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The map label for this gene is petA [H]

Identifier: 17547648

GI number: 17547648

Start: 3159893

End: 3160501

Strand: Reverse

Name: petA [H]

Synonym: RSc2929

Alternate gene names: 17547648

Gene position: 3160501-3159893 (Counterclockwise)

Preceding gene: 17547650

Following gene: 17547647

Centisome position: 85.04

GC content: 63.05

Gene sequence:

>609_bases
ATGAGTGACCAGCAAAACGTGGACAAGGGTCGCCGTAATCTGCTGATTGCGACGTCCGTGGCTGGTGGTGTGGGAGGGGT
AGCAGTGGCGGCCCCTTTCGTTTGCACATTCGCACCATCTGAGAAGGCCCGCGCGGCGGGCGCGCCCATCGAGGCGGACG
TGAGCGACTTGGCCCCCGGCCAGATGAAGGTGGTGGAATGGCGCGGCAAGCCGGTCTGGCTGCTCAAGCGTACCCCCGAG
ATGCTGGAATCCCTCAAGAAGACCGACACCGAAGTCGCCGACCCCAAGTCCGACGTGCCCTTCACCATGAAGACGCCGGA
TTACTGCAAGAACGAAACCCGCTCCCGCGCCGAACACAAGGACCTGCTGGTCGTGGTCGGCATCTGCTCCCACCTTGGCT
GCTCGCCGTCCGGCCCGTTTGTTTCCGGTGCCAATGCCCAGCTCGGCGCTGATCCCGGCTTTGTCTGTCCCTGCCACGGT
TCCACGTTCGATCTGGCCGGCCGCGTCTTCAAGAACAAGCCGGCGCCGCAGAACCTGGACGTCCCCCCCTACATGTTCCT
GTCCGATACGAAGCTGGTGATCGGTAAAGACGAGAAAGGAGAGGCTTGA

Upstream 100 bases:

>100_bases
CAAGCCGTGTTGCCCGCGACCGCTATCGTTGGCTTGGTACGCTCGGGTATAATTTTCGGTTGACGCGAACCTATCTTGAT
TTCTCACCCTGGGGTCTTGA

Downstream 100 bases:

>100_bases
TCATGGCCGCTGAGAAGAAGGTGGAGACAACCGGGCTGCTGGGCTGGATCGATGCCCGCTTCCCGCTGACCGAGACATGG
AAGGCGCACCTGTCGGAGTA

Product: transmembrane ubiquinol-cytochrome C reductase (IRON-sulfur subunit) oxidoreductase

Products: NA

Alternate protein names: Rieske iron-sulfur protein; RISP [H]

Number of amino acids: Translated: 202; Mature: 201

Protein sequence:

>202_residues
MSDQQNVDKGRRNLLIATSVAGGVGGVAVAAPFVCTFAPSEKARAAGAPIEADVSDLAPGQMKVVEWRGKPVWLLKRTPE
MLESLKKTDTEVADPKSDVPFTMKTPDYCKNETRSRAEHKDLLVVVGICSHLGCSPSGPFVSGANAQLGADPGFVCPCHG
STFDLAGRVFKNKPAPQNLDVPPYMFLSDTKLVIGKDEKGEA

Sequences:

>Translated_202_residues
MSDQQNVDKGRRNLLIATSVAGGVGGVAVAAPFVCTFAPSEKARAAGAPIEADVSDLAPGQMKVVEWRGKPVWLLKRTPE
MLESLKKTDTEVADPKSDVPFTMKTPDYCKNETRSRAEHKDLLVVVGICSHLGCSPSGPFVSGANAQLGADPGFVCPCHG
STFDLAGRVFKNKPAPQNLDVPPYMFLSDTKLVIGKDEKGEA
>Mature_201_residues
SDQQNVDKGRRNLLIATSVAGGVGGVAVAAPFVCTFAPSEKARAAGAPIEADVSDLAPGQMKVVEWRGKPVWLLKRTPEM
LESLKKTDTEVADPKSDVPFTMKTPDYCKNETRSRAEHKDLLVVVGICSHLGCSPSGPFVSGANAQLGADPGFVCPCHGS
TFDLAGRVFKNKPAPQNLDVPPYMFLSDTKLVIGKDEKGEA

Specific function: Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis [H]

COG id: COG0723

COG function: function code C; Rieske Fe-S protein

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Rieske domain [H]

Homologues:

Organism=Homo sapiens, GI163644321, Length=175, Percent_Identity=35.4285714285714, Blast_Score=96, Evalue=3e-20,
Organism=Caenorhabditis elegans, GI17540418, Length=196, Percent_Identity=36.734693877551, Blast_Score=95, Evalue=3e-20,
Organism=Saccharomyces cerevisiae, GI6320811, Length=199, Percent_Identity=33.1658291457286, Blast_Score=100, Evalue=3e-22,
Organism=Drosophila melanogaster, GI24580896, Length=167, Percent_Identity=37.7245508982036, Blast_Score=94, Evalue=5e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017941
- InterPro:   IPR014349
- InterPro:   IPR005805
- InterPro:   IPR019470
- InterPro:   IPR006317 [H]

Pfam domain/function: PF00355 Rieske; PF10399 UCR_Fe-S_N [H]

EC number: =1.10.2.2 [H]

Molecular weight: Translated: 21484; Mature: 21353

Theoretical pI: Translated: 7.30; Mature: 7.30

Prosite motif: PS00200 RIESKE_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDQQNVDKGRRNLLIATSVAGGVGGVAVAAPFVCTFAPSEKARAAGAPIEADVSDLAPG
CCCCCCHHCCCCEEEEEEECCCCCCHHHHHHCEEEEECCCCHHHHCCCCCCCCHHHCCCC
QMKVVEWRGKPVWLLKRTPEMLESLKKTDTEVADPKSDVPFTMKTPDYCKNETRSRAEHK
CEEEEEECCCEEEEEECCHHHHHHHHHCCCCCCCCCCCCCEEECCCHHHHHHHHHHHHHC
DLLVVVGICSHLGCSPSGPFVSGANAQLGADPGFVCPCHGSTFDLAGRVFKNKPAPQNLD
CEEEEEEHHHHCCCCCCCCEEECCCCCCCCCCCEEEECCCCHHHHHHHHHCCCCCCCCCC
VPPYMFLSDTKLVIGKDEKGEA
CCCEEEECCCEEEEECCCCCCC
>Mature Secondary Structure 
SDQQNVDKGRRNLLIATSVAGGVGGVAVAAPFVCTFAPSEKARAAGAPIEADVSDLAPG
CCCCCHHCCCCEEEEEEECCCCCCHHHHHHCEEEEECCCCHHHHCCCCCCCCHHHCCCC
QMKVVEWRGKPVWLLKRTPEMLESLKKTDTEVADPKSDVPFTMKTPDYCKNETRSRAEHK
CEEEEEECCCEEEEEECCHHHHHHHHHCCCCCCCCCCCCCEEECCCHHHHHHHHHHHHHC
DLLVVVGICSHLGCSPSGPFVSGANAQLGADPGFVCPCHGSTFDLAGRVFKNKPAPQNLD
CEEEEEEHHHHCCCCCCCCEEECCCCCCCCCCCEEEECCCCHHHHHHHHHCCCCCCCCCC
VPPYMFLSDTKLVIGKDEKGEA
CCCEEEECCCEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA