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The map label for this gene is ybgI [C]

Identifier: 17547650

GI number: 17547650

Start: 3161186

End: 3161932

Strand: Reverse

Name: ybgI [C]

Synonym: RSc2931

Alternate gene names: 17547650

Gene position: 3161932-3161186 (Counterclockwise)

Preceding gene: 17547652

Following gene: 17547648

Centisome position: 85.08

GC content: 65.6

Gene sequence:

>747_bases
ATGGATCGAAAAGAACTTGAATTGTACTTGAACGACCTGTTGCAGGCGGCCCGCTTTCGGGACTATTGCCCCAATGGCCT
GCAGGTACAAGGGCGCGACCCGATCGCGCACATCGTGACCGGCGTGACGGCCAGCCTGGCCCTGATCGAGGCTGCGATCG
ATGTCCGCGCCGACGCCATCCTGGTGCATCACGGCTACTTCTGGAAGGGAGAGGATGCCCGCGTGATCGGGCAGAAGCAT
GCGCGCCTGAAGCAACTGCTGGCGCATGACGTCAACCTGTTTGCCTACCATTTGCCGCTGGATGCGCATCCGACGCTTGG
CAACAACGCCCAGTTGGGTGCGCTGCTCGGCATCCAGCCGACCGGGCGCTTCGGCGATGACGAGCTCGGCTGGATCGGCA
CGTTGCCCGAGGCCACCACCTTGGGCGCCTTTGCGGAGGTGGTGGCGGCACGGCTGGATCGCATGCCGCTGGTGATCGGC
GGAGCGGATCGGCCGGTGCACACCATCGGCTGGTGCACCGGTGGTGCGCAGGGCTGGTTCGATGCGGCGGTGTCGGCCGG
GGTGGACGTCTACCTCAGCGGCGAAGCGTCCGAGCAGACCACACATCTGGCCCGCGAGTCGGGTGTCGCCTATATTGGCG
CGGGCCATCATGCCACCGAGCGCGGCGGCGTGCGCGCGCTCGGTAACCACCTTGCCGAGCACTTCGGGGTGCGCCACACC
TTCATCGATATTCCGAATCCGGTGTGA

Upstream 100 bases:

>100_bases
TTTGAGGGTGGCGATCACAAACCATACCGCGAGAACGACAGTCACAGCCTGTGCGAAAAACAGCCAGAAGCGGCGCAACA
TAGGGTGAATTTCAGTCGAA

Downstream 100 bases:

>100_bases
TTCAAGGTTACCTTTATTGATTCTTGGATTTCAGGCTGTCGCGGATATCGCGCAGCAGCAGCGTGTTTTCCGGCGTGTCG
GCCGGCGGCGGGTTGGTGTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 248; Mature: 248

Protein sequence:

>248_residues
MDRKELELYLNDLLQAARFRDYCPNGLQVQGRDPIAHIVTGVTASLALIEAAIDVRADAILVHHGYFWKGEDARVIGQKH
ARLKQLLAHDVNLFAYHLPLDAHPTLGNNAQLGALLGIQPTGRFGDDELGWIGTLPEATTLGAFAEVVAARLDRMPLVIG
GADRPVHTIGWCTGGAQGWFDAAVSAGVDVYLSGEASEQTTHLARESGVAYIGAGHHATERGGVRALGNHLAEHFGVRHT
FIDIPNPV

Sequences:

>Translated_248_residues
MDRKELELYLNDLLQAARFRDYCPNGLQVQGRDPIAHIVTGVTASLALIEAAIDVRADAILVHHGYFWKGEDARVIGQKH
ARLKQLLAHDVNLFAYHLPLDAHPTLGNNAQLGALLGIQPTGRFGDDELGWIGTLPEATTLGAFAEVVAARLDRMPLVIG
GADRPVHTIGWCTGGAQGWFDAAVSAGVDVYLSGEASEQTTHLARESGVAYIGAGHHATERGGVRALGNHLAEHFGVRHT
FIDIPNPV
>Mature_248_residues
MDRKELELYLNDLLQAARFRDYCPNGLQVQGRDPIAHIVTGVTASLALIEAAIDVRADAILVHHGYFWKGEDARVIGQKH
ARLKQLLAHDVNLFAYHLPLDAHPTLGNNAQLGALLGIQPTGRFGDDELGWIGTLPEATTLGAFAEVVAARLDRMPLVIG
GADRPVHTIGWCTGGAQGWFDAAVSAGVDVYLSGEASEQTTHLARESGVAYIGAGHHATERGGVRALGNHLAEHFGVRHT
FIDIPNPV

Specific function: Unknown

COG id: COG0327

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0135 (NIF3) family

Homologues:

Organism=Escherichia coli, GI1786928, Length=248, Percent_Identity=52.0161290322581, Blast_Score=245, Evalue=2e-66,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y2931_RALSO (Q8XVA0)

Other databases:

- EMBL:   AL646052
- RefSeq:   NP_521052.1
- ProteinModelPortal:   Q8XVA0
- SMR:   Q8XVA0
- GeneID:   1221785
- GenomeReviews:   AL646052_GR
- KEGG:   rso:RSc2931
- NMPDR:   fig|267608.1.peg.2931
- HOGENOM:   HBG554751
- OMA:   PLDVHPE
- ProtClustDB:   CLSK897510
- BioCyc:   RSOL267608:RSC2931-MONOMER
- InterPro:   IPR002678
- PANTHER:   PTHR13799
- TIGRFAMs:   TIGR00486

Pfam domain/function: PF01784 NIF3; SSF102705 interacting_NIF3

EC number: NA

Molecular weight: Translated: 26651; Mature: 26651

Theoretical pI: Translated: 6.26; Mature: 6.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDRKELELYLNDLLQAARFRDYCPNGLQVQGRDPIAHIVTGVTASLALIEAAIDVRADAI
CCHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCEE
LVHHGYFWKGEDARVIGQKHARLKQLLAHDVNLFAYHLPLDAHPTLGNNAQLGALLGIQP
EEECCEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCEEEEEECCC
TGRFGDDELGWIGTLPEATTLGAFAEVVAARLDRMPLVIGGADRPVHTIGWCTGGAQGWF
CCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCEEEEEEECCCCCHHH
DAAVSAGVDVYLSGEASEQTTHLARESGVAYIGAGHHATERGGVRALGNHLAEHFGVRHT
HHHHHCCEEEEECCCCCHHHHHHHHHCCEEEEECCCCCCCCCCHHHHHHHHHHHHCCEEE
FIDIPNPV
EEECCCCC
>Mature Secondary Structure
MDRKELELYLNDLLQAARFRDYCPNGLQVQGRDPIAHIVTGVTASLALIEAAIDVRADAI
CCHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCEE
LVHHGYFWKGEDARVIGQKHARLKQLLAHDVNLFAYHLPLDAHPTLGNNAQLGALLGIQP
EEECCEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCEEEEEECCC
TGRFGDDELGWIGTLPEATTLGAFAEVVAARLDRMPLVIGGADRPVHTIGWCTGGAQGWF
CCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCEEEEEEECCCCCHHH
DAAVSAGVDVYLSGEASEQTTHLARESGVAYIGAGHHATERGGVRALGNHLAEHFGVRHT
HHHHHCCEEEEECCCCCHHHHHHHHHCCEEEEECCCCCCCCCCHHHHHHHHHHHHCCEEE
FIDIPNPV
EEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11823852