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The map label for this gene is 17547926

Identifier: 17547926

GI number: 17547926

Start: 3469080

End: 3469694

Strand: Reverse

Name: 17547926

Synonym: RSc3207

Alternate gene names: NA

Gene position: 3469694-3469080 (Counterclockwise)

Preceding gene: 17547929

Following gene: 17547925

Centisome position: 93.36

GC content: 60.81

Gene sequence:

>615_bases
ATGAAGACCACCCCTTACCCCGTTCCCGTCCGCGGCCCGGCGGACCATGACGTGCGAGACCAGATCGTTGCTGCCGCTAC
CGAGCACTTCAGCCGCTACGGCTACGAGAAGACCGCCGTTTCCGATCTGGCCAAGGCCATCGGTTTTTCCAAGGCCTATA
TCTACAAGTTCTTCGAGTCCAAGCAGGCCATTGGCGAGATGATTTGCGCCAACTGCCTGCGCGAGATTGAGGCCGACGTG
AGTGCCGCCCTGGCAGAGGCCGATTCACCGCCCGAAAAGCTCCGGCGCATGTTCAAAGCCTTGACTGAGGCGAGCCTTCG
GCTGTTTTCCCACGACCGCAAGCTGTACGAGATTGCGGCCTCGGCAGCGACTGAGCGCTGGCAAGCGGTAATCGCCTACG
AAGAGCGCATTCAGAAGGTGCTGCGCGATGTGCTGCAGGAGGGCCGGGAGACCGGAGACTTCGAGCGCAAGACGCCGTTG
GACGAGGCCACGACGGCTATCTACCTGGTCATGCGCCCGTACATGAATCCGTTGCTTTTGCAGTACAGCTTTGACTACAC
GGAAAGTGCGCCCGGGCTGCTCTCCAGCCTCGTGCTTCGGAGTCTTTCTCCCTGA

Upstream 100 bases:

>100_bases
CGTTTTGGCAACATGGGGTTCTTCCATCGGATTTTTAGTGACTATAGTACAAAATGGTCACAAGTTGTTCAACTATCGCG
ACTCGCGTAAGCTGGAGCCC

Downstream 100 bases:

>100_bases
CGCGCAGATTTTTCTTTGTGACCATTGACTAAATTGGTCACAAGAGCCAGAATGAAGGCCCAGATCATCTCGTCGATGGG
GCTTTCATGCTTTCGCGTCG

Product: transcription regulator protein

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family; Transcriptional Regulator; Regulatory Protein TetR; Transcriptional Regulator Protein TetR Family; TetR/AcrR Family Transcriptional Regulator; Transcriptional Activator; TetR-Family Transcriptional Regulatory Protein; Transcriptional Regulator Protein; HTH-Type Transcriptional Regulator Luxr

Number of amino acids: Translated: 204; Mature: 204

Protein sequence:

>204_residues
MKTTPYPVPVRGPADHDVRDQIVAAATEHFSRYGYEKTAVSDLAKAIGFSKAYIYKFFESKQAIGEMICANCLREIEADV
SAALAEADSPPEKLRRMFKALTEASLRLFSHDRKLYEIAASAATERWQAVIAYEERIQKVLRDVLQEGRETGDFERKTPL
DEATTAIYLVMRPYMNPLLLQYSFDYTESAPGLLSSLVLRSLSP

Sequences:

>Translated_204_residues
MKTTPYPVPVRGPADHDVRDQIVAAATEHFSRYGYEKTAVSDLAKAIGFSKAYIYKFFESKQAIGEMICANCLREIEADV
SAALAEADSPPEKLRRMFKALTEASLRLFSHDRKLYEIAASAATERWQAVIAYEERIQKVLRDVLQEGRETGDFERKTPL
DEATTAIYLVMRPYMNPLLLQYSFDYTESAPGLLSSLVLRSLSP
>Mature_204_residues
MKTTPYPVPVRGPADHDVRDQIVAAATEHFSRYGYEKTAVSDLAKAIGFSKAYIYKFFESKQAIGEMICANCLREIEADV
SAALAEADSPPEKLRRMFKALTEASLRLFSHDRKLYEIAASAATERWQAVIAYEERIQKVLRDVLQEGRETGDFERKTPL
DEATTAIYLVMRPYMNPLLLQYSFDYTESAPGLLSSLVLRSLSP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23009; Mature: 23009

Theoretical pI: Translated: 5.80; Mature: 5.80

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTTPYPVPVRGPADHDVRDQIVAAATEHFSRYGYEKTAVSDLAKAIGFSKAYIYKFFES
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHH
KQAIGEMICANCLREIEADVSAALAEADSPPEKLRRMFKALTEASLRLFSHDRKLYEIAA
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SAATERWQAVIAYEERIQKVLRDVLQEGRETGDFERKTPLDEATTAIYLVMRPYMNPLLL
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHH
QYSFDYTESAPGLLSSLVLRSLSP
HEECCCCCCCHHHHHHHHHHHCCC
>Mature Secondary Structure
MKTTPYPVPVRGPADHDVRDQIVAAATEHFSRYGYEKTAVSDLAKAIGFSKAYIYKFFES
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHH
KQAIGEMICANCLREIEADVSAALAEADSPPEKLRRMFKALTEASLRLFSHDRKLYEIAA
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SAATERWQAVIAYEERIQKVLRDVLQEGRETGDFERKTPLDEATTAIYLVMRPYMNPLLL
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHH
QYSFDYTESAPGLLSSLVLRSLSP
HEECCCCCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA