Click here to switch to the map view.

The map label for this gene is yhdH [H]

Identifier: 17547610

GI number: 17547610

Start: 3119842

End: 3120858

Strand: Reverse

Name: yhdH [H]

Synonym: RSc2891

Alternate gene names: 17547610

Gene position: 3120858-3119842 (Counterclockwise)

Preceding gene: 17547611

Following gene: 17547609

Centisome position: 83.98

GC content: 72.76

Gene sequence:

>1017_bases
ATGTCGTTTCGCGCGCTGATGCTGGAAAAACAGGAAGGCGGGACGCTGGCCCGGGTGACGGACCTGGACGATGCCGCGCT
GTCCTCGCCCGAGGCGCTCGCCGATGCGCTGACCGCTGGCGACGTGCTGGTCCGCATCGACTGGTCGACCATCAACTACA
AGGACGGCCTGGCCATCACCGGCCGCGGCCCGGTGGTGCGCAAGTGGCCGATGGTGGCCGGCATCGACGGTGCCGGCACG
GTCATCGAATCGTCGCACCCGGACTGGAAGGCGGGCGATGCGGTGGTGCTCAACGGCTGGGGCGTCGGCGAGACGCACTG
GGGCTGCCTGGCGCAGCGGGCACGGCTGTCGGGCGACTGGCTGGTGGCGCTGCCGGCCGGGCTCGACACGCGCGCCGCCA
TGGCGATCGGCACGGCCGGCTATACGGCGATGCTGTCGGTGCTGGCGCTCGAGCGCAGCGGCGTGACGCCGGGCGACGGC
GAGGTGCTGGTGACCGGCGCGTCGGGCGGTGTCGGTTCGATCGCCATCGCGGTGCTGGGCAAGCTCGGCCACCGCGTGGT
GGCCTCCACCGGCAAGCTTGCCGAAGCCGATTTCCTGCGCGCGCTGGGCGCCGCCGAGGTGATCGACCGCGCCGAGCTGT
CGGCGCCCGGCAAGCCGCTGCAGAAGGAGCGCTGGGCGGCGGTGGTCGATTCGGTCGGCTCGCACACGCTGGCCAATGCC
TGTGCGCAGGTACGCCACGGCGGTATCGTCACCGCCTGCGGGCTGGCGCAGGGCATGGAGTTTCCGGCGACGGTCGCGCC
GTTCATCCTGCGCGGCGTGACGCTGCACGGCATCAACAGCGTGACCGCGCCGCGCGCATTGCGGCAGACCGCCTGGCAGC
GCCTGGCGGCCGATCTGGCGCCGGCGCGCCTGGCCGCCATTACGCGCGAGATCGCGCTGGGCGAGGCCATCGGCGCGGCG
CACGACATCCTGGCCGGCAGGATGCGCGGGCGGGTGGTGGTGGACGTCAACCGATAG

Upstream 100 bases:

>100_bases
ACGCTGGAACGCAAGTTCGCGTCGCTGAAGAAGTCGTGATCCAGAGCGCCGGTTGCACCCGGCGCTTTTTTCTTTGCCCG
CCGCCACCCGGAGGCCGCCC

Downstream 100 bases:

>100_bases
GCGCAGATCGGGCGATCCGGCATCGGCGCCGTGGGACGGCAACGCTACAATGTCCGCACCATGAAGCCGATCCGCTACAC
CATCGCCCCCGCCGCGCCCG

Product: oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 338; Mature: 337

Protein sequence:

>338_residues
MSFRALMLEKQEGGTLARVTDLDDAALSSPEALADALTAGDVLVRIDWSTINYKDGLAITGRGPVVRKWPMVAGIDGAGT
VIESSHPDWKAGDAVVLNGWGVGETHWGCLAQRARLSGDWLVALPAGLDTRAAMAIGTAGYTAMLSVLALERSGVTPGDG
EVLVTGASGGVGSIAIAVLGKLGHRVVASTGKLAEADFLRALGAAEVIDRAELSAPGKPLQKERWAAVVDSVGSHTLANA
CAQVRHGGIVTACGLAQGMEFPATVAPFILRGVTLHGINSVTAPRALRQTAWQRLAADLAPARLAAITREIALGEAIGAA
HDILAGRMRGRVVVDVNR

Sequences:

>Translated_338_residues
MSFRALMLEKQEGGTLARVTDLDDAALSSPEALADALTAGDVLVRIDWSTINYKDGLAITGRGPVVRKWPMVAGIDGAGT
VIESSHPDWKAGDAVVLNGWGVGETHWGCLAQRARLSGDWLVALPAGLDTRAAMAIGTAGYTAMLSVLALERSGVTPGDG
EVLVTGASGGVGSIAIAVLGKLGHRVVASTGKLAEADFLRALGAAEVIDRAELSAPGKPLQKERWAAVVDSVGSHTLANA
CAQVRHGGIVTACGLAQGMEFPATVAPFILRGVTLHGINSVTAPRALRQTAWQRLAADLAPARLAAITREIALGEAIGAA
HDILAGRMRGRVVVDVNR
>Mature_337_residues
SFRALMLEKQEGGTLARVTDLDDAALSSPEALADALTAGDVLVRIDWSTINYKDGLAITGRGPVVRKWPMVAGIDGAGTV
IESSHPDWKAGDAVVLNGWGVGETHWGCLAQRARLSGDWLVALPAGLDTRAAMAIGTAGYTAMLSVLALERSGVTPGDGE
VLVTGASGGVGSIAIAVLGKLGHRVVASTGKLAEADFLRALGAAEVIDRAELSAPGKPLQKERWAAVVDSVGSHTLANAC
AQVRHGGIVTACGLAQGMEFPATVAPFILRGVTLHGINSVTAPRALRQTAWQRLAADLAPARLAAITREIALGEAIGAAH
DILAGRMRGRVVVDVNR

Specific function: Unknown

COG id: COG0604

COG function: function code CR; NADPH:quinone reductase and related Zn-dependent oxidoreductases

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the zinc-containing alcohol dehydrogenase family. Quinone oxidoreductase subfamily [H]

Homologues:

Organism=Escherichia coli, GI1789651, Length=335, Percent_Identity=52.5373134328358, Blast_Score=342, Evalue=2e-95,
Organism=Caenorhabditis elegans, GI71988145, Length=358, Percent_Identity=27.0949720670391, Blast_Score=71, Evalue=1e-12,
Organism=Saccharomyces cerevisiae, GI6319621, Length=260, Percent_Identity=27.3076923076923, Blast_Score=65, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013149
- InterPro:   IPR013154
- InterPro:   IPR002085
- InterPro:   IPR011032
- InterPro:   IPR016040
- InterPro:   IPR014188 [H]

Pfam domain/function: PF08240 ADH_N; PF00107 ADH_zinc_N [H]

EC number: NA

Molecular weight: Translated: 34874; Mature: 34743

Theoretical pI: Translated: 7.20; Mature: 7.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFRALMLEKQEGGTLARVTDLDDAALSSPEALADALTAGDVLVRIDWSTINYKDGLAIT
CCCCEEEEEECCCCCEEEEECCCHHHCCCHHHHHHHHCCCCEEEEEECCEECCCCCEEEE
GRGPVVRKWPMVAGIDGAGTVIESSHPDWKAGDAVVLNGWGVGETHWGCLAQRARLSGDW
CCCCCEEECCCEECCCCCCCEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCE
LVALPAGLDTRAAMAIGTAGYTAMLSVLALERSGVTPGDGEVLVTGASGGVGSIAIAVLG
EEEECCCCCCHHHHEECCCCHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHH
KLGHRVVASTGKLAEADFLRALGAAEVIDRAELSAPGKPLQKERWAAVVDSVGSHTLANA
HHCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCHHHHHH
CAQVRHGGIVTACGLAQGMEFPATVAPFILRGVTLHGINSVTAPRALRQTAWQRLAADLA
HHHHHCCCEEEECHHHCCCCCCHHHHHHHHHCCEEECCCCCHHHHHHHHHHHHHHHHHHH
PARLAAITREIALGEAIGAAHDILAGRMRGRVVVDVNR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECC
>Mature Secondary Structure 
SFRALMLEKQEGGTLARVTDLDDAALSSPEALADALTAGDVLVRIDWSTINYKDGLAIT
CCCEEEEEECCCCCEEEEECCCHHHCCCHHHHHHHHCCCCEEEEEECCEECCCCCEEEE
GRGPVVRKWPMVAGIDGAGTVIESSHPDWKAGDAVVLNGWGVGETHWGCLAQRARLSGDW
CCCCCEEECCCEECCCCCCCEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCE
LVALPAGLDTRAAMAIGTAGYTAMLSVLALERSGVTPGDGEVLVTGASGGVGSIAIAVLG
EEEECCCCCCHHHHEECCCCHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHH
KLGHRVVASTGKLAEADFLRALGAAEVIDRAELSAPGKPLQKERWAAVVDSVGSHTLANA
HHCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCHHHHHH
CAQVRHGGIVTACGLAQGMEFPATVAPFILRGVTLHGINSVTAPRALRQTAWQRLAADLA
HHHHHCCCEEEECHHHCCCCCCHHHHHHHHHCCEEECCCCCHHHHHHHHHHHHHHHHHHH
PARLAAITREIALGEAIGAAHDILAGRMRGRVVVDVNR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1370469; 9278503 [H]