| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
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The map label for this gene is 17547895
Identifier: 17547895
GI number: 17547895
Start: 3434829
End: 3435293
Strand: Reverse
Name: 17547895
Synonym: RSc3176
Alternate gene names: NA
Gene position: 3435293-3434829 (Counterclockwise)
Preceding gene: 17547896
Following gene: 17547894
Centisome position: 92.44
GC content: 59.78
Gene sequence:
>465_bases ATGCCCGGGTTCAGTGTTTTGAAGGCCGCCCCCTCCCAGGCCACCGAGATTAGTCAGCTTATTCAAGGGCTCGCTCACTA CTTTCTGGGCGAGGCCAGCAGCGCGGCTGCGCAGCCCTTCCTCACGACTTTCGAGCCGGCCGCGATCGCCGCTCTCATCA CCGCCCCCGCTTGCAAATACTTCGTCGCTATGGAGTCCGGCTTGCTTGTTGGGGTATGCGCGCTAAAGGATCGCAAACAC ATCTATCACTTGTTTGTTGCGCCCGAGGCGCAAGGCCGGGGCGTTGCTCGCGCGCTGTGGGAGTACGCGCGTGCCGATGC TGAGTTGGACGGAGCTACTGGCAGCTTCACTGTCAACTCATCTCTCCACGCCGTACCTGTCTACGAAAGGCTCGGGTTCC ATGCGATTGACTCTGTGCAAGAGAGGAACGGTGTTCGGTTTGTGCCTATGGCGTCAGTACGTTGA
Upstream 100 bases:
>100_bases GCGCTACGCTTATCGCTCAGTGGCTCAAAATGGGCCAGAAGCCGTCGTAGGCGACAATACGACCTTCCGCTAATCCGCTC CAGCGAGAACAGCTTTGCAC
Downstream 100 bases:
>100_bases CTTGTCGAGGTCGCGGCTGCTCAAGACGCGGATGAGTCGTTCGACTGAATCACATCCGCATAGGTCACGGGGGCCGTATC CACGGCCTGCTGAAGCAACC
Product: hypothetical protein
Products: NA
Alternate protein names: Acetyltransferase; Acetyltransferase Family Protein
Number of amino acids: Translated: 154; Mature: 153
Protein sequence:
>154_residues MPGFSVLKAAPSQATEISQLIQGLAHYFLGEASSAAAQPFLTTFEPAAIAALITAPACKYFVAMESGLLVGVCALKDRKH IYHLFVAPEAQGRGVARALWEYARADAELDGATGSFTVNSSLHAVPVYERLGFHAIDSVQERNGVRFVPMASVR
Sequences:
>Translated_154_residues MPGFSVLKAAPSQATEISQLIQGLAHYFLGEASSAAAQPFLTTFEPAAIAALITAPACKYFVAMESGLLVGVCALKDRKH IYHLFVAPEAQGRGVARALWEYARADAELDGATGSFTVNSSLHAVPVYERLGFHAIDSVQERNGVRFVPMASVR >Mature_153_residues PGFSVLKAAPSQATEISQLIQGLAHYFLGEASSAAAQPFLTTFEPAAIAALITAPACKYFVAMESGLLVGVCALKDRKHI YHLFVAPEAQGRGVARALWEYARADAELDGATGSFTVNSSLHAVPVYERLGFHAIDSVQERNGVRFVPMASVR
Specific function: Unknown
COG id: COG0454
COG function: function code KR; Histone acetyltransferase HPA2 and related acetyltransferases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16452; Mature: 16321
Theoretical pI: Translated: 7.06; Mature: 7.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPGFSVLKAAPSQATEISQLIQGLAHYFLGEASSAAAQPFLTTFEPAAIAALITAPACKY CCCHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCHHCCCCHHCCCHHHHHHHHHHHHHHH FVAMESGLLVGVCALKDRKHIYHLFVAPEAQGRGVARALWEYARADAELDGATGSFTVNS HHHHCCCCEEEEEECCCCCEEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCEEECC SLHAVPVYERLGFHAIDSVQERNGVRFVPMASVR CCEEEEHHHHHCCHHHHHHHHCCCEEEEEECCCC >Mature Secondary Structure PGFSVLKAAPSQATEISQLIQGLAHYFLGEASSAAAQPFLTTFEPAAIAALITAPACKY CCHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCHHCCCCHHCCCHHHHHHHHHHHHHHH FVAMESGLLVGVCALKDRKHIYHLFVAPEAQGRGVARALWEYARADAELDGATGSFTVNS HHHHCCCCEEEEEECCCCCEEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCEEECC SLHAVPVYERLGFHAIDSVQERNGVRFVPMASVR CCEEEEHHHHHCCHHHHHHHHCCCEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA