| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
Click here to switch to the map view.
The map label for this gene is 17547631
Identifier: 17547631
GI number: 17547631
Start: 3138768
End: 3138995
Strand: Direct
Name: 17547631
Synonym: RSc2912
Alternate gene names: NA
Gene position: 3138768-3138995 (Clockwise)
Preceding gene: 17547630
Following gene: 17547637
Centisome position: 84.46
GC content: 65.79
Gene sequence:
>228_bases ATGGCCGACGACGTCGTCATCACGGCCCGCAACAACGGGCCGTATCACATCAAGGGTAGCTTCCGCATCGTCACCCAGGG CGGGCGTGAATTGCCGGTGGAGCAAGGACAGGCGTGGCTGTGCCGCTGCGGCCATTCGCTGAACAAGCCGTTCTGCGACG GCTCGCACAAGCGCGTCGAGTTCGACAGCAATCTCGACGCGCCCGCGGCGCCTGAGCCTCCGGCTTAG
Upstream 100 bases:
>100_bases GACCAGTTCATGGCCCTGATGCGCGACGCGCAGACCGCGCGCTTCGCTCATCGCATGCAGGGCATCCTGTTCTGACCCAG GCGGGAGACGGGAGACGGCC
Downstream 100 bases:
>100_bases CGGATGACGGGCTTGTAGCGGATGCGCTTGGGCTTGGCACCTTCCTCGCCCAAGCGCTTCTTCTTGTCCGCTTCGTATTC CTGGTAGTTGCCCGGGAAGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 75; Mature: 74
Protein sequence:
>75_residues MADDVVITARNNGPYHIKGSFRIVTQGGRELPVEQGQAWLCRCGHSLNKPFCDGSHKRVEFDSNLDAPAAPEPPA
Sequences:
>Translated_75_residues MADDVVITARNNGPYHIKGSFRIVTQGGRELPVEQGQAWLCRCGHSLNKPFCDGSHKRVEFDSNLDAPAAPEPPA >Mature_74_residues ADDVVITARNNGPYHIKGSFRIVTQGGRELPVEQGQAWLCRCGHSLNKPFCDGSHKRVEFDSNLDAPAAPEPPA
Specific function: Unknown
COG id: COG3369
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8174; Mature: 8043
Theoretical pI: Translated: 6.77; Mature: 6.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 4.1 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADDVVITARNNGPYHIKGSFRIVTQGGRELPVEQGQAWLCRCGHSLNKPFCDGSHKRVE CCCCEEEEEECCCCEEEECCEEEEECCCEECCCCCCCEEEEECCCCCCCCCCCCCCCEEE FDSNLDAPAAPEPPA ECCCCCCCCCCCCCC >Mature Secondary Structure ADDVVITARNNGPYHIKGSFRIVTQGGRELPVEQGQAWLCRCGHSLNKPFCDGSHKRVE CCCEEEEEECCCCEEEECCEEEEECCCEECCCCCCCEEEEECCCCCCCCCCCCCCCEEE FDSNLDAPAAPEPPA ECCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA