Click here to switch to the map view.

The map label for this gene is 17547896

Identifier: 17547896

GI number: 17547896

Start: 3435451

End: 3435762

Strand: Reverse

Name: 17547896

Synonym: RSc3177

Alternate gene names: NA

Gene position: 3435762-3435451 (Counterclockwise)

Preceding gene: 17547897

Following gene: 17547895

Centisome position: 92.45

GC content: 55.45

Gene sequence:

>312_bases
ATGTTGGGGCGATTTCAAGGTGATGCTGGCCGTCGGCTGACGATCGATGCACTCATCACGCAAAAGTTGGTTGGCGGAAA
CCGCGATCTTGCGGAGCTTCTTGCCGACAAGGTGCAGCTTCTGGAGATAAATGCCGGTAGCGTTTTGATCGAACAAGGCG
CGTCAGAAAACGACCTGTACCTGATTTTCGCCGGGGCATTTGACATCGTCGTCAACAAGCGCCGCGTTGGTCGCAGGTTC
CCCAATGATCATGTCGGTGAGATGGCTGCGATTGAGCCGTCGCAGCCAAGAGCCGCGTCGGTATCCTTTTAG

Upstream 100 bases:

>100_bases
TTTGTTGGTGACCAAGGCAGCTTCCCACTCGGAGGTGTGCTGTTTTTGGAATTTTGGTCGCCTTCTGGTTCCAAATAAGC
GGTAACGTTGAGGAGGGAGC

Downstream 100 bases:

>100_bases
CTCCAGTGCCTCAATATACTGGATGGGCATACAGTTATTAGCGATATTGGTAAGGAAGCGCTACGCTTATCGCTCAGTGG
CTCAAAATGGGCCAGAAGCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 103; Mature: 103

Protein sequence:

>103_residues
MLGRFQGDAGRRLTIDALITQKLVGGNRDLAELLADKVQLLEINAGSVLIEQGASENDLYLIFAGAFDIVVNKRRVGRRF
PNDHVGEMAAIEPSQPRAASVSF

Sequences:

>Translated_103_residues
MLGRFQGDAGRRLTIDALITQKLVGGNRDLAELLADKVQLLEINAGSVLIEQGASENDLYLIFAGAFDIVVNKRRVGRRF
PNDHVGEMAAIEPSQPRAASVSF
>Mature_103_residues
MLGRFQGDAGRRLTIDALITQKLVGGNRDLAELLADKVQLLEINAGSVLIEQGASENDLYLIFAGAFDIVVNKRRVGRRF
PNDHVGEMAAIEPSQPRAASVSF

Specific function: Unknown

COG id: COG0664

COG function: function code T; cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11194; Mature: 11194

Theoretical pI: Translated: 5.85; Mature: 5.85

Prosite motif: PS50042 CNMP_BINDING_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLGRFQGDAGRRLTIDALITQKLVGGNRDLAELLADKVQLLEINAGSVLIEQGASENDLY
CCCCCCCCCCCEEEHHHHHHHHHCCCCCCHHHHHHHHEEEEEECCCEEEEECCCCCCCEE
LIFAGAFDIVVNKRRVGRRFPNDHVGEMAAIEPSQPRAASVSF
EEEECCEEEEECCHHHCCCCCCCCCCCEEEECCCCCCEECCCC
>Mature Secondary Structure
MLGRFQGDAGRRLTIDALITQKLVGGNRDLAELLADKVQLLEINAGSVLIEQGASENDLY
CCCCCCCCCCCEEEHHHHHHHHHCCCCCCHHHHHHHHEEEEEECCCEEEEECCCCCCCEE
LIFAGAFDIVVNKRRVGRRFPNDHVGEMAAIEPSQPRAASVSF
EEEECCEEEEECCHHHCCCCCCCCCCCEEEECCCCCCEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA