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The map label for this gene is petB [H]

Identifier: 17547647

GI number: 17547647

Start: 3158487

End: 3159890

Strand: Reverse

Name: petB [H]

Synonym: RSc2928

Alternate gene names: 17547647

Gene position: 3159890-3158487 (Counterclockwise)

Preceding gene: 17547648

Following gene: 17547646

Centisome position: 85.03

GC content: 63.39

Gene sequence:

>1404_bases
ATGGCCGCTGAGAAGAAGGTGGAGACAACCGGGCTGCTGGGCTGGATCGATGCCCGCTTCCCGCTGACCGAGACATGGAA
GGCGCACCTGTCGGAGTACTACGCGCCCAAGAATTTCAATTTCTGGTACTTCTTCGGTTCGCTGGCGCTGCTGGTGCTGG
TGATCCAGATCGTCACCGGGATCTTCCTCGTGATGAACTACAAGCCGGACGGCACGCTCAACGCCGCCGGCATCCCGGTC
GCCTACGCGAGCGTGGAGTTCATCATGCGCGAGGTGCCGTGGGGCTGGCTGGTGCGATACATGCACTCGACCGGCGCCTC
GGCATTCTTCATCGTGGTCTACCTGCACATGTTCCGCGGGATGCTGTACGGCTCGTACCGCAAGCCACGCGAGCTGGTCT
GGATCTTCGGCTGCCTGATCTTCCTGTGCCTGATGGCCGAGGCCTTCATGGGCTATCTGCTGCCCTGGGGCCAGATGTCG
TACTGGGGCGCGCAGGTGATCGTGAACCTGTTCTCCGCCATCCCGCTGATCGGGCCGGATCTGTCGCTGTGGATCCGCGG
CGACTACGTCGTGTCGGACGCGACGCTGAACCGCTTCTTCTCGTTCCACGTCATCGCCGTGCCGCTGGTGCTGCTGGGCC
TGGTGGTGGCGCACATCATCGCGCTGCACGAGGTGGGCTCGAACAACCCGGACGGCGTCGAGATCAAGGCCAAGAAGGAC
GAGCGCGGTATTCCGCTCGATGGCATCCCGTTCCACCCGTACTACTCGGTGCATGACATCGTCGGCGTGGCGGTGTTCCT
GTTCCTCTTCAGCGCGATCCTGTTCTTCGCGCCGGAAATGGGCGGCTACTTCCTGGAGGCCAACAACTTCATCCCGGCGG
ATTCGCTGAAGACGCCGCCGCACATCGCGCCGGTGTGGTACTTCACGCCGTTCTACTCGATGCTGCGCGCGACGACGTCG
GCTTTCCTGCCGATCCTGTGGGGGTTCCTGGCGATCATGTTGGGCCTGCTGTTCGTGCGCTGCAAGAGCATGAAGATCAA
GGGCGTGGCCGTGGCGGTCGCCGTGATCCTGGCGCTGGGCTTTGCTTTCATCGACGCCAAGTTCTGGGGCGTGGTGGTGA
TGGGCGGCTCGGTGGTGATCTTCTTCTTCATGCCGTGGCTGGACCAGTCGCCGGTCAAGTCGATCCGCTATCGCCCGGGC
TTCCACAAGGTGCTGCTGGGGATCTTCGTGGTGGCCTTCGCGGTGCTCGGCTACCTCGGCATCCAGCCGCCTAGCCCGGC
GGGCTCGATCGTGTCGCAGATCGGCACCATCGTGTACTTTGCGTTCTTCCTCGCGATGCCGGTCTGGAGCCGGATGGGGA
CGTTCAAGCCGGTGCCCGAGCGTGTCACGTTCAAGCCGCACTGA

Upstream 100 bases:

>100_bases
AGAACAAGCCGGCGCCGCAGAACCTGGACGTCCCCCCCTACATGTTCCTGTCCGATACGAAGCTGGTGATCGGTAAAGAC
GAGAAAGGAGAGGCTTGATC

Downstream 100 bases:

>100_bases
TTCCAGCCGAGGATAAGGACACAAGAATGAAAAAGCTGCTTGCGATTTTCGCCTTGGCCGGCTTCATGATTGCGGCCCCC
GTCTTCGCCAATGAGGGCGG

Product: cytochrome B subunit transmembrane protein

Products: Q; ferrocytochrome c

Alternate protein names: NA

Number of amino acids: Translated: 467; Mature: 466

Protein sequence:

>467_residues
MAAEKKVETTGLLGWIDARFPLTETWKAHLSEYYAPKNFNFWYFFGSLALLVLVIQIVTGIFLVMNYKPDGTLNAAGIPV
AYASVEFIMREVPWGWLVRYMHSTGASAFFIVVYLHMFRGMLYGSYRKPRELVWIFGCLIFLCLMAEAFMGYLLPWGQMS
YWGAQVIVNLFSAIPLIGPDLSLWIRGDYVVSDATLNRFFSFHVIAVPLVLLGLVVAHIIALHEVGSNNPDGVEIKAKKD
ERGIPLDGIPFHPYYSVHDIVGVAVFLFLFSAILFFAPEMGGYFLEANNFIPADSLKTPPHIAPVWYFTPFYSMLRATTS
AFLPILWGFLAIMLGLLFVRCKSMKIKGVAVAVAVILALGFAFIDAKFWGVVVMGGSVVIFFFMPWLDQSPVKSIRYRPG
FHKVLLGIFVVAFAVLGYLGIQPPSPAGSIVSQIGTIVYFAFFLAMPVWSRMGTFKPVPERVTFKPH

Sequences:

>Translated_467_residues
MAAEKKVETTGLLGWIDARFPLTETWKAHLSEYYAPKNFNFWYFFGSLALLVLVIQIVTGIFLVMNYKPDGTLNAAGIPV
AYASVEFIMREVPWGWLVRYMHSTGASAFFIVVYLHMFRGMLYGSYRKPRELVWIFGCLIFLCLMAEAFMGYLLPWGQMS
YWGAQVIVNLFSAIPLIGPDLSLWIRGDYVVSDATLNRFFSFHVIAVPLVLLGLVVAHIIALHEVGSNNPDGVEIKAKKD
ERGIPLDGIPFHPYYSVHDIVGVAVFLFLFSAILFFAPEMGGYFLEANNFIPADSLKTPPHIAPVWYFTPFYSMLRATTS
AFLPILWGFLAIMLGLLFVRCKSMKIKGVAVAVAVILALGFAFIDAKFWGVVVMGGSVVIFFFMPWLDQSPVKSIRYRPG
FHKVLLGIFVVAFAVLGYLGIQPPSPAGSIVSQIGTIVYFAFFLAMPVWSRMGTFKPVPERVTFKPH
>Mature_466_residues
AAEKKVETTGLLGWIDARFPLTETWKAHLSEYYAPKNFNFWYFFGSLALLVLVIQIVTGIFLVMNYKPDGTLNAAGIPVA
YASVEFIMREVPWGWLVRYMHSTGASAFFIVVYLHMFRGMLYGSYRKPRELVWIFGCLIFLCLMAEAFMGYLLPWGQMSY
WGAQVIVNLFSAIPLIGPDLSLWIRGDYVVSDATLNRFFSFHVIAVPLVLLGLVVAHIIALHEVGSNNPDGVEIKAKKDE
RGIPLDGIPFHPYYSVHDIVGVAVFLFLFSAILFFAPEMGGYFLEANNFIPADSLKTPPHIAPVWYFTPFYSMLRATTSA
FLPILWGFLAIMLGLLFVRCKSMKIKGVAVAVAVILALGFAFIDAKFWGVVVMGGSVVIFFFMPWLDQSPVKSIRYRPGF
HKVLLGIFVVAFAVLGYLGIQPPSPAGSIVSQIGTIVYFAFFLAMPVWSRMGTFKPVPERVTFKPH

Specific function: Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis [H]

COG id: COG1290

COG function: function code C; Cytochrome b subunit of the bc complex

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome b family [H]

Homologues:

Organism=Homo sapiens, GI251831119, Length=412, Percent_Identity=36.1650485436893, Blast_Score=240, Evalue=2e-63,
Organism=Saccharomyces cerevisiae, GI6226529, Length=313, Percent_Identity=41.5335463258786, Blast_Score=231, Evalue=1e-61,
Organism=Saccharomyces cerevisiae, GI6226532, Length=248, Percent_Identity=43.9516129032258, Blast_Score=201, Evalue=3e-52,
Organism=Saccharomyces cerevisiae, GI6226531, Length=159, Percent_Identity=49.0566037735849, Blast_Score=147, Evalue=3e-36,
Organism=Saccharomyces cerevisiae, GI6226530, Length=144, Percent_Identity=46.5277777777778, Blast_Score=120, Evalue=3e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016175
- InterPro:   IPR005798
- InterPro:   IPR005797
- InterPro:   IPR016174 [H]

Pfam domain/function: PF00032 Cytochrom_B_C; PF00033 Cytochrom_B_N [H]

EC number: 1.10.2.2

Molecular weight: Translated: 52325; Mature: 52194

Theoretical pI: Translated: 9.34; Mature: 9.34

Prosite motif: PS51002 CYTB_NTER ; PS51003 CYTB_CTER

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAAEKKVETTGLLGWIDARFPLTETWKAHLSEYYAPKNFNFWYFFGSLALLVLVIQIVTG
CCCCCCCHHHCCEEEECCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH
IFLVMNYKPDGTLNAAGIPVAYASVEFIMREVPWGWLVRYMHSTGASAFFIVVYLHMFRG
HHEEEECCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHH
MLYGSYRKPRELVWIFGCLIFLCLMAEAFMGYLLPWGQMSYWGAQVIVNLFSAIPLIGPD
HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCC
LSLWIRGDYVVSDATLNRFFSFHVIAVPLVLLGLVVAHIIALHEVGSNNPDGVEIKAKKD
CEEEEECCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCC
ERGIPLDGIPFHPYYSVHDIVGVAVFLFLFSAILFFAPEMGGYFLEANNFIPADSLKTPP
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCC
HIAPVWYFTPFYSMLRATTSAFLPILWGFLAIMLGLLFVRCKSMKIKGVAVAVAVILALG
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
FAFIDAKFWGVVVMGGSVVIFFFMPWLDQSPVKSIRYRPGFHKVLLGIFVVAFAVLGYLG
HHHHHHHHHEEEEECCCEEEEHHHHCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHC
IQPPSPAGSIVSQIGTIVYFAFFLAMPVWSRMGTFKPVPERVTFKPH
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
AAEKKVETTGLLGWIDARFPLTETWKAHLSEYYAPKNFNFWYFFGSLALLVLVIQIVTG
CCCCCCHHHCCEEEECCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH
IFLVMNYKPDGTLNAAGIPVAYASVEFIMREVPWGWLVRYMHSTGASAFFIVVYLHMFRG
HHEEEECCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHH
MLYGSYRKPRELVWIFGCLIFLCLMAEAFMGYLLPWGQMSYWGAQVIVNLFSAIPLIGPD
HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCC
LSLWIRGDYVVSDATLNRFFSFHVIAVPLVLLGLVVAHIIALHEVGSNNPDGVEIKAKKD
CEEEEECCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCC
ERGIPLDGIPFHPYYSVHDIVGVAVFLFLFSAILFFAPEMGGYFLEANNFIPADSLKTPP
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCC
HIAPVWYFTPFYSMLRATTSAFLPILWGFLAIMLGLLFVRCKSMKIKGVAVAVAVILALG
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
FAFIDAKFWGVVVMGGSVVIFFFMPWLDQSPVKSIRYRPGFHKVLLGIFVVAFAVLGYLG
HHHHHHHHHEEEEECCCEEEEHHHHCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHC
IQPPSPAGSIVSQIGTIVYFAFFLAMPVWSRMGTFKPVPERVTFKPH
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: QH2; ferricytochrome c

Specific reaction: QH2 + 2 ferricytochrome c = Q + 2 ferrocytochrome c

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA