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The map label for this gene is ccsB [H]

Identifier: 17547705

GI number: 17547705

Start: 3218114

End: 3220216

Strand: Reverse

Name: ccsB [H]

Synonym: RSc2986

Alternate gene names: 17547705

Gene position: 3220216-3218114 (Counterclockwise)

Preceding gene: 17547706

Following gene: 17547704

Centisome position: 86.65

GC content: 68.0

Gene sequence:

>2103_bases
ATGCGCTTTGCGATCAGCCTGCTGACGGTGATCGCCATTGCCAGCGTGATCGGCACCGTGCTCAAGCAGAACGAGCCGTA
CCCGAACTACGTCAACCAGTTCGGGCCGTTCTGGGCGGACGTGTTCCGCGCGCTGACGCTGCCGACGGTGTACAGCGCGT
GGTGGTTCCTGCTGATCCTGGCGTTCCTGGTCGTGTCGACCTCGTTGTGCATCCTGCGCAATGCGCCCAAGATGCTGGCC
GATATGCGCGCCTGGCGCGAGCATGTGCGCGAGGGCAGCCTGCGCGCGTTCCACCACAGGGATGAATTCGATGCGCCGGC
GGATGCCGCCGCGGTCACGGCGCGCCTGGCCGCGCTTGCACAGAACCGCGGCTTCCGCATCCGTGCCTTCGCGCGCGACG
GCGGGGCCACGCTCATCGCCGCCAAGGCAGGTGCCGGCAACAAGATCGGCTACATCCTGGCGCACACGGCCATCGTGATC
ATCTGCATCGGCGGGCTGCTGGATGGCGACATGATGATCCGCCTGCAGATGTGGTTCGGCGGCAAGTCGCCGATCCGGGG
CAACGCGGTCATCAGCGAGATCGGTCCGGAGCACCGGCTGCCGGCGTCCAACCCGGGCTTTCGGGGCAATGCCTTCGTGC
CGGAGGGCGCGACTGTCGGCACGGCGATCCTGAACATCGGGGATGGGGCCCTGATCCAGGATCTGCCGTTCTCCGTCATG
CTCAGGAAGTTCACCGTCGAGCATTACTCGACCGGCATGCCCAAGCTGTTCGCCAGCGACATCGTCGTGACCGACCGCAG
CACCGGCAAGCAGACCGCCGCGCGGGTCGAGGTCAACAAGCCCTTCGTCTACGACGGCGTGGCGATCTACCAGTCGAGCT
TCGAGGATGGCGGCTCCAGGCTCAAGCTGACGGGCTTTCCGATGCGCGGGGCGGATGCGAAGCCGTTCGCGCTGTCCGGC
ACGGTCGGCGAGAACACCCGGCTGACCGGCGCCGGTGCCGACTATACCGTCGAGTTCACCGACTTCCGCCTGATGAACAT
CGAGACCGTCACCGATGCCTCGGGCAAGCGGGATGCGCGCGGCGTCGGCACGGGTGGTGGCGATACCGGCCTGCGCGCCG
AGCTCGGCAACGCCAAGCGGATGACGCGCGAGCGCGATCTGCGCAACGTCGGGCCTTCGGTGCAGTACAAGCTGCGCGAC
GCCAACGGCCAGGCGCGCGAGTTCAGCAATTACATGCTGCCGGTCACGCTCGAAGGGCAGTCGGTCTTCCTCGCCGGTGT
GCGCACGCAGCCGGACGAGCCGTTCCGCTACCTGCGCATCCCCGCCGATGCGCAGGGCTCGGTCAACGACTGGATGCGCC
TGCGGGCCGCGCTGCAGAGCTCGGCCATGCGTGGGGAGGCGGCGCGCCGCTTCGCGATGCTGTCGATGCCCGGCGATGAT
CGCGCGGTGTTGCGCGCGCAGCTGGCCGAAAGTGCTCGCCGCGCGCTCGACCTGTTCGCCGGCGCAACCGACATCAAGGG
CGCGCCGGCGGAGGGGCCGGGCGGCTTTGCCGCGGTCGCCGGCTTCCTGCAGAAATCGGTGCCCGAGGGCGAGCGCGAAA
AGGCCGCCGATGTGCTGATGAAGATCATCAACAGCGCGATGTGGGAGCTGTGGCAACTGGCCCGGGCGCAGGACGGCCTC
GCCGCCCCCGCCGTCGACGCCGCCGGCAGTCAGTGGCTGCAGACGGCCATCAACTCGCTGTCGGACAGCTTTTTCTACGG
TGCGCCGGTGTACCTGCAGTTGGTTGATTTCCAGCAAGTGCAGGCCAGCGTGTTCCAGCTCACCCGTGCGCCGGGCAAGA
ACATCGTGTATCTTGGGTCGTTGCTGCTGGTGCTGGGTGTGTTCTCGATGTTCTACGTACGGGAGCGCCGCTGGTGGCTG
TGGATCCGCCCGCAAGCCGACGGATCCGCGCAGGGGGCACACGTGCTGACAGCCATGTCGACCACACGCCGCACGCTCGA
CTTCGACCGCGAGTTCGAGCGCCTCAAGCAGGATGTCCGCGCCGCAGCCGGCGCGCCCGGCGCCGCCACCGCAGCGGCCG
CCGAACAACCGCCAACGAAGTGA

Upstream 100 bases:

>100_bases
GTTTCTGAACAGGCATTGCATGTCTTCGGTTTCCACTTCCGGCGTCCGGATCCGCTCACGGCGCCGTGCCCTGCGCGAGG
CGGTCGAGTTGCTGTCGTCG

Downstream 100 bases:

>100_bases
GCAGGTGATGGAAGCGACCAACCTCCCCCAACCGTCCGCCCCGGCCGATCTGGGTGCACTGCAGCGGCCGTCCTACTTCC
GTCGTCTCGGCCCGTTCGAC

Product: cytochrome C-type biogenesis transmembrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 700; Mature: 700

Protein sequence:

>700_residues
MRFAISLLTVIAIASVIGTVLKQNEPYPNYVNQFGPFWADVFRALTLPTVYSAWWFLLILAFLVVSTSLCILRNAPKMLA
DMRAWREHVREGSLRAFHHRDEFDAPADAAAVTARLAALAQNRGFRIRAFARDGGATLIAAKAGAGNKIGYILAHTAIVI
ICIGGLLDGDMMIRLQMWFGGKSPIRGNAVISEIGPEHRLPASNPGFRGNAFVPEGATVGTAILNIGDGALIQDLPFSVM
LRKFTVEHYSTGMPKLFASDIVVTDRSTGKQTAARVEVNKPFVYDGVAIYQSSFEDGGSRLKLTGFPMRGADAKPFALSG
TVGENTRLTGAGADYTVEFTDFRLMNIETVTDASGKRDARGVGTGGGDTGLRAELGNAKRMTRERDLRNVGPSVQYKLRD
ANGQAREFSNYMLPVTLEGQSVFLAGVRTQPDEPFRYLRIPADAQGSVNDWMRLRAALQSSAMRGEAARRFAMLSMPGDD
RAVLRAQLAESARRALDLFAGATDIKGAPAEGPGGFAAVAGFLQKSVPEGEREKAADVLMKIINSAMWELWQLARAQDGL
AAPAVDAAGSQWLQTAINSLSDSFFYGAPVYLQLVDFQQVQASVFQLTRAPGKNIVYLGSLLLVLGVFSMFYVRERRWWL
WIRPQADGSAQGAHVLTAMSTTRRTLDFDREFERLKQDVRAAAGAPGAATAAAAEQPPTK

Sequences:

>Translated_700_residues
MRFAISLLTVIAIASVIGTVLKQNEPYPNYVNQFGPFWADVFRALTLPTVYSAWWFLLILAFLVVSTSLCILRNAPKMLA
DMRAWREHVREGSLRAFHHRDEFDAPADAAAVTARLAALAQNRGFRIRAFARDGGATLIAAKAGAGNKIGYILAHTAIVI
ICIGGLLDGDMMIRLQMWFGGKSPIRGNAVISEIGPEHRLPASNPGFRGNAFVPEGATVGTAILNIGDGALIQDLPFSVM
LRKFTVEHYSTGMPKLFASDIVVTDRSTGKQTAARVEVNKPFVYDGVAIYQSSFEDGGSRLKLTGFPMRGADAKPFALSG
TVGENTRLTGAGADYTVEFTDFRLMNIETVTDASGKRDARGVGTGGGDTGLRAELGNAKRMTRERDLRNVGPSVQYKLRD
ANGQAREFSNYMLPVTLEGQSVFLAGVRTQPDEPFRYLRIPADAQGSVNDWMRLRAALQSSAMRGEAARRFAMLSMPGDD
RAVLRAQLAESARRALDLFAGATDIKGAPAEGPGGFAAVAGFLQKSVPEGEREKAADVLMKIINSAMWELWQLARAQDGL
AAPAVDAAGSQWLQTAINSLSDSFFYGAPVYLQLVDFQQVQASVFQLTRAPGKNIVYLGSLLLVLGVFSMFYVRERRWWL
WIRPQADGSAQGAHVLTAMSTTRRTLDFDREFERLKQDVRAAAGAPGAATAAAAEQPPTK
>Mature_700_residues
MRFAISLLTVIAIASVIGTVLKQNEPYPNYVNQFGPFWADVFRALTLPTVYSAWWFLLILAFLVVSTSLCILRNAPKMLA
DMRAWREHVREGSLRAFHHRDEFDAPADAAAVTARLAALAQNRGFRIRAFARDGGATLIAAKAGAGNKIGYILAHTAIVI
ICIGGLLDGDMMIRLQMWFGGKSPIRGNAVISEIGPEHRLPASNPGFRGNAFVPEGATVGTAILNIGDGALIQDLPFSVM
LRKFTVEHYSTGMPKLFASDIVVTDRSTGKQTAARVEVNKPFVYDGVAIYQSSFEDGGSRLKLTGFPMRGADAKPFALSG
TVGENTRLTGAGADYTVEFTDFRLMNIETVTDASGKRDARGVGTGGGDTGLRAELGNAKRMTRERDLRNVGPSVQYKLRD
ANGQAREFSNYMLPVTLEGQSVFLAGVRTQPDEPFRYLRIPADAQGSVNDWMRLRAALQSSAMRGEAARRFAMLSMPGDD
RAVLRAQLAESARRALDLFAGATDIKGAPAEGPGGFAAVAGFLQKSVPEGEREKAADVLMKIINSAMWELWQLARAQDGL
AAPAVDAAGSQWLQTAINSLSDSFFYGAPVYLQLVDFQQVQASVFQLTRAPGKNIVYLGSLLLVLGVFSMFYVRERRWWL
WIRPQADGSAQGAHVLTAMSTTRRTLDFDREFERLKQDVRAAAGAPGAATAAAAEQPPTK

Specific function: Required during biogenesis of c-type cytochromes (cytochrome c6 and cytochrome f) at the step of heme attachment [H]

COG id: COG1333

COG function: function code O; ResB protein required for cytochrome c biosynthesis

Gene ontology:

Cell location: Cellular thylakoid membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ccs1/ccsB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007816 [H]

Pfam domain/function: PF05140 ResB [H]

EC number: NA

Molecular weight: Translated: 75971; Mature: 75971

Theoretical pI: Translated: 9.89; Mature: 9.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRFAISLLTVIAIASVIGTVLKQNEPYPNYVNQFGPFWADVFRALTLPTVYSAWWFLLIL
CCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
AFLVVSTSLCILRNAPKMLADMRAWREHVREGSLRAFHHRDEFDAPADAAAVTARLAALA
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCHHHHHHHHHHHHH
QNRGFRIRAFARDGGATLIAAKAGAGNKIGYILAHTAIVIICIGGLLDGDMMIRLQMWFG
HCCCCEEEEEECCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEC
GKSPIRGNAVISEIGPEHRLPASNPGFRGNAFVPEGATVGTAILNIGDGALIQDLPFSVM
CCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHEEEECCCCCHHHHCCHHHH
LRKFTVEHYSTGMPKLFASDIVVTDRSTGKQTAARVEVNKPFVYDGVAIYQSSFEDGGSR
HHHHHHHHHCCCCCHHHHCCEEEECCCCCCCCCEEEECCCCEEECCHHHHHHHHCCCCCE
LKLTGFPMRGADAKPFALSGTVGENTRLTGAGADYTVEFTDFRLMNIETVTDASGKRDAR
EEEEECCCCCCCCCCEEEECCCCCCCEEEECCCCEEEEEEEEEEEEEEEECCCCCCCCCC
GVGTGGGDTGLRAELGNAKRMTRERDLRNVGPSVQYKLRDANGQAREFSNYMLPVTLEGQ
CCCCCCCCCCCHHHCCCHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHCCCEEEEEECCC
SVFLAGVRTQPDEPFRYLRIPADAQGSVNDWMRLRAALQSSAMRGEAARRFAMLSMPGDD
EEEEEECCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHEEEEECCCCC
RAVLRAQLAESARRALDLFAGATDIKGAPAEGPGGFAAVAGFLQKSVPEGEREKAADVLM
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHH
KIINSAMWELWQLARAQDGLAAPAVDAAGSQWLQTAINSLSDSFFYGAPVYLQLVDFQQV
HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEHHHHHH
QASVFQLTRAPGKNIVYLGSLLLVLGVFSMFYVRERRWWLWIRPQADGSAQGAHVLTAMS
HHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCEEEEHHH
TTRRTLDFDREFERLKQDVRAAAGAPGAATAAAAEQPPTK
HHHHHHCHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCC
>Mature Secondary Structure
MRFAISLLTVIAIASVIGTVLKQNEPYPNYVNQFGPFWADVFRALTLPTVYSAWWFLLIL
CCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
AFLVVSTSLCILRNAPKMLADMRAWREHVREGSLRAFHHRDEFDAPADAAAVTARLAALA
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCHHHHHHHHHHHHH
QNRGFRIRAFARDGGATLIAAKAGAGNKIGYILAHTAIVIICIGGLLDGDMMIRLQMWFG
HCCCCEEEEEECCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEC
GKSPIRGNAVISEIGPEHRLPASNPGFRGNAFVPEGATVGTAILNIGDGALIQDLPFSVM
CCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHEEEECCCCCHHHHCCHHHH
LRKFTVEHYSTGMPKLFASDIVVTDRSTGKQTAARVEVNKPFVYDGVAIYQSSFEDGGSR
HHHHHHHHHCCCCCHHHHCCEEEECCCCCCCCCEEEECCCCEEECCHHHHHHHHCCCCCE
LKLTGFPMRGADAKPFALSGTVGENTRLTGAGADYTVEFTDFRLMNIETVTDASGKRDAR
EEEEECCCCCCCCCCEEEECCCCCCCEEEECCCCEEEEEEEEEEEEEEEECCCCCCCCCC
GVGTGGGDTGLRAELGNAKRMTRERDLRNVGPSVQYKLRDANGQAREFSNYMLPVTLEGQ
CCCCCCCCCCCHHHCCCHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHCCCEEEEEECCC
SVFLAGVRTQPDEPFRYLRIPADAQGSVNDWMRLRAALQSSAMRGEAARRFAMLSMPGDD
EEEEEECCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHEEEEECCCCC
RAVLRAQLAESARRALDLFAGATDIKGAPAEGPGGFAAVAGFLQKSVPEGEREKAADVLM
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHH
KIINSAMWELWQLARAQDGLAAPAVDAAGSQWLQTAINSLSDSFFYGAPVYLQLVDFQQV
HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEHHHHHH
QASVFQLTRAPGKNIVYLGSLLLVLGVFSMFYVRERRWWLWIRPQADGSAQGAHVLTAMS
HHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCEEEEHHH
TTRRTLDFDREFERLKQDVRAAAGAPGAATAAAAEQPPTK
HHHHHHCHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA