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The map label for this gene is ycjP [C]

Identifier: 17547768

GI number: 17547768

Start: 3286322

End: 3287152

Strand: Direct

Name: ycjP [C]

Synonym: RSc3049

Alternate gene names: 17547768

Gene position: 3286322-3287152 (Clockwise)

Preceding gene: 17547767

Following gene: 17547769

Centisome position: 88.43

GC content: 63.3

Gene sequence:

>831_bases
ATGCGTAAGAACAACAACAACGAGCACAAGCGCAAGATCGCCCGCGCCATCACGCTGGTGGTGTACGTGGCATTCGCGGT
GCTGCCGCTGTACTGGATGCTGAGCATGTCGCTCAAGACCAACGAGGAGACGCTGGCCGGCTTCTCGCTGTGGCCCAGGC
TGATGACCTTCGACAACTACAAGGTCATCTTCACCGACCCGTCGTGGTACTGGGGCTACATCAACTCGATCCTCTACGTG
ACCATGAACACGGTGCTGTCGACCGTGGTGGCGCTGCCGGCGGCCTATGCCTTCTCGCGCTACCGCTTCCTGGGCGACAA
GCACATGTTCTTCTGGCTGCTGACCAACCGGATGACGCCGCCGGCGGTGTTCCTGCTGCCGTTCTTCCAGCTGTATTCGA
CGGTCGGCCTGATGGACACCCACCTGGGCGTGGCGCTGGCGCACATGCTGTTCAACGTGCCGCTGGCGGTGTGGATCCTG
GAAGGCTTCATGTCAGGCATCCCGCGCGAGATCGACGAGACGGCGTACATCGACGGCTACAGCTTCCCGGCCTTCTTCCT
GAAGATCTTCCTGCCGCTGATCAAGGCGGGCGTGGGCGTGACGGCGTTCTTCTGCTTCATGTTCAGCTGGGTGGAGCTGT
TGCTGGCGCGCACCCTCACCTCGGTCGACGCCAAGCCGATCACGGCGGTGATGACGCGCACGGTGTCGGCCTCGGGCATG
GACTGGGGCGTGCTGGCCGCGGCCGGCGTGCTGACCATCATCCCCGGCGCGCTGGTGATCTGGTTTGTGCGGAACTACAT
CGCGAAGGGCTTCGCGATGGGCCGCGTCTAG

Upstream 100 bases:

>100_bases
TTCTCGATCGTGTACTTCCTCATCATCCTGCTGTTCTGCTTCGTCCTCTATAACTGGATGCAGCGCGTGGGCAGCGCCAG
CACGGCCGCGGGAGACGACC

Downstream 100 bases:

>100_bases
AACGAGAACGGGAGACACAGCCATGTTCAGCTGGATGGCCTGGACGCCCGAGGTGGCGATCTTCTTCGGCTGCATCGCGT
TGATGCTGGCCGGCATGACG

Product: transmembrane ABC transporter protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 276; Mature: 276

Protein sequence:

>276_residues
MRKNNNNEHKRKIARAITLVVYVAFAVLPLYWMLSMSLKTNEETLAGFSLWPRLMTFDNYKVIFTDPSWYWGYINSILYV
TMNTVLSTVVALPAAYAFSRYRFLGDKHMFFWLLTNRMTPPAVFLLPFFQLYSTVGLMDTHLGVALAHMLFNVPLAVWIL
EGFMSGIPREIDETAYIDGYSFPAFFLKIFLPLIKAGVGVTAFFCFMFSWVELLLARTLTSVDAKPITAVMTRTVSASGM
DWGVLAAAGVLTIIPGALVIWFVRNYIAKGFAMGRV

Sequences:

>Translated_276_residues
MRKNNNNEHKRKIARAITLVVYVAFAVLPLYWMLSMSLKTNEETLAGFSLWPRLMTFDNYKVIFTDPSWYWGYINSILYV
TMNTVLSTVVALPAAYAFSRYRFLGDKHMFFWLLTNRMTPPAVFLLPFFQLYSTVGLMDTHLGVALAHMLFNVPLAVWIL
EGFMSGIPREIDETAYIDGYSFPAFFLKIFLPLIKAGVGVTAFFCFMFSWVELLLARTLTSVDAKPITAVMTRTVSASGM
DWGVLAAAGVLTIIPGALVIWFVRNYIAKGFAMGRV
>Mature_276_residues
MRKNNNNEHKRKIARAITLVVYVAFAVLPLYWMLSMSLKTNEETLAGFSLWPRLMTFDNYKVIFTDPSWYWGYINSILYV
TMNTVLSTVVALPAAYAFSRYRFLGDKHMFFWLLTNRMTPPAVFLLPFFQLYSTVGLMDTHLGVALAHMLFNVPLAVWIL
EGFMSGIPREIDETAYIDGYSFPAFFLKIFLPLIKAGVGVTAFFCFMFSWVELLLARTLTSVDAKPITAVMTRTVSASGM
DWGVLAAAGVLTIIPGALVIWFVRNYIAKGFAMGRV

Specific function: May participate in oleandomycin secretion during antibiotic production [H]

COG id: COG0395

COG function: function code G; ABC-type sugar transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787571, Length=275, Percent_Identity=25.4545454545455, Blast_Score=83, Evalue=2e-17,
Organism=Escherichia coli, GI1790464, Length=278, Percent_Identity=24.4604316546763, Blast_Score=73, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 31248; Mature: 31248

Theoretical pI: Translated: 9.82; Mature: 9.82

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
5.1 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
5.1 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKNNNNEHKRKIARAITLVVYVAFAVLPLYWMLSMSLKTNEETLAGFSLWPRLMTFDNY
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCC
KVIFTDPSWYWGYINSILYVTMNTVLSTVVALPAAYAFSRYRFLGDKHMFFWLLTNRMTP
EEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEEEECCCCCC
PAVFLLPFFQLYSTVGLMDTHLGVALAHMLFNVPLAVWILEGFMSGIPREIDETAYIDGY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCEEECCC
SFPAFFLKIFLPLIKAGVGVTAFFCFMFSWVELLLARTLTSVDAKPITAVMTRTVSASGM
CHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCC
DWGVLAAAGVLTIIPGALVIWFVRNYIAKGFAMGRV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MRKNNNNEHKRKIARAITLVVYVAFAVLPLYWMLSMSLKTNEETLAGFSLWPRLMTFDNY
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCC
KVIFTDPSWYWGYINSILYVTMNTVLSTVVALPAAYAFSRYRFLGDKHMFFWLLTNRMTP
EEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEEEECCCCCC
PAVFLLPFFQLYSTVGLMDTHLGVALAHMLFNVPLAVWILEGFMSGIPREIDETAYIDGY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCEEECCC
SFPAFFLKIFLPLIKAGVGVTAFFCFMFSWVELLLARTLTSVDAKPITAVMTRTVSASGM
CHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCC
DWGVLAAAGVLTIIPGALVIWFVRNYIAKGFAMGRV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8244027 [H]