| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
Click here to switch to the map view.
The map label for this gene is 17547987
Identifier: 17547987
GI number: 17547987
Start: 3521585
End: 3521854
Strand: Direct
Name: 17547987
Synonym: RSc3270
Alternate gene names: NA
Gene position: 3521585-3521854 (Clockwise)
Preceding gene: 17547986
Following gene: 17547989
Centisome position: 94.76
GC content: 64.44
Gene sequence:
>270_bases ATGCGATTTTCCCGTGACGCGTTAGATACGCACCATCTGCGGGCGATGACGGAGCGCTTGCATTGGCATCGCAGGACATC CGCCAAGGCGGTTTCGCTCGACGCGCGCGCGCATTCGCATCTGCACCGCGCCCGCGGCGACGAGAGCGACGATGCGGAAG TCATGAAGGTCACTGCGGTCTCGACCGCGGTGGCGCTGGCAGTGGTGCTGGTTGCCATGCTGGCGATCGGATTCGGGTCG GAACTGGCCCGATGGATGGGCCTGGAATGA
Upstream 100 bases:
>100_bases GCATACGTCATTTGCATGCCGTATCGTCATCGGGCCGCACGTACTCCGACGCCGGTGCGTGCCGGCGTCGGTCATCACAC GAACGGCGGGAGGAACAGCG
Downstream 100 bases:
>100_bases TCCGGTGCCCGTGCGCGTCTTGACGGACGCAGCCCCGGCCCTCGCGCAAGGCGAATGGCCACCCCTGAACGGCCTGTCCG GCGGAAGCCGGCAGGCCGTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 89; Mature: 89
Protein sequence:
>89_residues MRFSRDALDTHHLRAMTERLHWHRRTSAKAVSLDARAHSHLHRARGDESDDAEVMKVTAVSTAVALAVVLVAMLAIGFGS ELARWMGLE
Sequences:
>Translated_89_residues MRFSRDALDTHHLRAMTERLHWHRRTSAKAVSLDARAHSHLHRARGDESDDAEVMKVTAVSTAVALAVVLVAMLAIGFGS ELARWMGLE >Mature_89_residues MRFSRDALDTHHLRAMTERLHWHRRTSAKAVSLDARAHSHLHRARGDESDDAEVMKVTAVSTAVALAVVLVAMLAIGFGS ELARWMGLE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9902; Mature: 9902
Theoretical pI: Translated: 9.52; Mature: 9.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.6 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 5.6 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRFSRDALDTHHLRAMTERLHWHRRTSAKAVSLDARAHSHLHRARGDESDDAEVMKVTAV CCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH STAVALAVVLVAMLAIGFGSELARWMGLE HHHHHHHHHHHHHHHHCCCHHHHHHHCCC >Mature Secondary Structure MRFSRDALDTHHLRAMTERLHWHRRTSAKAVSLDARAHSHLHRARGDESDDAEVMKVTAV CCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH STAVALAVVLVAMLAIGFGSELARWMGLE HHHHHHHHHHHHHHHHCCCHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA