| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
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The map label for this gene is 17548123
Identifier: 17548123
GI number: 17548123
Start: 3682665
End: 3683465
Strand: Direct
Name: 17548123
Synonym: RSc3406
Alternate gene names: NA
Gene position: 3682665-3683465 (Clockwise)
Preceding gene: 17548118
Following gene: 17548128
Centisome position: 99.09
GC content: 72.28
Gene sequence:
>801_bases ATGACGGATGTGACGGCCAGCGCGCCTGCCCTCTTGCCCGGCCCCGACCACAGCACCCTGCGCGCCCAGCGCATCGACGG CGACCCCACCCGGCCCACCCTCGTCTTCCTGCACGAGGGCCTGGGCTGCATCGAGATGTGGGGCGACTACCCGCAACGGC TGTGCGCGGCCACCGGCTGCCCCGGCCTGGTCTATGACCGCGTCGGCTACGGGCAGTCCTCGCCGATGACGCGGCCGCGC GGGCTCGACTATCTGCACCTCGCCGCCTGCATCGAATTGCCGCACGTGCTGCGGGCCCTGATGCCCGACACGCCCTACGT GCTGATCGGCCACTCGGACGGCGGCAGCATCGCCCTCATCCACGCGGCCGACCAGCCGGCGCAGCTGCGCGCCGTCGTCA CCGAAGCGGCGCACGTGTTCGTGGAGGACGCATCGCTGGCCGGCATCCGCGAGGCCGATGCCGCATTCGATGCGGGCAAG CTGGCGGGCCTGGCGCGCTATCACGGCGACAAGACCACGCAGACCTTCAAGGCGTGGTCCGAGACCTGGCAGCGCGCCGA TTTCCGCGACTGGAACATCGAAGCGCTGCTGCCCCGGATCGCCTGCCCGCTGCTGGTGATGCAGGGCGAGGACGATCAGT ACGGCACGCCCGCGCAGGTCGACGCGATCGTGCGGCAGGCCGGCGGCCTCGCCACGCCGGTGCTGCTGCCCGGCTGCGGG CACACGCCGCACAGGACGCACGCCGATGCGGTGCTGGGGCACATGCGCGCCTTCATCGAGGCGCTGCGCCTGCCCGCCTG A
Upstream 100 bases:
>100_bases AGACTTAGATGCCCCATAGCCGGCGTGGGCGCCACGCTCGGGGACCTCGGGCACAATAGGCGGCCGAATCCCCATCCACC GCTTTCGACCGGAGTGTCAC
Downstream 100 bases:
>100_bases GCGCACTCAGCCAAGCTTGTCCAGCAGGCTGTACCACGCCACCCCGGCGGCGATGTAGAAGCGCTGCAGGCCGTGCAGCG GAATCGGCACGATGGGCGAC
Product: hydrolase-related protein
Products: NA
Alternate protein names: Alpha/Beta Hydrolase Fold Protein; Hydrolase; Alpha/Beta Hydrolase; Lactonase; Hydrolase-Related Protein; Alpha/Beta Family Hydrolase; Alpha/Beta Hydrolase Fold Family Protein; Alpha/Beta Fold Family Hydrolase; Hydrolase Or Acyltransferase; Aryl-Ester Hydrolase; Alpha/Beta Hydrolase Superfamily Protein; Hydrolase Alpha/Beta Fold Family; Serine Hydrolase
Number of amino acids: Translated: 266; Mature: 265
Protein sequence:
>266_residues MTDVTASAPALLPGPDHSTLRAQRIDGDPTRPTLVFLHEGLGCIEMWGDYPQRLCAATGCPGLVYDRVGYGQSSPMTRPR GLDYLHLAACIELPHVLRALMPDTPYVLIGHSDGGSIALIHAADQPAQLRAVVTEAAHVFVEDASLAGIREADAAFDAGK LAGLARYHGDKTTQTFKAWSETWQRADFRDWNIEALLPRIACPLLVMQGEDDQYGTPAQVDAIVRQAGGLATPVLLPGCG HTPHRTHADAVLGHMRAFIEALRLPA
Sequences:
>Translated_266_residues MTDVTASAPALLPGPDHSTLRAQRIDGDPTRPTLVFLHEGLGCIEMWGDYPQRLCAATGCPGLVYDRVGYGQSSPMTRPR GLDYLHLAACIELPHVLRALMPDTPYVLIGHSDGGSIALIHAADQPAQLRAVVTEAAHVFVEDASLAGIREADAAFDAGK LAGLARYHGDKTTQTFKAWSETWQRADFRDWNIEALLPRIACPLLVMQGEDDQYGTPAQVDAIVRQAGGLATPVLLPGCG HTPHRTHADAVLGHMRAFIEALRLPA >Mature_265_residues TDVTASAPALLPGPDHSTLRAQRIDGDPTRPTLVFLHEGLGCIEMWGDYPQRLCAATGCPGLVYDRVGYGQSSPMTRPRG LDYLHLAACIELPHVLRALMPDTPYVLIGHSDGGSIALIHAADQPAQLRAVVTEAAHVFVEDASLAGIREADAAFDAGKL AGLARYHGDKTTQTFKAWSETWQRADFRDWNIEALLPRIACPLLVMQGEDDQYGTPAQVDAIVRQAGGLATPVLLPGCGH TPHRTHADAVLGHMRAFIEALRLPA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28636; Mature: 28505
Theoretical pI: Translated: 6.06; Mature: 6.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDVTASAPALLPGPDHSTLRAQRIDGDPTRPTLVFLHEGLGCIEMWGDYPQRLCAATGC CCCCCCCCCEECCCCCCCCEEEECCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCC PGLVYDRVGYGQSSPMTRPRGLDYLHLAACIELPHVLRALMPDTPYVLIGHSDGGSIALI CCHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCEEEE HAADQPAQLRAVVTEAAHVFVEDASLAGIREADAAFDAGKLAGLARYHGDKTTQTFKAWS EECCCCHHHHHHHHHHHHHEEECCCCCCCHHHHHHHCHHHHHHHHHHCCCCHHHHHHHHH ETWQRADFRDWNIEALLPRIACPLLVMQGEDDQYGTPAQVDAIVRQAGGLATPVLLPGCG HHHHCCCCCCCCHHHHHHHHHCCEEEEECCCCCCCCCHHHHHHHHHHCCCCCCEEECCCC HTPHRTHADAVLGHMRAFIEALRLPA CCCCCCHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure TDVTASAPALLPGPDHSTLRAQRIDGDPTRPTLVFLHEGLGCIEMWGDYPQRLCAATGC CCCCCCCCEECCCCCCCCEEEECCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCC PGLVYDRVGYGQSSPMTRPRGLDYLHLAACIELPHVLRALMPDTPYVLIGHSDGGSIALI CCHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCEEEE HAADQPAQLRAVVTEAAHVFVEDASLAGIREADAAFDAGKLAGLARYHGDKTTQTFKAWS EECCCCHHHHHHHHHHHHHEEECCCCCCCHHHHHHHCHHHHHHHHHHCCCCHHHHHHHHH ETWQRADFRDWNIEALLPRIACPLLVMQGEDDQYGTPAQVDAIVRQAGGLATPVLLPGCG HHHHCCCCCCCCHHHHHHHHHCCEEEEECCCCCCCCCHHHHHHHHHHCCCCCCEEECCCC HTPHRTHADAVLGHMRAFIEALRLPA CCCCCCHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA