| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
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The map label for this gene is hisB [H]
Identifier: 17547669
GI number: 17547669
Start: 3178738
End: 3179328
Strand: Reverse
Name: hisB [H]
Synonym: RSc2950
Alternate gene names: 17547669
Gene position: 3179328-3178738 (Counterclockwise)
Preceding gene: 17547670
Following gene: 17547668
Centisome position: 85.55
GC content: 65.99
Gene sequence:
>591_bases ATGAGCCGCCGCGCCGAGGTCACTCGCAACACCTCCGAAACGCAGATCCGCGTCGCCCTTGATCTGGACGGCACGGGCAA GCAGACGCTGAATACCGGCGTTCCCTTCCTCGACCACATGCTCGACCAGATCGCCCGTCATGGCATGGTCGACCTGGACG TCACGGCCACCGGCGACACCCACATCGACGATCACCACACCGTGGAAGACGTCGGCATCACGCTCGGCCAGGCGGTCGCC AAGGCTATCGGCGACAAGAAGGGCATCGTGCGCTACGGCCATAGCTACGTGCCGCTGGACGAAGCCCTGTCGCGCGTGGT GATCGACTTCTCCGGCCGTCCGGGCCTGGAGTTCCACGTGCCGTTCACGCGGGCGCGCGTGGGCAGCTTCGACGTGGACC TGTCCATCGAATTCTTCCGCGGGTTCGTCAACCATGCCGGCGTGACGCTGCATATCGACAACCTGCGCGGCGTCAACGCG CATCACCAGATCGAAACCGTGTTCAAGGCCTTCGGCCGCGCGCTGCGCATGGCGGTGGAGATCGATCCGCGTGCCGCCGG CACGATCCCGTCGACCAAGGGCGCGCTCTGA
Upstream 100 bases:
>100_bases TGCACCCGTTGCTGGCCAACTGTCTGCGCGTGACGGTCAGCAACCCCGAAGAAAACGCGCAATTTCTTGATGCCTTTGCC GCATCGCTGCAGGACACCCC
Downstream 100 bases:
>100_bases TTCCACGCATCGGCACGGCCGCGCCCGCCCGATACCTGACCGGCCACCCGATCCCATGGATCTGACCAAGAGCTTCTTTT CGCTGCTGGCACTGATCAAC
Product: imidazoleglycerol-phosphate dehydratase
Products: NA
Alternate protein names: IGPD [H]
Number of amino acids: Translated: 196; Mature: 195
Protein sequence:
>196_residues MSRRAEVTRNTSETQIRVALDLDGTGKQTLNTGVPFLDHMLDQIARHGMVDLDVTATGDTHIDDHHTVEDVGITLGQAVA KAIGDKKGIVRYGHSYVPLDEALSRVVIDFSGRPGLEFHVPFTRARVGSFDVDLSIEFFRGFVNHAGVTLHIDNLRGVNA HHQIETVFKAFGRALRMAVEIDPRAAGTIPSTKGAL
Sequences:
>Translated_196_residues MSRRAEVTRNTSETQIRVALDLDGTGKQTLNTGVPFLDHMLDQIARHGMVDLDVTATGDTHIDDHHTVEDVGITLGQAVA KAIGDKKGIVRYGHSYVPLDEALSRVVIDFSGRPGLEFHVPFTRARVGSFDVDLSIEFFRGFVNHAGVTLHIDNLRGVNA HHQIETVFKAFGRALRMAVEIDPRAAGTIPSTKGAL >Mature_195_residues SRRAEVTRNTSETQIRVALDLDGTGKQTLNTGVPFLDHMLDQIARHGMVDLDVTATGDTHIDDHHTVEDVGITLGQAVAK AIGDKKGIVRYGHSYVPLDEALSRVVIDFSGRPGLEFHVPFTRARVGSFDVDLSIEFFRGFVNHAGVTLHIDNLRGVNAH HQIETVFKAFGRALRMAVEIDPRAAGTIPSTKGAL
Specific function: Histidine biosynthesis; sixth step. Histidine biosynthesis; eighth step. [C]
COG id: COG0131
COG function: function code E; Imidazoleglycerol-phosphate dehydratase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the imidazoleglycerol-phosphate dehydratase family [H]
Homologues:
Organism=Escherichia coli, GI87082027, Length=194, Percent_Identity=50, Blast_Score=192, Evalue=1e-50, Organism=Saccharomyces cerevisiae, GI6324776, Length=218, Percent_Identity=40.3669724770642, Blast_Score=161, Evalue=5e-41,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000807 - InterPro: IPR020565 - InterPro: IPR020568 [H]
Pfam domain/function: PF00475 IGPD [H]
EC number: =4.2.1.19 [H]
Molecular weight: Translated: 21390; Mature: 21258
Theoretical pI: Translated: 6.75; Mature: 6.75
Prosite motif: PS00954 IGP_DEHYDRATASE_1 ; PS00955 IGP_DEHYDRATASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRRAEVTRNTSETQIRVALDLDGTGKQTLNTGVPFLDHMLDQIARHGMVDLDVTATGDT CCCCCCCCCCCCCEEEEEEEEECCCCCHHHHCCCHHHHHHHHHHHHCCCEEEEEEECCCC HIDDHHTVEDVGITLGQAVAKAIGDKKGIVRYGHSYVPLDEALSRVVIDFSGRPGLEFHV CCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHEEEEEECCCCCCEEEC PFTRARVGSFDVDLSIEFFRGFVNHAGVTLHIDNLRGVNAHHQIETVFKAFGRALRMAVE CHHHHCCCCCEEEEEHHHHHHHHHHCCEEEEECCCCCCCHHHHHHHHHHHHHHHHEEEEE IDPRAAGTIPSTKGAL ECCCCCCCCCCCCCCC >Mature Secondary Structure SRRAEVTRNTSETQIRVALDLDGTGKQTLNTGVPFLDHMLDQIARHGMVDLDVTATGDT CCCCCCCCCCCCEEEEEEEEECCCCCHHHHCCCHHHHHHHHHHHHCCCEEEEEEECCCC HIDDHHTVEDVGITLGQAVAKAIGDKKGIVRYGHSYVPLDEALSRVVIDFSGRPGLEFHV CCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHEEEEEECCCCCCEEEC PFTRARVGSFDVDLSIEFFRGFVNHAGVTLHIDNLRGVNAHHQIETVFKAFGRALRMAVE CHHHHCCCCCEEEEEHHHHHHHHHHCCEEEEECCCCCCCHHHHHHHHHHHHHHHHEEEEE IDPRAAGTIPSTKGAL ECCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA