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The map label for this gene is 17548070

Identifier: 17548070

GI number: 17548070

Start: 3614086

End: 3614847

Strand: Reverse

Name: 17548070

Synonym: RSc3353

Alternate gene names: NA

Gene position: 3614847-3614086 (Counterclockwise)

Preceding gene: 17548071

Following gene: 17548069

Centisome position: 97.27

GC content: 71.65

Gene sequence:

>762_bases
ATGGTCGAAGGTCACACCACGCAGCCGGCGCGTGCGGGCGGCTACGGCATGCCGGCACGGGTGCGCGCGTGGTGGGTGGC
GGCCGCGGTGGCCGGCGTGACCTATGGCGGCATGCTGACCATGGTGGCCGTGGAGGTGGGGCCCGGCACGCCGCTGGCCG
GCCGCATCGTCGCCCAGCCGCTGTGGAAGATGCTGATGGCGCTGCTGCTGGCCCGCGCGGCATCGTTGCACGAGATGCCG
CGCGAGCGCCGCTGGCTGATCGGCGCCTTGCTGTTCTGCGCGCTGGGCGATCTCCTGCTGGCGCTGCCGGGGCTGCGGAT
TGCCTTCGTCGCCGGCTTGGCGTCGTTCCTGTTCGCCCATCTGTGCTATCTGCGCGTGCTGGTGACGCTGCGCGGCGCGT
GTTCGCCGCTGCGGCTGATCGGCGTGGGCGCGACACTGGGCGTGGCGATCGGCATGCTGAACTGGTACTGGCCGGGCCTG
GGCGTACTGAGCGGACCGGTGGTCGCCTACGTGATCGTCCTGTCGGCCATGGTCTGCGCGGCGTTGCTCGCGCGGCTGCC
CGGGCCCCTGACCGCCTGGGGTGCCGTGGCCTTCGCCGCCTCCGACGCGATGATCGGCATCAGTGTCTTTGTGTTTCCGT
TCAACGACTACGAGCTGGCGATCTGGTGGAGCTATGCCGCCGCCCAACTGCTGATCACCGCTGGCCTGCTGACCCGCCGC
GCGCCGCCGCCGCGCTGCACCATGCCGGCCGCCTCGGCGTAA

Upstream 100 bases:

>100_bases
GCCGTTGGCTCACCTGGGCGGGTAGGCTGGTCCGGCCGATGCCTTGCGCGAGGGTGCGCGACGTGTCACGCTGCATCCGT
CATTGAAGGGGGAGACGACG

Downstream 100 bases:

>100_bases
GTTGCCGCTGTCTTTTCCCTCCCGACGGAGCTGTCATGCTGCAGACCCTGGACGCGACTGCCACGGCGGCGCGCTTGCCG
TATGTCGCCCTGGCCGATGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 253; Mature: 253

Protein sequence:

>253_residues
MVEGHTTQPARAGGYGMPARVRAWWVAAAVAGVTYGGMLTMVAVEVGPGTPLAGRIVAQPLWKMLMALLLARAASLHEMP
RERRWLIGALLFCALGDLLLALPGLRIAFVAGLASFLFAHLCYLRVLVTLRGACSPLRLIGVGATLGVAIGMLNWYWPGL
GVLSGPVVAYVIVLSAMVCAALLARLPGPLTAWGAVAFAASDAMIGISVFVFPFNDYELAIWWSYAAAQLLITAGLLTRR
APPPRCTMPAASA

Sequences:

>Translated_253_residues
MVEGHTTQPARAGGYGMPARVRAWWVAAAVAGVTYGGMLTMVAVEVGPGTPLAGRIVAQPLWKMLMALLLARAASLHEMP
RERRWLIGALLFCALGDLLLALPGLRIAFVAGLASFLFAHLCYLRVLVTLRGACSPLRLIGVGATLGVAIGMLNWYWPGL
GVLSGPVVAYVIVLSAMVCAALLARLPGPLTAWGAVAFAASDAMIGISVFVFPFNDYELAIWWSYAAAQLLITAGLLTRR
APPPRCTMPAASA
>Mature_253_residues
MVEGHTTQPARAGGYGMPARVRAWWVAAAVAGVTYGGMLTMVAVEVGPGTPLAGRIVAQPLWKMLMALLLARAASLHEMP
RERRWLIGALLFCALGDLLLALPGLRIAFVAGLASFLFAHLCYLRVLVTLRGACSPLRLIGVGATLGVAIGMLNWYWPGL
GVLSGPVVAYVIVLSAMVCAALLARLPGPLTAWGAVAFAASDAMIGISVFVFPFNDYELAIWWSYAAAQLLITAGLLTRR
APPPRCTMPAASA

Specific function: Unknown

COG id: COG3714

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the TMEM86 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012506 [H]

Pfam domain/function: PF07947 YhhN [H]

EC number: NA

Molecular weight: Translated: 26668; Mature: 26668

Theoretical pI: Translated: 9.98; Mature: 9.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
6.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVEGHTTQPARAGGYGMPARVRAWWVAAAVAGVTYGGMLTMVAVEVGPGTPLAGRIVAQP
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHEEHHEEECCCCCCHHHHHHHHH
LWKMLMALLLARAASLHEMPRERRWLIGALLFCALGDLLLALPGLRIAFVAGLASFLFAH
HHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
LCYLRVLVTLRGACSPLRLIGVGATLGVAIGMLNWYWPGLGVLSGPVVAYVIVLSAMVCA
HHHHHHHHHHHCCCCCHHHEECHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
ALLARLPGPLTAWGAVAFAASDAMIGISVFVFPFNDYELAIWWSYAAAQLLITAGLLTRR
HHHHHCCCCHHHHHHHHHHHCCCEEEEEEEEEECCCCEEEEEHHHHHHHHHHHHHHHHCC
APPPRCTMPAASA
CCCCCCCCCCCCC
>Mature Secondary Structure
MVEGHTTQPARAGGYGMPARVRAWWVAAAVAGVTYGGMLTMVAVEVGPGTPLAGRIVAQP
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHEEHHEEECCCCCCHHHHHHHHH
LWKMLMALLLARAASLHEMPRERRWLIGALLFCALGDLLLALPGLRIAFVAGLASFLFAH
HHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
LCYLRVLVTLRGACSPLRLIGVGATLGVAIGMLNWYWPGLGVLSGPVVAYVIVLSAMVCA
HHHHHHHHHHHCCCCCHHHEECHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
ALLARLPGPLTAWGAVAFAASDAMIGISVFVFPFNDYELAIWWSYAAAQLLITAGLLTRR
HHHHHCCCCHHHHHHHHHHHCCCEEEEEEEEEECCCCEEEEEHHHHHHHHHHHHHHHHCC
APPPRCTMPAASA
CCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]