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The map label for this gene is bkdR [H]

Identifier: 17548071

GI number: 17548071

Start: 3614923

End: 3615399

Strand: Reverse

Name: bkdR [H]

Synonym: RSc3354

Alternate gene names: 17548071

Gene position: 3615399-3614923 (Counterclockwise)

Preceding gene: 17548074

Following gene: 17548070

Centisome position: 97.28

GC content: 66.46

Gene sequence:

>477_bases
ATGATTTCTCTCGATCCCTTTGATCTGGCCCTGCTTGCCGCCCTTCAGCGCGACGGCCGTGCGACCCACCAGCAGCTCTC
GGAGCAGGTCCACCTGTCGGCCAGCCAGGTCGGGCGCCGGCTCGCGCGGCTGGAGGCGGAACGGATCATCGAGGGCTACC
GCGTGATCCTGTCACCGACGGGGCTGGGCCTGGGCGTGACCGTTTTCGCCAGCGTCAAGCTCGCCCATCACGGCGATGCC
ATCGTCGAGCGGTTCCGCGAAGAGATCCTGCTGCTCGATGCCGTCCAGGAGTGCTATTCGGTGGCCGGCGATGCTGACTA
CATGCTGCGCGTGGTCGTGCCGGATCTGCCGGCGCTGTCGGAATTCGTGATGCGCAAGCTGATGCGGGTGCCGGGCGTGG
ACAATGTCCGCTCCAATATCGTGCTGACGGCACTCAAGCGCGACGGCGCTCTGCCGTTGGCTCACCTGGGCGGGTAG

Upstream 100 bases:

>100_bases
GTAGGGGCGGGGCCGCGCGGATTGACCGCAAAACCGGCGCCATTCGCGCGTTGTTTGCAGATTTCATGCAAAATCCTGCT
TATCTTCGCAGGAGAATTGC

Downstream 100 bases:

>100_bases
GCTGGTCCGGCCGATGCCTTGCGCGAGGGTGCGCGACGTGTCACGCTGCATCCGTCATTGAAGGGGGAGACGACGATGGT
CGAAGGTCACACCACGCAGC

Product: transcription regulator protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 158; Mature: 158

Protein sequence:

>158_residues
MISLDPFDLALLAALQRDGRATHQQLSEQVHLSASQVGRRLARLEAERIIEGYRVILSPTGLGLGVTVFASVKLAHHGDA
IVERFREEILLLDAVQECYSVAGDADYMLRVVVPDLPALSEFVMRKLMRVPGVDNVRSNIVLTALKRDGALPLAHLGG

Sequences:

>Translated_158_residues
MISLDPFDLALLAALQRDGRATHQQLSEQVHLSASQVGRRLARLEAERIIEGYRVILSPTGLGLGVTVFASVKLAHHGDA
IVERFREEILLLDAVQECYSVAGDADYMLRVVVPDLPALSEFVMRKLMRVPGVDNVRSNIVLTALKRDGALPLAHLGG
>Mature_158_residues
MISLDPFDLALLAALQRDGRATHQQLSEQVHLSASQVGRRLARLEAERIIEGYRVILSPTGLGLGVTVFASVKLAHHGDA
IVERFREEILLLDAVQECYSVAGDADYMLRVVVPDLPALSEFVMRKLMRVPGVDNVRSNIVLTALKRDGALPLAHLGG

Specific function: Positive regulator of the bkd operon for branched-chain keto acid dehydrogenase complex [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH asnC-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1787116, Length=148, Percent_Identity=35.1351351351351, Blast_Score=103, Evalue=6e-24,
Organism=Escherichia coli, GI87081742, Length=150, Percent_Identity=35.3333333333333, Blast_Score=96, Evalue=9e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011008
- InterPro:   IPR000485
- InterPro:   IPR019885
- InterPro:   IPR019888
- InterPro:   IPR019887
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01037 AsnC_trans_reg [H]

EC number: NA

Molecular weight: Translated: 17261; Mature: 17261

Theoretical pI: Translated: 6.68; Mature: 6.68

Prosite motif: PS50956 HTH_ASNC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISLDPFDLALLAALQRDGRATHQQLSEQVHLSASQVGRRLARLEAERIIEGYRVILSPT
CCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHEECCC
GLGLGVTVFASVKLAHHGDAIVERFREEILLLDAVQECYSVAGDADYMLRVVVPDLPALS
CCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHEEEECCCCCCHHH
EFVMRKLMRVPGVDNVRSNIVLTALKRDGALPLAHLGG
HHHHHHHHHCCCCCCCHHHHEEEEECCCCCCCCCCCCC
>Mature Secondary Structure
MISLDPFDLALLAALQRDGRATHQQLSEQVHLSASQVGRRLARLEAERIIEGYRVILSPT
CCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHEECCC
GLGLGVTVFASVKLAHHGDAIVERFREEILLLDAVQECYSVAGDADYMLRVVVPDLPALS
CCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHEEEECCCCCCHHH
EFVMRKLMRVPGVDNVRSNIVLTALKRDGALPLAHLGG
HHHHHHHHHCCCCCCCHHHHEEEEECCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8320210 [H]