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The map label for this gene is ycjO [C]

Identifier: 17547767

GI number: 17547767

Start: 3285439

End: 3286329

Strand: Direct

Name: ycjO [C]

Synonym: RSc3048

Alternate gene names: 17547767

Gene position: 3285439-3286329 (Clockwise)

Preceding gene: 17547766

Following gene: 17547768

Centisome position: 88.4

GC content: 64.98

Gene sequence:

>891_bases
ATGAACAAGCCGCTCAACAACAAGGCGTGGTTCCTGATCCTGCCGGTGTTCCTGTGCGTGGCGTTCTCCGCCATCCTGCC
GCTGATGACGGTGGTCAACTATTCGGTGCAGGACATCATCAGCCCCGAGCAGCACGTGTTCGTCGGCGTGGACTGGTTCC
GCCAGATTCTGCGCGACGGTGACCTGCAGGACGCGCTGACACGCCAGCTGATCTTCTCGCTGTGCGTGCTGGGGGTGGAG
ATTCCGCTGGGCATCGGTCTGGCGCTGGCGATGCCGAGCAAGGGCTGGAAGGCATCCGCCGCGCTGGTGATCCTGGCCAT
GCCGCTGCTGATTCCCTGGAACGTGGTCGGCACGATCTGGCAGATCTTCGGGCGCTCGGACATCGGCCTGGCCGGCTACT
GGCTCAACCGGCTGGGCGTGGACTACAGCTACACCTCGCACCCGTTCGACGCGTGGATCACGGTGCTGATCATGGACGTC
TGGCACTGGACGCCGCTGGTGGCGCTGCTGGCCTATGCCGGCCTGCGCTCGATCCCGGATGCGTTCTACCAGGCGGCCGA
GATCGACGGCGCCAGCCGGCTGGCGGTGTTCCGCTACATCCAGCTGCCGAAGATGCGCGGCGTGCTGATGATCGGCGTGC
TGCTGCGCTTCATGGACAGCTTCATGATCTACACCGAGCCGTTCGTGCTGACCGGCGGCGGCCCCGGCAACGCCACCACG
TTCCTGTCGCAATACCTGACGCAGAAGGCGGTGGGCCAGTTCGACCTGGGCCCGGCGGCGGCCTTCTCGATCGTGTACTT
CCTCATCATCCTGCTGTTCTGCTTCGTCCTCTATAACTGGATGCAGCGCGTGGGCAGCGCCAGCACGGCCGCGGGAGACG
ACCATGCGTAA

Upstream 100 bases:

>100_bases
CCAAGCTGCCCAACGACGTGGCGGTGGACGCGTCGCGCGTCTGGCTGCGCGTGGATGCGCCGCAGACGCTGTACTACTGC
AACGACGAGAGGATCGGCCG

Downstream 100 bases:

>100_bases
GAACAACAACAACGAGCACAAGCGCAAGATCGCCCGCGCCATCACGCTGGTGGTGTACGTGGCATTCGCGGTGCTGCCGC
TGTACTGGATGCTGAGCATG

Product: sugar-phosphate transmembrane ABC transporter protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 296; Mature: 296

Protein sequence:

>296_residues
MNKPLNNKAWFLILPVFLCVAFSAILPLMTVVNYSVQDIISPEQHVFVGVDWFRQILRDGDLQDALTRQLIFSLCVLGVE
IPLGIGLALAMPSKGWKASAALVILAMPLLIPWNVVGTIWQIFGRSDIGLAGYWLNRLGVDYSYTSHPFDAWITVLIMDV
WHWTPLVALLAYAGLRSIPDAFYQAAEIDGASRLAVFRYIQLPKMRGVLMIGVLLRFMDSFMIYTEPFVLTGGGPGNATT
FLSQYLTQKAVGQFDLGPAAAFSIVYFLIILLFCFVLYNWMQRVGSASTAAGDDHA

Sequences:

>Translated_296_residues
MNKPLNNKAWFLILPVFLCVAFSAILPLMTVVNYSVQDIISPEQHVFVGVDWFRQILRDGDLQDALTRQLIFSLCVLGVE
IPLGIGLALAMPSKGWKASAALVILAMPLLIPWNVVGTIWQIFGRSDIGLAGYWLNRLGVDYSYTSHPFDAWITVLIMDV
WHWTPLVALLAYAGLRSIPDAFYQAAEIDGASRLAVFRYIQLPKMRGVLMIGVLLRFMDSFMIYTEPFVLTGGGPGNATT
FLSQYLTQKAVGQFDLGPAAAFSIVYFLIILLFCFVLYNWMQRVGSASTAAGDDHA
>Mature_296_residues
MNKPLNNKAWFLILPVFLCVAFSAILPLMTVVNYSVQDIISPEQHVFVGVDWFRQILRDGDLQDALTRQLIFSLCVLGVE
IPLGIGLALAMPSKGWKASAALVILAMPLLIPWNVVGTIWQIFGRSDIGLAGYWLNRLGVDYSYTSHPFDAWITVLIMDV
WHWTPLVALLAYAGLRSIPDAFYQAAEIDGASRLAVFRYIQLPKMRGVLMIGVLLRFMDSFMIYTEPFVLTGGGPGNATT
FLSQYLTQKAVGQFDLGPAAAFSIVYFLIILLFCFVLYNWMQRVGSASTAAGDDHA

Specific function: Probably part of the binding-protein-dependent transport system y4oPQRS. This system probably transports a sugar-like molecule. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1175

COG function: function code G; ABC-type sugar transport systems, permease components

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787570, Length=236, Percent_Identity=27.5423728813559, Blast_Score=72, Evalue=5e-14,
Organism=Escherichia coli, GI1789861, Length=292, Percent_Identity=25.3424657534247, Blast_Score=71, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 32866; Mature: 32866

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKPLNNKAWFLILPVFLCVAFSAILPLMTVVNYSVQDIISPEQHVFVGVDWFRQILRDG
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHEEECHHHHHHHHHCC
DLQDALTRQLIFSLCVLGVEIPLGIGLALAMPSKGWKASAALVILAMPLLIPWNVVGTIW
CHHHHHHHHHHHHHHHHHHHHHHCCCHHEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
QIFGRSDIGLAGYWLNRLGVDYSYTSHPFDAWITVLIMDVWHWTPLVALLAYAGLRSIPD
HHHCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AFYQAAEIDGASRLAVFRYIQLPKMRGVLMIGVLLRFMDSFMIYTEPFVLTGGGPGNATT
HHHHHHHCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHH
FLSQYLTQKAVGQFDLGPAAAFSIVYFLIILLFCFVLYNWMQRVGSASTAAGDDHA
HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MNKPLNNKAWFLILPVFLCVAFSAILPLMTVVNYSVQDIISPEQHVFVGVDWFRQILRDG
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHEEECHHHHHHHHHCC
DLQDALTRQLIFSLCVLGVEIPLGIGLALAMPSKGWKASAALVILAMPLLIPWNVVGTIW
CHHHHHHHHHHHHHHHHHHHHHHCCCHHEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
QIFGRSDIGLAGYWLNRLGVDYSYTSHPFDAWITVLIMDVWHWTPLVALLAYAGLRSIPD
HHHCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AFYQAAEIDGASRLAVFRYIQLPKMRGVLMIGVLLRFMDSFMIYTEPFVLTGGGPGNATT
HHHHHHHCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHH
FLSQYLTQKAVGQFDLGPAAAFSIVYFLIILLFCFVLYNWMQRVGSASTAAGDDHA
HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]