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The map label for this gene is 17547986

Identifier: 17547986

GI number: 17547986

Start: 3520630

End: 3521310

Strand: Direct

Name: 17547986

Synonym: RSc3269

Alternate gene names: NA

Gene position: 3520630-3521310 (Clockwise)

Preceding gene: 17547985

Following gene: 17547987

Centisome position: 94.73

GC content: 69.75

Gene sequence:

>681_bases
ATGAGCGACGATACCGCCGCGGACGCCGCCCCGGTCGACAAGCCCCGCCGCAAGCGCGGCAACCAGCCGCCCGACACCCG
GCCGGAAATCTACGTCAGCACCGACATCGAGGCCGACGGACCGATCCCCGGACCGCATTCGATGCTGAGCTTCGCCAGCG
CGGCCTACCTCGCCGACAAGACGCTGGTGGGCACCTTCGAGGCCAACCTCGAGACGCTGCCGGGCGCCGAAGGGCATCCG
ATCCAGATGCAGTGGTGGGCGCAGCAGCCCGAGGCATGGGCCGCCTGCCGGCGCGACCTGGAGGCGCCCGAGGCGGCGCT
GCCGCGCTACGTGGAATGGGTCGAGAGCCTGCCCGGCAAGCCGGTCTTCGTGGCCTTTCCGGCCGGCTTCGATTTCACCT
TCATGTTCTGGTACATGATGCGGTTTGCCGGCCGCTCGCCGTTCGGCTGGGCGGCGCTCGACATCAAGACGCTGGCCTTT
GCGCTGACCGGCCTGCCGTACCGGCGCAACGTCAAGGCGGCCTTTCCCGCGCAGTGGCACGACCCGCTGCCGCACACGCA
TATCGCGCTGGACGATGCGAAGGAGCAAGGCGCGCTCTTCTGCAACATGCTGGCCGAGCTGCGCCGCCGCGAGACGGAGC
AGGCAACGCAGAAGGCCGCCGCGCAGCCCACGCAAGACTGA

Upstream 100 bases:

>100_bases
TGACCTTCGTGCCGGGCCACGGCCCCGTTTCCACCTTCGGCGACGAGCGCGCGACCAATCCGTATGTCGCCGACCGCCTG
TTCGCCGATGAGGGCACCGC

Downstream 100 bases:

>100_bases
GCGCCGCACGCATCACCCGCAAACCCAAGAGCAGCGCGGCACCAGCGTCTTCCCTGCGTGACGCGCTCACCATGCGGCGC
CGCAACTTGCGGGGTCCGCT

Product: hypothetical protein

Products: NA

Alternate protein names: Exonuclease RNAse T And DNA Polymerase III

Number of amino acids: Translated: 226; Mature: 225

Protein sequence:

>226_residues
MSDDTAADAAPVDKPRRKRGNQPPDTRPEIYVSTDIEADGPIPGPHSMLSFASAAYLADKTLVGTFEANLETLPGAEGHP
IQMQWWAQQPEAWAACRRDLEAPEAALPRYVEWVESLPGKPVFVAFPAGFDFTFMFWYMMRFAGRSPFGWAALDIKTLAF
ALTGLPYRRNVKAAFPAQWHDPLPHTHIALDDAKEQGALFCNMLAELRRRETEQATQKAAAQPTQD

Sequences:

>Translated_226_residues
MSDDTAADAAPVDKPRRKRGNQPPDTRPEIYVSTDIEADGPIPGPHSMLSFASAAYLADKTLVGTFEANLETLPGAEGHP
IQMQWWAQQPEAWAACRRDLEAPEAALPRYVEWVESLPGKPVFVAFPAGFDFTFMFWYMMRFAGRSPFGWAALDIKTLAF
ALTGLPYRRNVKAAFPAQWHDPLPHTHIALDDAKEQGALFCNMLAELRRRETEQATQKAAAQPTQD
>Mature_225_residues
SDDTAADAAPVDKPRRKRGNQPPDTRPEIYVSTDIEADGPIPGPHSMLSFASAAYLADKTLVGTFEANLETLPGAEGHPI
QMQWWAQQPEAWAACRRDLEAPEAALPRYVEWVESLPGKPVFVAFPAGFDFTFMFWYMMRFAGRSPFGWAALDIKTLAFA
LTGLPYRRNVKAAFPAQWHDPLPHTHIALDDAKEQGALFCNMLAELRRRETEQATQKAAAQPTQD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25173; Mature: 25041

Theoretical pI: Translated: 5.10; Mature: 5.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDDTAADAAPVDKPRRKRGNQPPDTRPEIYVSTDIEADGPIPGPHSMLSFASAAYLADK
CCCCCCCCCCCCCCHHHHCCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHCC
TLVGTFEANLETLPGAEGHPIQMQWWAQQPEAWAACRRDLEAPEAALPRYVEWVESLPGK
CEEEEECCCHHHCCCCCCCCEEEEEECCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCCC
PVFVAFPAGFDFTFMFWYMMRFAGRSPFGWAALDIKTLAFALTGLPYRRNVKAAFPAQWH
EEEEEECCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
DPLPHTHIALDDAKEQGALFCNMLAELRRRETEQATQKAAAQPTQD
CCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
SDDTAADAAPVDKPRRKRGNQPPDTRPEIYVSTDIEADGPIPGPHSMLSFASAAYLADK
CCCCCCCCCCCCCHHHHCCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHCC
TLVGTFEANLETLPGAEGHPIQMQWWAQQPEAWAACRRDLEAPEAALPRYVEWVESLPGK
CEEEEECCCHHHCCCCCCCCEEEEEECCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCCC
PVFVAFPAGFDFTFMFWYMMRFAGRSPFGWAALDIKTLAFALTGLPYRRNVKAAFPAQWH
EEEEEECCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
DPLPHTHIALDDAKEQGALFCNMLAELRRRETEQATQKAAAQPTQD
CCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA