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The map label for this gene is yegM [C]

Identifier: 17547925

GI number: 17547925

Start: 3467878

End: 3468993

Strand: Reverse

Name: yegM [C]

Synonym: RSc3206

Alternate gene names: 17547925

Gene position: 3468993-3467878 (Counterclockwise)

Preceding gene: 17547926

Following gene: 17547924

Centisome position: 93.34

GC content: 67.29

Gene sequence:

>1116_bases
ATGCTTTCGCGTCGCTTTGTTACCTCTACCGTTATTTGTGCGTTGCCGCTGGCGTTGAGCGCTTGCGGCGAAAAGGCCCC
CGCCGATCCGCGTACCGAGGCGCCCCTGGTGCGTGCCGCGTTCGTTCAGCCAGTTGCTTCGGCATCGCGTTCATTCACGG
GCGTCGTTGCTGCCAGGGTGCAGAGTGACCTCGGGTTCCGCGTGCCCGGCAAGGTGTTGGAACGGCTGGTGGATGCGGGG
CAAACCGTCAAGCGCGGGCAGCCGCTTATGCGCATCGACCCGGTCGATCTGAAGCTCGCCGCGCACGCACAGCAAGAAGC
CGTGAGCGCCGCGCGGGCACGCGCGCAACAGACGGCGGAAGACGAAGCCCGCTACCGCGATCTGCGCGGAACGGGCGCAA
TTTCCGCCTCGGCCTATGACCAGGCCAAGGCTGCGGCGGACGCGGCCAAAGCCCAGTTGAGCGCGGCGGAAGCGCAGGCT
GATGTTGCGCGTAACGCCAGCCGCTACGCAGAGCTCCTTGCCGATGGCGACGGCGTGGTCGTGGAAACGCTGGCCGAGCC
CGGCCAGGTCGTCAACGCGGGGCAGGCTGTTGTGCGCCTGGCCCACGCCGGCCGCCGTGAAGCGGTTGTCCAGTTGCCGG
AAACGTTGCGGCCGGCGATTGGCTCTGTCGCACAGGCCACGCTTTTCGGTGGGGAAAGCTCGGGCGTACCTGCCAAGCTG
CGGCAGCTGTCAGATGCTGCCGATCGGCTTACCCGCACCTTCGACGCACGCTATGTGCTGGATGGGGAACTGGCCAATGC
GCCGCTGGGCGCCACCGTGACGATCCAGATTCCCGATCGGCCGGCCACTGCGCAAGGCGATCTGCAGGTGCCGCTGGGTG
CCGTGTTCGATGCTGGCAAGGGCCCCGGCGTGTGGGTCATCCAGGGGGATCCGGCCAAGGTGTCGTGGCGATCCGTCACC
ATCGTGCGCCTCGGCGACGAAGGTGCTCGGGTTGCGGGCCAAGTCAAGCAAGGGGACCGGATCGTCGCGCTTGGCGCACA
ACTGCTGCGTGAAGGACAGCAAGTCCGTGTGGCAGGTCAGGGTGCCAGTACTGCCATCGCGGGGGTGCGCCTGTGA

Upstream 100 bases:

>100_bases
GTCTTTCTCCCTGACGCGCAGATTTTTCTTTGTGACCATTGACTAAATTGGTCACAAGAGCCAGAATGAAGGCCCAGATC
ATCTCGTCGATGGGGCTTTC

Downstream 100 bases:

>100_bases
GCCAAGGTCGTTTCAACCTATCGGCGCTCGCCGTGCGCGAGCGCGCCGTCACTCTGTTCCTCATCTGCCTGATCTCTCTG
GCGGGGCTCATTTCCTTCTT

Product: transport lipoprotein

Products: NA

Alternate protein names: Efflux Transporter RND Family MFP Subunit; Secretion Protein HlyD; RND Efflux Membrane Fusion Protein; Component Of Multidrug Efflux System; HlyD Family Secretion Protein; Transport/Efflux Transmembrane Protein; RND Family Mulitdrug Efflux Protein; Membrane-Fusion Protein; Efflux Protein; Protein Secretion Protein; Multidrug RND Transporter Membrane Fusion Protein; Cation/Multidrug Efflux System Mebrane-Fusion Component; Lipoprotein; Multidrug Efflux Transporter Protein; HlyD Family Protein Secretion Protein; Membrane Fusion Protein; Multidrug Efflux Protein; Efflux Transporter; Membrane Efflux Protein; AbgT Transporter; Component Of Multidrug Efflux Protein; Multidrug Efflux; Efflux Transporter RND Family; RND Membrane Fusion Protein; Efflux System Protein; Efflux Transmembrane Protein; HlyD-Family Secretion Protein; Component Of Multidrug Efflux System Protein; Auxiliary Transport Protein MFP Family; Protein Secretion Protein HlyD Family; RND Family Efflux Transporter Subunit MFP; Secretion Protein; RND Efflux Transporter; Periplasmic Multidrug Efflux Lipoprotein; Acriflavin Resistance Periplasmic Protein; Efflux Transporter Rnd Family Mfp Subunit; RND Superfamily Transporter Membrane- Fusion Protein; RND Family Efflux Transporter; Rnd Efflux Membrane Fusion Protein; RND/Acr Family Transmembrane Transporter

Number of amino acids: Translated: 371; Mature: 371

Protein sequence:

>371_residues
MLSRRFVTSTVICALPLALSACGEKAPADPRTEAPLVRAAFVQPVASASRSFTGVVAARVQSDLGFRVPGKVLERLVDAG
QTVKRGQPLMRIDPVDLKLAAHAQQEAVSAARARAQQTAEDEARYRDLRGTGAISASAYDQAKAAADAAKAQLSAAEAQA
DVARNASRYAELLADGDGVVVETLAEPGQVVNAGQAVVRLAHAGRREAVVQLPETLRPAIGSVAQATLFGGESSGVPAKL
RQLSDAADRLTRTFDARYVLDGELANAPLGATVTIQIPDRPATAQGDLQVPLGAVFDAGKGPGVWVIQGDPAKVSWRSVT
IVRLGDEGARVAGQVKQGDRIVALGAQLLREGQQVRVAGQGASTAIAGVRL

Sequences:

>Translated_371_residues
MLSRRFVTSTVICALPLALSACGEKAPADPRTEAPLVRAAFVQPVASASRSFTGVVAARVQSDLGFRVPGKVLERLVDAG
QTVKRGQPLMRIDPVDLKLAAHAQQEAVSAARARAQQTAEDEARYRDLRGTGAISASAYDQAKAAADAAKAQLSAAEAQA
DVARNASRYAELLADGDGVVVETLAEPGQVVNAGQAVVRLAHAGRREAVVQLPETLRPAIGSVAQATLFGGESSGVPAKL
RQLSDAADRLTRTFDARYVLDGELANAPLGATVTIQIPDRPATAQGDLQVPLGAVFDAGKGPGVWVIQGDPAKVSWRSVT
IVRLGDEGARVAGQVKQGDRIVALGAQLLREGQQVRVAGQGASTAIAGVRL
>Mature_371_residues
MLSRRFVTSTVICALPLALSACGEKAPADPRTEAPLVRAAFVQPVASASRSFTGVVAARVQSDLGFRVPGKVLERLVDAG
QTVKRGQPLMRIDPVDLKLAAHAQQEAVSAARARAQQTAEDEARYRDLRGTGAISASAYDQAKAAADAAKAQLSAAEAQA
DVARNASRYAELLADGDGVVVETLAEPGQVVNAGQAVVRLAHAGRREAVVQLPETLRPAIGSVAQATLFGGESSGVPAKL
RQLSDAADRLTRTFDARYVLDGELANAPLGATVTIQIPDRPATAQGDLQVPLGAVFDAGKGPGVWVIQGDPAKVSWRSVT
IVRLGDEGARVAGQVKQGDRIVALGAQLLREGQQVRVAGQGASTAIAGVRL

Specific function: Unknown

COG id: COG0845

COG function: function code M; Membrane-fusion protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38491; Mature: 38491

Theoretical pI: Translated: 9.76; Mature: 9.76

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSRRFVTSTVICALPLALSACGEKAPADPRTEAPLVRAAFVQPVASASRSFTGVVAARV
CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHH
QSDLGFRVPGKVLERLVDAGQTVKRGQPLMRIDPVDLKLAAHAQQEAVSAARARAQQTAE
HHCCCCCCCHHHHHHHHHCCCHHHCCCCCEEECCCCEEHHHHHHHHHHHHHHHHHHHHHH
DEARYRDLRGTGAISASAYDQAKAAADAAKAQLSAAEAQADVARNASRYAELLADGDGVV
HHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEE
VETLAEPGQVVNAGQAVVRLAHAGRREAVVQLPETLRPAIGSVAQATLFGGESSGVPAKL
EEECCCCCHHHHHHHHHHHHHHCCCHHHHHHCHHHHHHHHHHHHHHHEECCCCCCCCHHH
RQLSDAADRLTRTFDARYVLDGELANAPLGATVTIQIPDRPATAQGDLQVPLGAVFDAGK
HHHHHHHHHHHHHHCCEEEECCCCCCCCCCEEEEEEECCCCCCCCCCCCCCHHHHEECCC
GPGVWVIQGDPAKVSWRSVTIVRLGDEGARVAGQVKQGDRIVALGAQLLREGQQVRVAGQ
CCEEEEEECCCCEEEEEEEEEEEECCCCCHHHHHHCCCCEEEEHHHHHHHCCCEEEEECC
GASTAIAGVRL
CCCCCCCCCCC
>Mature Secondary Structure
MLSRRFVTSTVICALPLALSACGEKAPADPRTEAPLVRAAFVQPVASASRSFTGVVAARV
CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHH
QSDLGFRVPGKVLERLVDAGQTVKRGQPLMRIDPVDLKLAAHAQQEAVSAARARAQQTAE
HHCCCCCCCHHHHHHHHHCCCHHHCCCCCEEECCCCEEHHHHHHHHHHHHHHHHHHHHHH
DEARYRDLRGTGAISASAYDQAKAAADAAKAQLSAAEAQADVARNASRYAELLADGDGVV
HHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEE
VETLAEPGQVVNAGQAVVRLAHAGRREAVVQLPETLRPAIGSVAQATLFGGESSGVPAKL
EEECCCCCHHHHHHHHHHHHHHCCCHHHHHHCHHHHHHHHHHHHHHHEECCCCCCCCHHH
RQLSDAADRLTRTFDARYVLDGELANAPLGATVTIQIPDRPATAQGDLQVPLGAVFDAGK
HHHHHHHHHHHHHHCCEEEECCCCCCCCCCEEEEEEECCCCCCCCCCCCCCHHHHEECCC
GPGVWVIQGDPAKVSWRSVTIVRLGDEGARVAGQVKQGDRIVALGAQLLREGQQVRVAGQ
CCEEEEEECCCCEEEEEEEEEEEECCCCCHHHHHHCCCCEEEEHHHHHHHCCCEEEEECC
GASTAIAGVRL
CCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA