| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
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The map label for this gene is flbA [H]
Identifier: 17547883
GI number: 17547883
Start: 3423619
End: 3424782
Strand: Direct
Name: flbA [H]
Synonym: RSc3164
Alternate gene names: 17547883
Gene position: 3423619-3424782 (Clockwise)
Preceding gene: 17547882
Following gene: 17547884
Centisome position: 92.12
GC content: 69.5
Gene sequence:
>1164_bases ATGATGTCCGGCGCGCTGTCCGCGGTCCAGGCGATCGAGCACCAGGTCCGCCAGCTGCTCGCGGCCGGACGCTTCGAAGA AGCCGAAGCGCTGGTGCGCCCGCCGCTCGCCTCGGGCAGTGGGCCGCTCGTGCTATGGAAACTGCTGGCGGCGGCGCTCC GCCCGCAGGGACGCATCGCGGAAACGCGGGCCATCCAGGAGATGCTGGTGGCGCACGCGCCGGGCGACTTTCCGGCACGC TTCGATTTGTCCGAAACGCTGCTGCTGCTGGGCGAGTTCGAGCGCGGCTGGCGTGAATACCGCTACCGCTACAGTCTCGC GCACACGGCAGCCATCGAACGCAAGGTGCAGCGCCCGCGCTGGAGCGGCCAGCCCATCCCCGGCCAGACCCTGCTGATCC ACGATGAGCAGGGCTTTGGCGATACCTTCCAGTTCCTGCGGATGGTGCCGTGGGCCAAGGCACGCAGCGGCGCGCGCGTG ATCCTGGAGGTCAACGCGGAAACCCTGTCGCTCGCGCGGCGCAGCACGGGTTTCGATCACATTGTCGCGCGCGGCAGCCT GCCGCCTCCGTTCGACGCGCATTGCGAGTTGATGAGCCTGCCGATGGCAATGGGGCTGAAGCCGTCGGATCTTCCCGGAC CGGTTCCCTACCTGTCGGCCGACCCGCTGCGCATCGCCCAATGGCAGCAGCGGCTGGCCGGCCTGCCGCGACCGCTCGTC GCCCTGGTCTGGGCTGGCCGACCGACGCACTTCAACGACGCGAACCGTTCGCTGACACTGGCCCGGCTCGCGCCGTTGGC GCACCCGGGCGCCACGTTCCTGTCGATCCAGAAAGGTCCGGCGGCGGCGCAGTCGGCAGACCCGCCGCCGGGCATGTCGC TCGTGCCGCTGAGCGACGATATCCTCGATTTCGAGGATACGGCGGCGATTCTCTCCATCGCCGACCTCCTGATCTCGGTC GATTCGGCGCCGGTGCATCTCGCCGGCGCGCTGGGGCGCCCGGTCTGGGTCATGCTGCCGTTCGTACCGGACTGGCGATG GCTGCTGGAGCGAACCGATACGCCGTGGTATCCGGGCATGCGTCTTTTCCGCCAGCACGCGCGCGGGAACTGGGACGGCG TGCTATCCGCCATGGCGGGCGAGCTTGCCCGTCTTGCCGCGTGA
Upstream 100 bases:
>100_bases ACCAGGTGCGGCAGCCAATCTACACAACCTCGAAGGGTCGCTGGCAGGCGTATGCCGACTATCTCGGCCCGCTGCTGGAG GCACTTGGGGTCGAGGCGCC
Downstream 100 bases:
>100_bases AGGCGCACGGCCATGCTGAAGCCGGTGTCGACGCGATCAGGCGCCACGGACATTGCCGCCGGGCTGGCGGGCACCCTGCT GTTGATGAGCCTGATGAGCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 387; Mature: 387
Protein sequence:
>387_residues MMSGALSAVQAIEHQVRQLLAAGRFEEAEALVRPPLASGSGPLVLWKLLAAALRPQGRIAETRAIQEMLVAHAPGDFPAR FDLSETLLLLGEFERGWREYRYRYSLAHTAAIERKVQRPRWSGQPIPGQTLLIHDEQGFGDTFQFLRMVPWAKARSGARV ILEVNAETLSLARRSTGFDHIVARGSLPPPFDAHCELMSLPMAMGLKPSDLPGPVPYLSADPLRIAQWQQRLAGLPRPLV ALVWAGRPTHFNDANRSLTLARLAPLAHPGATFLSIQKGPAAAQSADPPPGMSLVPLSDDILDFEDTAAILSIADLLISV DSAPVHLAGALGRPVWVMLPFVPDWRWLLERTDTPWYPGMRLFRQHARGNWDGVLSAMAGELARLAA
Sequences:
>Translated_387_residues MMSGALSAVQAIEHQVRQLLAAGRFEEAEALVRPPLASGSGPLVLWKLLAAALRPQGRIAETRAIQEMLVAHAPGDFPAR FDLSETLLLLGEFERGWREYRYRYSLAHTAAIERKVQRPRWSGQPIPGQTLLIHDEQGFGDTFQFLRMVPWAKARSGARV ILEVNAETLSLARRSTGFDHIVARGSLPPPFDAHCELMSLPMAMGLKPSDLPGPVPYLSADPLRIAQWQQRLAGLPRPLV ALVWAGRPTHFNDANRSLTLARLAPLAHPGATFLSIQKGPAAAQSADPPPGMSLVPLSDDILDFEDTAAILSIADLLISV DSAPVHLAGALGRPVWVMLPFVPDWRWLLERTDTPWYPGMRLFRQHARGNWDGVLSAMAGELARLAA >Mature_387_residues MMSGALSAVQAIEHQVRQLLAAGRFEEAEALVRPPLASGSGPLVLWKLLAAALRPQGRIAETRAIQEMLVAHAPGDFPAR FDLSETLLLLGEFERGWREYRYRYSLAHTAAIERKVQRPRWSGQPIPGQTLLIHDEQGFGDTFQFLRMVPWAKARSGARV ILEVNAETLSLARRSTGFDHIVARGSLPPPFDAHCELMSLPMAMGLKPSDLPGPVPYLSADPLRIAQWQQRLAGLPRPLV ALVWAGRPTHFNDANRSLTLARLAPLAHPGATFLSIQKGPAAAQSADPPPGMSLVPLSDDILDFEDTAAILSIADLLISV DSAPVHLAGALGRPVWVMLPFVPDWRWLLERTDTPWYPGMRLFRQHARGNWDGVLSAMAGELARLAA
Specific function: Unknown
COG id: COG0457
COG function: function code R; FOG: TPR repeat
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 4 TPR repeats [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013026 - InterPro: IPR011990 - InterPro: IPR019734 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42432; Mature: 42432
Theoretical pI: Translated: 8.51; Mature: 8.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMSGALSAVQAIEHQVRQLLAAGRFEEAEALVRPPLASGSGPLVLWKLLAAALRPQGRIA CCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCHH ETRAIQEMLVAHAPGDFPARFDLSETLLLLGEFERGWREYRYRYSLAHTAAIERKVQRPR HHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC WSGQPIPGQTLLIHDEQGFGDTFQFLRMVPWAKARSGARVILEVNAETLSLARRSTGFDH CCCCCCCCCEEEEECCCCCCHHHHHHHHCCCHHCCCCCEEEEEECHHHHHHHHHCCCCHH IVARGSLPPPFDAHCELMSLPMAMGLKPSDLPGPVPYLSADPLRIAQWQQRLAGLPRPLV HEECCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCHH ALVWAGRPTHFNDANRSLTLARLAPLAHPGATFLSIQKGPAAAQSADPPPGMSLVPLSDD HEEECCCCCCCCCCCCEEEHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCCCEEEECCCC ILDFEDTAAILSIADLLISVDSAPVHLAGALGRPVWVMLPFVPDWRWLLERTDTPWYPGM CCCHHHHHHHHHHHHHHHHCCCCCEEEHHHCCCCEEEEECCCCCHHHHHHCCCCCCCCHH RLFRQHARGNWDGVLSAMAGELARLAA HHHHHHHCCCHHHHHHHHHHHHHHHCC >Mature Secondary Structure MMSGALSAVQAIEHQVRQLLAAGRFEEAEALVRPPLASGSGPLVLWKLLAAALRPQGRIA CCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCHH ETRAIQEMLVAHAPGDFPARFDLSETLLLLGEFERGWREYRYRYSLAHTAAIERKVQRPR HHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC WSGQPIPGQTLLIHDEQGFGDTFQFLRMVPWAKARSGARVILEVNAETLSLARRSTGFDH CCCCCCCCCEEEEECCCCCCHHHHHHHHCCCHHCCCCCEEEEEECHHHHHHHHHCCCCHH IVARGSLPPPFDAHCELMSLPMAMGLKPSDLPGPVPYLSADPLRIAQWQQRLAGLPRPLV HEECCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCHH ALVWAGRPTHFNDANRSLTLARLAPLAHPGATFLSIQKGPAAAQSADPPPGMSLVPLSDD HEEECCCCCCCCCCCCEEEHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCCCEEEECCCC ILDFEDTAAILSIADLLISVDSAPVHLAGALGRPVWVMLPFVPDWRWLLERTDTPWYPGM CCCHHHHHHHHHHHHHHHHCCCCCEEEHHHCCCCEEEEECCCCCHHHHHHCCCCCCCCHH RLFRQHARGNWDGVLSAMAGELARLAA HHHHHHHCCCHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9748431; 11259647; 1699845 [H]