name: 17548130
Synonym: RSc3413
Alternate gene names: NA
Gene position: 3689968-3691083 (Clockwise)
Preceding gene: 17548128
Following gene: 17548132
Centisome position: 99.29
GC content: 67.83
Gene sequence:
>1116_bases ATGAAACGCGGAGATTGGCTCTACATCTGGCAGGCGCCCGAATGGCCCGCCCTGCACTACGACCTTGCAGCGCTGGCAGG CCCGCTGACGGAGGTTGCGCGTGCGCAAGGCCTTCTGCTGGGCCGCCTGGCTGACGTCGGCATGGACATGCGCGACCAGG CCAGCCTTGCTGCCCTCACCAACGACGTCCTCAAGACCAGCGAGATCGAAGGCGAACGGCTCGATGCCGAGTCGGTGCGT TCGTCCATCGCCCGTCATCTGGGGGTCGATATCGGCGCATTGGCCCCCGTGGACCGGCACGTGGAAGGCGTGGTCGAGAT GGTGTTGGATGCCACGCTTCACTGCGATGCGCCGGTCACGGTCGAACGCCTGTTCGGCTGGCACGCCGCGCTCTTCCCCA TCGGCTACAGCGGCTTATCCCGCTTGCGCGTGGGAGCCTGGCGCGATGATGCCAAGGGCGCGATGCAGGTGATTTCCGGC CCGATGCACCGGCCGCGCGTCCATGTCGAAGCGCCGCCCGCGGACCGGCTGGACGCGGAGGTGGCCCGCTTGATCGACTG GGTCAACGCGCAGACCTCGGACCCGCCCCTCCTCAAGGCCGGTCTGGCGCATCTGTGGTTCGTCACGCTGCATCCCTTCG ACGACGGCAACGGCCGCATCGCGCGCGCCCTCGGCGATCTGCTGCTGGCCCGGGCGGATGGCAGCCCGCAGCGGTTCTAC AGCCTGTCCGCGCAGATTCAGCGCGAGCGGAAGGACTACTACGACATGCTCGAACGGACCCAGAAAGGCACGCTCGACGT GACCGGCTGGCTGGCGTGGTTTCTCGGCGCGCTCCACCGGGCCGTCGGGAGCGCCCAGCATACGCTCGACGCCGTCCTCG CCAAGACGCGCTTCTGGCAGCGTTGGGCCGCCACGCCGATGAACGGCCGGCAGGTCAAGCTGCTCAACCGCCTGCTCGAC GGATTCGAGGGCAAGCTCACCAGCAGCAAATGGGCCGCGATGGCCAAGTGTTCAGCGGATACGGCGCTGCGGGATATCAA CGAACTGCTTGCGCTGGGCGTGCTGCGCAAGTCCGATGCGGGCGGGCGCAGCACGTCCTACGAACTGACGGGCTGA
Upstream 100 bases:
>100_bases GTTCGGATCGCCGCGGTACAAGCGACGCGCGTGCGGAGATTTGGACGCTATTCTCCGCAAAATACGCGGTGATTACATTG CCGGTGCGCATAATCTCCGC
Downstream 100 bases:
>100_bases TCGAAGCACAGCCAGCGTGAACACTCAATCCAGAATGAACGCCCGCGCCGCTGCCTCATCGCCCAGACTCGGCTCACCTA TCAGATCCCGCACCGCGTCT
Product: hypothetical protein
Products: NA
Alternate protein names: Fic Family Protein; Xin-Antitoxin System Toxin Component Fic Family; Filamentation Induced By Camp Protein Fic; Cell Filamentation Protein; Fic Protein Family; Filamentation Induced By CAMP Protein Family Protein; -Like Protein; Homolog; Transcription Regulator
Number of amino acids: Translated: 371; Mature: 371
Protein sequence:
>371_residues MKRGDWLYIWQAPEWPALHYDLAALAGPLTEVARAQGLLLGRLADVGMDMRDQASLAALTNDVLKTSEIEGERLDAESVR SSIARHLGVDIGALAPVDRHVEGVVEMVLDATLHCDAPVTVERLFGWHAALFPIGYSGLSRLRVGAWRDDAKGAMQVISG PMHRPRVHVEAPPADRLDAEVARLIDWVNAQTSDPPLLKAGLAHLWFVTLHPFDDGNGRIARALGDLLLARADGSPQRFY SLSAQIQRERKDYYDMLERTQKGTLDVTGWLAWFLGALHRAVGSAQHTLDAVLAKTRFWQRWAATPMNGRQVKLLNRLLD GFEGKLTSSKWAAMAKCSADTALRDINELLALGVLRKSDAGGRSTSYELTG
Sequences:
>Translated_371_residues MKRGDWLYIWQAPEWPALHYDLAALAGPLTEVARAQGLLLGRLADVGMDMRDQASLAALTNDVLKTSEIEGERLDAESVR SSIARHLGVDIGALAPVDRHVEGVVEMVLDATLHCDAPVTVERLFGWHAALFPIGYSGLSRLRVGAWRDDAKGAMQVISG PMHRPRVHVEAPPADRLDAEVARLIDWVNAQTSDPPLLKAGLAHLWFVTLHPFDDGNGRIARALGDLLLARADGSPQRFY SLSAQIQRERKDYYDMLERTQKGTLDVTGWLAWFLGALHRAVGSAQHTLDAVLAKTRFWQRWAATPMNGRQVKLLNRLLD GFEGKLTSSKWAAMAKCSADTALRDINELLALGVLRKSDAGGRSTSYELTG >Mature_371_residues MKRGDWLYIWQAPEWPALHYDLAALAGPLTEVARAQGLLLGRLADVGMDMRDQASLAALTNDVLKTSEIEGERLDAESVR SSIARHLGVDIGALAPVDRHVEGVVEMVLDATLHCDAPVTVERLFGWHAALFPIGYSGLSRLRVGAWRDDAKGAMQVISG PMHRPRVHVEAPPADRLDAEVARLIDWVNAQTSDPPLLKAGLAHLWFVTLHPFDDGNGRIARALGDLLLARADGSPQRFY SLSAQIQRERKDYYDMLERTQKGTLDVTGWLAWFLGALHRAVGSAQHTLDAVLAKTRFWQRWAATPMNGRQVKLLNRLLD GFEGKLTSSKWAAMAKCSADTALRDINELLALGVLRKSDAGGRSTSYELTG
Specific function: Unknown
COG id: COG3177
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40837; Mature: 40837
Theoretical pI: Translated: 7.13; Mature: 7.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRGDWLYIWQAPEWPALHYDLAALAGPLTEVARAQGLLLGRLADVGMDMRDQASLAALT CCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH NDVLKTSEIEGERLDAESVRSSIARHLGVDIGALAPVDRHVEGVVEMVLDATLHCDAPVT HHHHHHHCCCCCCCCHHHHHHHHHHHHCCCHHHCCCHHHHHHHHHHHHHHHHHCCCCCHH VERLFGWHAALFPIGYSGLSRLRVGAWRDDAKGAMQVISGPMHRPRVHVEAPPADRLDAE HHHHHHHHHHHHHCCHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCEEEEECCCCHHHHHH VARLIDWVNAQTSDPPLLKAGLAHLWFVTLHPFDDGNGRIARALGDLLLARADGSPQRFY HHHHHHHHCCCCCCCHHHHHHHHHEEEEEEECCCCCCCHHHHHHHHHHHHCCCCCHHHHH SLSAQIQRERKDYYDMLERTQKGTLDVTGWLAWFLGALHRAVGSAQHTLDAVLAKTRFWQ HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH RWAATPMNGRQVKLLNRLLDGFEGKLTSSKWAAMAKCSADTALRDINELLALGVLRKSDA HHCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC GGRSTSYELTG CCCCCCEEECC >Mature Secondary Structure MKRGDWLYIWQAPEWPALHYDLAALAGPLTEVARAQGLLLGRLADVGMDMRDQASLAALT CCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH NDVLKTSEIEGERLDAESVRSSIARHLGVDIGALAPVDRHVEGVVEMVLDATLHCDAPVT HHHHHHHCCCCCCCCHHHHHHHHHHHHCCCHHHCCCHHHHHHHHHHHHHHHHHCCCCCHH VERLFGWHAALFPIGYSGLSRLRVGAWRDDAKGAMQVISGPMHRPRVHVEAPPADRLDAE HHHHHHHHHHHHHCCHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCEEEEECCCCHHHHHH VARLIDWVNAQTSDPPLLKAGLAHLWFVTLHPFDDGNGRIARALGDLLLARADGSPQRFY HHHHHHHHCCCCCCCHHHHHHHHHEEEEEEECCCCCCCHHHHHHHHHHHHCCCCCHHHHH SLSAQIQRERKDYYDMLERTQKGTLDVTGWLAWFLGALHRAVGSAQHTLDAVLAKTRFWQ HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH RWAATPMNGRQVKLLNRLLDGFEGKLTSSKWAAMAKCSADTALRDINELLALGVLRKSDA HHCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC GGRSTSYELTG CCCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA