| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
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The map label for this gene is paaK [H]
Identifier: 17547594
GI number: 17547594
Start: 3103810
End: 3105120
Strand: Direct
Name: paaK [H]
Synonym: RSc2875
Alternate gene names: 17547594
Gene position: 3103810-3105120 (Clockwise)
Preceding gene: 17547593
Following gene: 17547596
Centisome position: 83.52
GC content: 69.79
Gene sequence:
>1311_bases ATGCGCCCCCGCTTGACCGACCTGCCGCTCGATCCGATCGAAACCGCCAGCCGCGATGCCGTCCAGGCGCTGCAGCTGGA GCGGCTCCGGCACAGCCTTGCCCATGCGTACGCGAACGTGCCGGCGTACCGCGCCAAGTTCGATGCGGTGGGCGTGCATC CGTCGGACCTGCGCGCGCTTGGCGACCTGGCGAGATTTCCGTTCACCACCAAGGCGGATCTGCGGGAGAACTATCCGTTC GGCATGTTCGCCGTGCCGCAGGAGCGCATCGCGCGCATCCATGCGTCGTCGGGAACGACCGGCAAGCCGACGGTGGTGGG CTATACGCTGGCCGATATCGACACCTGGGCAGGGCTGGTGGCGCGCTCGATCCGCGCGGCGGGGGCGCGGCGCGGCGACA AGGTTCACGTCAGCTACGGCTACGGGCTCTTCACCGGCGGCCTGGGCGCGCATTACGGCGCGGAGCGCGCGGGGCTGACG GTGATTCCGTTCGGCGGCGGGCAGACGGAGCGGCAGGTGCAGCTGATCCGCGATTTCCAGCCGCAGATCATCATGGTGAC GCCCAGCTACATGCTGGCCATCGCCGACGAATTCGTACGCCAGGGGCTGGACCCGGCCCAGTCCAGCCTGCGAATCGGCA TCTTCGGCGCGGAGCCGTGGACGCCCGAGATGCGCACGGTGATCGAGGCTCGCATGGGGCTGTCGGCGGTGGACATCTAC GGCCTGTCGGAGGTGATGGGCCCGGGCGTGGCCAGCGAATGCGCCGAGACCAAGGACGGCCCGACGATCTGGGAAGACCA CTTCTACCCGGAGATCATCGACCCGGAAACCGGCACCGTGCTGCCCGACGGCGCGTTCGGCGAGCTGGTCTTCACGTCGC TCACCAAGGAGGCGATGCCGGTGGTCCGCTACCGCACGCGCGACCTGACGCGCCTGCTGCCGGGCACGGCGCGGCCGGCT TTCCGCCGCATGGAGAAGATCACGGGCCGCTGCGACGACATGATGATCGTGCGGGGCGTGAATGTGTTCCCGTCGCAGAT CGAGGAACTGATCCTGAAGCACGCGGCGCTGTCGCCGCACTACCAGTGCGTGCTGGCCAAGGAAGGCCCGCTCGATACGC TGACGGTGCGGGTGGAGGCGGCGCTCGGGACGCCGGCCGAGGTGGCGGACGCAGCCGGCGGACAGCTGGCGCACGACATC AAGGCGATGATCGGCGTGACTGCGGCGATCGAGCTGCTGGCCGTCGGCGGGGTCGAGCGCTCGGTCGGGAAGGCGCGCCG CGTGGTGGATCTGCGGCGCGGCCAGCCGTAG
Upstream 100 bases:
>100_bases ACGTCATCCCCGTTCCGGACAGCGGCGACCGCTGATCCCCTCCTATATATAGAGAGTTGCCACGACATGGGCCCGCCCGA TGGTGCCCAAGGAGACCTGC
Downstream 100 bases:
>100_bases CCGCTAGCGCGAGGCCACGCCGACGGGGCTGCCCTTCGGCACCAGCACCCACAGCCGGCCGGCCTGCTTCATGCGGCCGG CCAGGTCGCCTGCCGCGTCG
Product: phenylacetyl-CoA-ligase
Products: NA
Alternate protein names: Phenylacetyl-CoA ligase; PA-CoA ligase [H]
Number of amino acids: Translated: 436; Mature: 436
Protein sequence:
>436_residues MRPRLTDLPLDPIETASRDAVQALQLERLRHSLAHAYANVPAYRAKFDAVGVHPSDLRALGDLARFPFTTKADLRENYPF GMFAVPQERIARIHASSGTTGKPTVVGYTLADIDTWAGLVARSIRAAGARRGDKVHVSYGYGLFTGGLGAHYGAERAGLT VIPFGGGQTERQVQLIRDFQPQIIMVTPSYMLAIADEFVRQGLDPAQSSLRIGIFGAEPWTPEMRTVIEARMGLSAVDIY GLSEVMGPGVASECAETKDGPTIWEDHFYPEIIDPETGTVLPDGAFGELVFTSLTKEAMPVVRYRTRDLTRLLPGTARPA FRRMEKITGRCDDMMIVRGVNVFPSQIEELILKHAALSPHYQCVLAKEGPLDTLTVRVEAALGTPAEVADAAGGQLAHDI KAMIGVTAAIELLAVGGVERSVGKARRVVDLRRGQP
Sequences:
>Translated_436_residues MRPRLTDLPLDPIETASRDAVQALQLERLRHSLAHAYANVPAYRAKFDAVGVHPSDLRALGDLARFPFTTKADLRENYPF GMFAVPQERIARIHASSGTTGKPTVVGYTLADIDTWAGLVARSIRAAGARRGDKVHVSYGYGLFTGGLGAHYGAERAGLT VIPFGGGQTERQVQLIRDFQPQIIMVTPSYMLAIADEFVRQGLDPAQSSLRIGIFGAEPWTPEMRTVIEARMGLSAVDIY GLSEVMGPGVASECAETKDGPTIWEDHFYPEIIDPETGTVLPDGAFGELVFTSLTKEAMPVVRYRTRDLTRLLPGTARPA FRRMEKITGRCDDMMIVRGVNVFPSQIEELILKHAALSPHYQCVLAKEGPLDTLTVRVEAALGTPAEVADAAGGQLAHDI KAMIGVTAAIELLAVGGVERSVGKARRVVDLRRGQP >Mature_436_residues MRPRLTDLPLDPIETASRDAVQALQLERLRHSLAHAYANVPAYRAKFDAVGVHPSDLRALGDLARFPFTTKADLRENYPF GMFAVPQERIARIHASSGTTGKPTVVGYTLADIDTWAGLVARSIRAAGARRGDKVHVSYGYGLFTGGLGAHYGAERAGLT VIPFGGGQTERQVQLIRDFQPQIIMVTPSYMLAIADEFVRQGLDPAQSSLRIGIFGAEPWTPEMRTVIEARMGLSAVDIY GLSEVMGPGVASECAETKDGPTIWEDHFYPEIIDPETGTVLPDGAFGELVFTSLTKEAMPVVRYRTRDLTRLLPGTARPA FRRMEKITGRCDDMMIVRGVNVFPSQIEELILKHAALSPHYQCVLAKEGPLDTLTVRVEAALGTPAEVADAAGGQLAHDI KAMIGVTAAIELLAVGGVERSVGKARRVVDLRRGQP
Specific function: Catalyzes the activation of phenylacetic acid to phenylacetyl-CoA [H]
COG id: COG1541
COG function: function code H; Coenzyme F390 synthetase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1787664, Length=433, Percent_Identity=64.6651270207852, Blast_Score=575, Evalue=1e-165,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000873 - InterPro: IPR011880 [H]
Pfam domain/function: PF00501 AMP-binding [H]
EC number: =6.2.1.30 [H]
Molecular weight: Translated: 47309; Mature: 47309
Theoretical pI: Translated: 6.86; Mature: 6.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRPRLTDLPLDPIETASRDAVQALQLERLRHSLAHAYANVPAYRAKFDAVGVHPSDLRAL CCCCCCCCCCCCHHHCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCHHHHHHH GDLARFPFTTKADLRENYPFGMFAVPQERIARIHASSGTTGKPTVVGYTLADIDTWAGLV HHHHHCCCCCCHHHHCCCCCCEEECCHHHHHEEECCCCCCCCCEEEEEEHHHHHHHHHHH ARSIRAAGARRGDKVHVSYGYGLFTGGLGAHYGAERAGLTVIPFGGGQTERQVQLIRDFQ HHHHHHHCCCCCCEEEEEECCCEEECCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHCCC PQIIMVTPSYMLAIADEFVRQGLDPAQSSLRIGIFGAEPWTPEMRTVIEARMGLSAVDIY CCEEEECCHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHCCCHHHHH GLSEVMGPGVASECAETKDGPTIWEDHFYPEIIDPETGTVLPDGAFGELVFTSLTKEAMP CHHHHHCCCHHHHHHCCCCCCCEECCCCCCCEECCCCCCCCCCCCHHHHHHHHHHHHHHH VVRYRTRDLTRLLPGTARPAFRRMEKITGRCDDMMIVRGVNVFPSQIEELILKHAALSPH HHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCC YQCVLAKEGPLDTLTVRVEAALGTPAEVADAAGGQLAHDIKAMIGVTAAIELLAVGGVER EEEEEECCCCCCEEEEEEEECCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCHH SVGKARRVVDLRRGQP HHHHHHHHHHHHCCCC >Mature Secondary Structure MRPRLTDLPLDPIETASRDAVQALQLERLRHSLAHAYANVPAYRAKFDAVGVHPSDLRAL CCCCCCCCCCCCHHHCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCHHHHHHH GDLARFPFTTKADLRENYPFGMFAVPQERIARIHASSGTTGKPTVVGYTLADIDTWAGLV HHHHHCCCCCCHHHHCCCCCCEEECCHHHHHEEECCCCCCCCCEEEEEEHHHHHHHHHHH ARSIRAAGARRGDKVHVSYGYGLFTGGLGAHYGAERAGLTVIPFGGGQTERQVQLIRDFQ HHHHHHHCCCCCCEEEEEECCCEEECCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHCCC PQIIMVTPSYMLAIADEFVRQGLDPAQSSLRIGIFGAEPWTPEMRTVIEARMGLSAVDIY CCEEEECCHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHCCCHHHHH GLSEVMGPGVASECAETKDGPTIWEDHFYPEIIDPETGTVLPDGAFGELVFTSLTKEAMP CHHHHHCCCHHHHHHCCCCCCCEECCCCCCCEECCCCCCCCCCCCHHHHHHHHHHHHHHH VVRYRTRDLTRLLPGTARPAFRRMEKITGRCDDMMIVRGVNVFPSQIEELILKHAALSPH HHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCC YQCVLAKEGPLDTLTVRVEAALGTPAEVADAAGGQLAHDIKAMIGVTAAIELLAVGGVER EEEEEECCCCCCEEEEEEEECCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCHH SVGKARRVVDLRRGQP HHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9748275; 9278503; 10766858 [H]