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The map label for this gene is nsrR [H]

Identifier: 17548114

GI number: 17548114

Start: 3665863

End: 3666381

Strand: Reverse

Name: nsrR [H]

Synonym: RSc3397

Alternate gene names: 17548114

Gene position: 3666381-3665863 (Counterclockwise)

Preceding gene: 17548117

Following gene: 17548113

Centisome position: 98.65

GC content: 65.9

Gene sequence:

>519_bases
ATGCGACTCACCGACTACACCGACTACAGCCTGCGCACGCTGATCTATGTGGCCGTGCATCCCGACGTGCTGGTGACCAT
CCAGCAGATCGCTGACGCGTTCGGCATTCCCAAGAACCACTTGATCAAGATCGTGCAGGGGCTCGGGCAGAACGGCTTCC
TGCATACCGTGCGGGGACGCGCGGGCGGCATCACGCTGGGGCGGCCCGCGGTCGAAATCAACATCGGCGACGTGGTGCGC
GCGACCGAGCCAGATTTCAGCCTGGTGGAATGCTTCCACGTCAACGACAACCACTGCATCATCACCCGTGTGTGCGGGTT
GCGCGGCGTGTTGGCAGCCGCACTCCAGGCGTACTTCGAGGTGCTGGACACGTACACGCTGCAGGACCTGATCGAGCGGC
CCGCCGCGCTGAACCGGGTACTGGCCGAAGGCGTGGCGGTGCCGATGCCACAGTCTGGCAAGGGCAGGACACCGAAGGCG
GCCCCGGCCGCCGGCTCACGCACGCGCAAGAGCGGCTGA

Upstream 100 bases:

>100_bases
GGATTGCCTCGCCCCGGCGGGGCGCGACAATAAGATTCATCGCCAATGAATGTTAAGATCGGCCGACGGCCCCGGCGCTC
TTCGCCAGCCGCCTCCTGGC

Downstream 100 bases:

>100_bases
GACACGCCGGCCCGGTCCGGGCGCAGACGCCTCCCGGCGTCACCAGATTTGACAGTCGAACTCGGCCTGGCGGCGCACAC
TGCTGTGTCACGCCACCCGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 172; Mature: 172

Protein sequence:

>172_residues
MRLTDYTDYSLRTLIYVAVHPDVLVTIQQIADAFGIPKNHLIKIVQGLGQNGFLHTVRGRAGGITLGRPAVEINIGDVVR
ATEPDFSLVECFHVNDNHCIITRVCGLRGVLAAALQAYFEVLDTYTLQDLIERPAALNRVLAEGVAVPMPQSGKGRTPKA
APAAGSRTRKSG

Sequences:

>Translated_172_residues
MRLTDYTDYSLRTLIYVAVHPDVLVTIQQIADAFGIPKNHLIKIVQGLGQNGFLHTVRGRAGGITLGRPAVEINIGDVVR
ATEPDFSLVECFHVNDNHCIITRVCGLRGVLAAALQAYFEVLDTYTLQDLIERPAALNRVLAEGVAVPMPQSGKGRTPKA
APAAGSRTRKSG
>Mature_172_residues
MRLTDYTDYSLRTLIYVAVHPDVLVTIQQIADAFGIPKNHLIKIVQGLGQNGFLHTVRGRAGGITLGRPAVEINIGDVVR
ATEPDFSLVECFHVNDNHCIITRVCGLRGVLAAALQAYFEVLDTYTLQDLIERPAALNRVLAEGVAVPMPQSGKGRTPKA
APAAGSRTRKSG

Specific function: Nitric oxide-responsive transcriptional regulator [H]

COG id: COG1959

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH rrf2-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1790621, Length=142, Percent_Identity=44.3661971830986, Blast_Score=124, Evalue=2e-30,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000944
- InterPro:   IPR011991 [H]

Pfam domain/function: PF02082 Rrf2 [H]

EC number: NA

Molecular weight: Translated: 18573; Mature: 18573

Theoretical pI: Translated: 8.84; Mature: 8.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLTDYTDYSLRTLIYVAVHPDVLVTIQQIADAFGIPKNHLIKIVQGLGQNGFLHTVRGR
CCCCCCCCCCEEEEEEEEECCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCEEEECCC
AGGITLGRPAVEINIGDVVRATEPDFSLVECFHVNDNHCIITRVCGLRGVLAAALQAYFE
CCCEEECCCEEEEECCCEEECCCCCCCEEEEEECCCCCEEEEHHHHHHHHHHHHHHHHHH
VLDTYTLQDLIERPAALNRVLAEGVAVPMPQSGKGRTPKAAPAAGSRTRKSG
HHHHHHHHHHHHCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MRLTDYTDYSLRTLIYVAVHPDVLVTIQQIADAFGIPKNHLIKIVQGLGQNGFLHTVRGR
CCCCCCCCCCEEEEEEEEECCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCEEEECCC
AGGITLGRPAVEINIGDVVRATEPDFSLVECFHVNDNHCIITRVCGLRGVLAAALQAYFE
CCCEEECCCEEEEECCCEEECCCCCCCEEEEEECCCCCEEEEHHHHHHHHHHHHHHHHHH
VLDTYTLQDLIERPAALNRVLAEGVAVPMPQSGKGRTPKAAPAAGSRTRKSG
HHHHHHHHHHHHCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA