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The map label for this gene is yfhI [H]

Identifier: 17548117

GI number: 17548117

Start: 3669111

End: 3670376

Strand: Reverse

Name: yfhI [H]

Synonym: RSc3400

Alternate gene names: 17548117

Gene position: 3670376-3669111 (Counterclockwise)

Preceding gene: 17548119

Following gene: 17548114

Centisome position: 98.76

GC content: 70.22

Gene sequence:

>1266_bases
ATGCCCCCTCTCGCCCCCCAACACGAGCGCCGCCTGCTGTGGCTGCTGGCGCTGACCCAATTCACCATCATCATGGACTT
CATGGTGATGATGCCGCTCGGGCCCCAGATCATGCACACCTTCGGCATCGGCCCGGCGGCGTTCGCCGCGGCGGTGTCGG
CGTATTCGTGGTGCTCGGGCGCGTCCGGCCTGCTGGCGGCCACGTACATCGACCGCTTCGACCGGCGGCGCCTGCTGCTC
ACGGTGTATGCGCTGTTCTCGCTGTCCAACCTGGCCTGCGCGCTGGCGGGCACGTTTCCGCTGCTGCTGGCGGCGCGGGC
GTTTGCCGGGCTGTCGGGCGGGGTGCTGGGCGCGGTCATCCTGGCCATCGTGTCGGATGTGGTCCCGCCAGCGCGGCGGG
GCGCGGCCACCGGCGTGATCATGTCGTCGTTCGCGCTGGCGGCGGTGGCGGGGGTGCCGATCGGCATCGCGCTCGGTGCG
CACCTGGGGTGGGCGGCGCCGTTCTTCCTGCTGACCGCGCTGACGGCACTGTTCTGGCTGGGCGCGCGGCAGACGGTGCC
ACCGCTGACCGCACACCTGCGCGAGGACGGCCACTCGCTCGGCCAGATCCTCGGCGGGCTGTGGCAACTGCTGACCCATC
CGCACCACCTGCGCGCCTTCGTGCTGACCTTCGTGATGATGTCATCGCACATGATGGTGATTCCGTTCATCTCGCCGGTG
CTGGTGGCCAACCACGGCATCGCGCCGCAGGACCTGTCCTGGCTGTACGTGGCGGGCGGCGCGGCGACGTTCTTCACCTC
GCGCGCGGTCGGCAGGCTGGCCGACCGCTACGGCCGCCGCCGCGTGTTCGTGGCGGCCGCGCTGCTGTCGTTCATTCCCG
TGCTGGTGATGACGCATCTGCCGGCGTGGCCGTTCATCGGCATGCTGCTATTCTTCCCGTGCTTCATGGTGATCCTGTCG
AGCCGGATGGTGCCGATGCAGGCGCTGATGACCACGGTGCCGGCGCCGCAGGTGCGCGGGGCCTTCCTGTCGGCCAACAA
CGCGGTGATGTCGATCGGCACGGGCTGCGGAGCCTGGCTGGGCGGCCTGCTGCTGTCCACCGGCGCGGGCGGGCAGATCG
GCGGCTACGGCTTCAACGGCTGGGTGGCCGTGGTGGCTTCGCTGTTCTGCGTGCTGTGGATCCGCGGCATCAAAGGGTCG
GATGCGCATGGCGATCCGTCGATGCCGCACCAGGCCTGCGCCCCGGGCGAAACGGAACGGACCTGA

Upstream 100 bases:

>100_bases
CAAATATATCTTAAGATATATTCCTAGATTCAAGAATGGCCGACCTGCGGATCACGAGCCGCCCCGAGAAGCCACACGCT
TTCTGTCCGATACCTGCCCC

Downstream 100 bases:

>100_bases
CGCCATCACCACCAGGGGACGCGGCGGTTAAGCTCGGGGCCCGGAGGGCGTCAGCCGTCGCGTCCGTCAACGCGCGGCGC
GAGCAACCACGGCGTGTATT

Product: tranporter transmembrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 421; Mature: 420

Protein sequence:

>421_residues
MPPLAPQHERRLLWLLALTQFTIIMDFMVMMPLGPQIMHTFGIGPAAFAAAVSAYSWCSGASGLLAATYIDRFDRRRLLL
TVYALFSLSNLACALAGTFPLLLAARAFAGLSGGVLGAVILAIVSDVVPPARRGAATGVIMSSFALAAVAGVPIGIALGA
HLGWAAPFFLLTALTALFWLGARQTVPPLTAHLREDGHSLGQILGGLWQLLTHPHHLRAFVLTFVMMSSHMMVIPFISPV
LVANHGIAPQDLSWLYVAGGAATFFTSRAVGRLADRYGRRRVFVAAALLSFIPVLVMTHLPAWPFIGMLLFFPCFMVILS
SRMVPMQALMTTVPAPQVRGAFLSANNAVMSIGTGCGAWLGGLLLSTGAGGQIGGYGFNGWVAVVASLFCVLWIRGIKGS
DAHGDPSMPHQACAPGETERT

Sequences:

>Translated_421_residues
MPPLAPQHERRLLWLLALTQFTIIMDFMVMMPLGPQIMHTFGIGPAAFAAAVSAYSWCSGASGLLAATYIDRFDRRRLLL
TVYALFSLSNLACALAGTFPLLLAARAFAGLSGGVLGAVILAIVSDVVPPARRGAATGVIMSSFALAAVAGVPIGIALGA
HLGWAAPFFLLTALTALFWLGARQTVPPLTAHLREDGHSLGQILGGLWQLLTHPHHLRAFVLTFVMMSSHMMVIPFISPV
LVANHGIAPQDLSWLYVAGGAATFFTSRAVGRLADRYGRRRVFVAAALLSFIPVLVMTHLPAWPFIGMLLFFPCFMVILS
SRMVPMQALMTTVPAPQVRGAFLSANNAVMSIGTGCGAWLGGLLLSTGAGGQIGGYGFNGWVAVVASLFCVLWIRGIKGS
DAHGDPSMPHQACAPGETERT
>Mature_420_residues
PPLAPQHERRLLWLLALTQFTIIMDFMVMMPLGPQIMHTFGIGPAAFAAAVSAYSWCSGASGLLAATYIDRFDRRRLLLT
VYALFSLSNLACALAGTFPLLLAARAFAGLSGGVLGAVILAIVSDVVPPARRGAATGVIMSSFALAAVAGVPIGIALGAH
LGWAAPFFLLTALTALFWLGARQTVPPLTAHLREDGHSLGQILGGLWQLLTHPHHLRAFVLTFVMMSSHMMVIPFISPVL
VANHGIAPQDLSWLYVAGGAATFFTSRAVGRLADRYGRRRVFVAAALLSFIPVLVMTHLPAWPFIGMLLFFPCFMVILSS
RMVPMQALMTTVPAPQVRGAFLSANNAVMSIGTGCGAWLGGLLLSTGAGGQIGGYGFNGWVAVVASLFCVLWIRGIKGSD
AHGDPSMPHQACAPGETERT

Specific function: Unknown

COG id: COG2814

COG function: function code G; Arabinose efflux permease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 44588; Mature: 44456

Theoretical pI: Translated: 10.08; Mature: 10.08

Prosite motif: PS50850 MFS ; PS00216 SUGAR_TRANSPORT_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPPLAPQHERRLLWLLALTQFTIIMDFMVMMPLGPQIMHTFGIGPAAFAAAVSAYSWCSG
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHHHHCC
ASGLLAATYIDRFDRRRLLLTVYALFSLSNLACALAGTFPLLLAARAFAGLSGGVLGAVI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
LAIVSDVVPPARRGAATGVIMSSFALAAVAGVPIGIALGAHLGWAAPFFLLTALTALFWL
HHHHHHCCCCHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
GARQTVPPLTAHLREDGHSLGQILGGLWQLLTHPHHLRAFVLTFVMMSSHMMVIPFISPV
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCEEHHHHHHH
LVANHGIAPQDLSWLYVAGGAATFFTSRAVGRLADRYGRRRVFVAAALLSFIPVLVMTHL
HHHCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHC
PAWPFIGMLLFFPCFMVILSSRMVPMQALMTTVPAPQVRGAFLSANNAVMSIGTGCGAWL
CHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHCCHHEECCCCEEECCCCHHHHH
GGLLLSTGAGGQIGGYGFNGWVAVVASLFCVLWIRGIKGSDAHGDPSMPHQACAPGETER
HHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC
T
C
>Mature Secondary Structure 
PPLAPQHERRLLWLLALTQFTIIMDFMVMMPLGPQIMHTFGIGPAAFAAAVSAYSWCSG
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHHHHCC
ASGLLAATYIDRFDRRRLLLTVYALFSLSNLACALAGTFPLLLAARAFAGLSGGVLGAVI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
LAIVSDVVPPARRGAATGVIMSSFALAAVAGVPIGIALGAHLGWAAPFFLLTALTALFWL
HHHHHHCCCCHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
GARQTVPPLTAHLREDGHSLGQILGGLWQLLTHPHHLRAFVLTFVMMSSHMMVIPFISPV
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCEEHHHHHHH
LVANHGIAPQDLSWLYVAGGAATFFTSRAVGRLADRYGRRRVFVAAALLSFIPVLVMTHL
HHHCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHC
PAWPFIGMLLFFPCFMVILSSRMVPMQALMTTVPAPQVRGAFLSANNAVMSIGTGCGAWL
CHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHCCHHEECCCCEEECCCCHHHHH
GGLLLSTGAGGQIGGYGFNGWVAVVASLFCVLWIRGIKGSDAHGDPSMPHQACAPGETER
HHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC
T
C

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8946165; 9384377 [H]