| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
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The map label for this gene is fruA [H]
Identifier: 17547582
GI number: 17547582
Start: 3085106
End: 3086827
Strand: Direct
Name: fruA [H]
Synonym: RSc2863
Alternate gene names: 17547582
Gene position: 3085106-3086827 (Clockwise)
Preceding gene: 17547581
Following gene: 17547583
Centisome position: 83.01
GC content: 72.65
Gene sequence:
>1722_bases ATGCCCCATCTGTTGGCAATTCTCGGCGCGGACAGCCACAGCACGCGCCCCCTGCTGGCCGGCGAAGCGCTGCGGCATGC GGCGCAGCAAGCCGGCTGCCGGCTCGACGTGGACGTGCGCACACCCGACACCCTGTCGGCGGTGGCCGCCACCGCGCTGG CCAACGCCGACGCGGTGGTGTGGGCCGGTGTCGCGCCCGACGCCGCCGCGCGCCAGGCCAATCCGCGCATGATCGAGGTG GCCCTCGACGATGTGCTGGCCGATGCCCGCGCCGTGCTGGCGCGCATGCTGGACAGCCACCCCGCCCCGCCCACCGCGGC CGAACAAGGCCGGCGCATCGTCGCCATCACCTCGTGCCCGACCGGCATCGCCCATACTTTCATGGCCGCCGAGGCGCTGA CCCAGGCAGCCAGCGCGCTCGGCCACCCCATCCATGTCGAGACGCAGGGCTCGGTGGGGGCGCAGAACACCTTGTCGGCC GACGCGATCGCCCAGGCAGACATCGTGCTGATCGCGGCAGACACGCAGGTCGATCTGTCGCGCTTCGAGGGCAAGCGCGT CTTCCGCAGCGGCACCAAGGCCGCCATCCACGACGGGCAGGCGCTGATCCGCCGCGCGCTGGCCGAGGCCGCCATCGCCG CGCCCAGCGGGCAGGTCCAGGCCGATGCCGGCGCGAACGCAACCCCCGCCGAACAGCAGCGCACCGGACCTTACAAACAC CTGATGACCGGAGTGTCGTTCATGCTGCCTTTCGTGGTAGCCGGCGGCATCCTGATCGCGCTGGCCTTTGCCGTGGGCGG CATCTACGCCGCCGACGACGCGGCGCGCGGCACGCTCGGCTGGGCCCTGTTCCAGATTGGCGCCAAGTCCGCCTTTGCGC TGATGGTGCCGGCGCTGGCCGGGTACATCGCCTACTCCGTCGCCAACCGGCCCGGCATCGCCCCCGGCATGGTCGGCGGC ATGCTGGCCGCGAGCCTCGGCGCGGGCTTCCTGGGCGGCATCGTGGCCGGGTTCGTGGCCGGCTACGGCACCTCGGCGCT CAACCGGTGGCTGCGGCTGCCGCGCAACCTCGACGGCCTCAAGCCGGTGCTGATCCTGCCGGTGCTCGGCTCGCTGCTGA CAGGCCTGGTGATGCTCTATGTCGTGGGCGCGCCGGTGGCCACGCTGCTGGCCTCGCTGACCGCCTGGCTGCGCGGCATG CAGGGCGCCAACGCCGTGCCGCTGGGCGCGCTGCTGGGCGGCATGATGGCATTCGACATGGGCGGACCGGTCAACAAGGC CGCCTATGCCTTCAGCACCGGCCTCATCGGCAGCCAGGTCTACACGCCGATGGCCGCGACCATGGCCGCCGGCATGACGC CGCCGCTGGGCATCGCGCTGGCGGCCTGGCTGTTCCCCTCGCGCTTCACCGGCGAGGAACGGCAGGCCGCGCGTGCCACC GCCGTGCTCGGCCTGGCCTTCATCAGCGAAGGCGCGATCCCGTATGCCGCGCGCGATCCGCTGCGCGTCATTCCCGCGCT GGTGACCGGTTCGGCCTGTGCCGGCGCGCTGTCGATGCTGTTCGGCGTCGAGCTGCGCGTGCCCCACGGCGGCGCGTTCG TGCTGCCGATTCCCAATGCGGTCACGCACCTGGGCGGCTACGTGGTGGCGCTCGTCGCCGGCACCGTGCTGACAGCCGTG CTGCTGGCGCTGCTCAAGCGCCGCGTAGCCGCCACCGCCTGA
Upstream 100 bases:
>100_bases CCCACCTGCCGCCGCCGCAGCAAGTACGCGAGCGCGCCGCCGCCGTGCACATGCAGCGGGTGGCCTGACGCCCCGCTCAA CCGATTCCAAGGAGCTAGAC
Downstream 100 bases:
>100_bases CGCCCGCCCGCGGCGTCCATGACGCTGCTGCCCCGTATCAAAAACACCGCAGTCTTAGCAATTCCCCCCTTGCCTGTCAC GCAAGTTTGGCTATGATGGC
Product: PTS system, fructose-specific IIBC component (EIIBC-fru) (fructose-permease IIBC component) transmembrane protein
Products: NA
Alternate protein names: EIIBC-Fru; EII-Fru; Fructose-specific phosphotransferase enzyme IIB component; PTS system fructose-specific EIIB component; Fructose permease IIC component; PTS system fructose-specific EIIC component [H]
Number of amino acids: Translated: 573; Mature: 572
Protein sequence:
>573_residues MPHLLAILGADSHSTRPLLAGEALRHAAQQAGCRLDVDVRTPDTLSAVAATALANADAVVWAGVAPDAAARQANPRMIEV ALDDVLADARAVLARMLDSHPAPPTAAEQGRRIVAITSCPTGIAHTFMAAEALTQAASALGHPIHVETQGSVGAQNTLSA DAIAQADIVLIAADTQVDLSRFEGKRVFRSGTKAAIHDGQALIRRALAEAAIAAPSGQVQADAGANATPAEQQRTGPYKH LMTGVSFMLPFVVAGGILIALAFAVGGIYAADDAARGTLGWALFQIGAKSAFALMVPALAGYIAYSVANRPGIAPGMVGG MLAASLGAGFLGGIVAGFVAGYGTSALNRWLRLPRNLDGLKPVLILPVLGSLLTGLVMLYVVGAPVATLLASLTAWLRGM QGANAVPLGALLGGMMAFDMGGPVNKAAYAFSTGLIGSQVYTPMAATMAAGMTPPLGIALAAWLFPSRFTGEERQAARAT AVLGLAFISEGAIPYAARDPLRVIPALVTGSACAGALSMLFGVELRVPHGGAFVLPIPNAVTHLGGYVVALVAGTVLTAV LLALLKRRVAATA
Sequences:
>Translated_573_residues MPHLLAILGADSHSTRPLLAGEALRHAAQQAGCRLDVDVRTPDTLSAVAATALANADAVVWAGVAPDAAARQANPRMIEV ALDDVLADARAVLARMLDSHPAPPTAAEQGRRIVAITSCPTGIAHTFMAAEALTQAASALGHPIHVETQGSVGAQNTLSA DAIAQADIVLIAADTQVDLSRFEGKRVFRSGTKAAIHDGQALIRRALAEAAIAAPSGQVQADAGANATPAEQQRTGPYKH LMTGVSFMLPFVVAGGILIALAFAVGGIYAADDAARGTLGWALFQIGAKSAFALMVPALAGYIAYSVANRPGIAPGMVGG MLAASLGAGFLGGIVAGFVAGYGTSALNRWLRLPRNLDGLKPVLILPVLGSLLTGLVMLYVVGAPVATLLASLTAWLRGM QGANAVPLGALLGGMMAFDMGGPVNKAAYAFSTGLIGSQVYTPMAATMAAGMTPPLGIALAAWLFPSRFTGEERQAARAT AVLGLAFISEGAIPYAARDPLRVIPALVTGSACAGALSMLFGVELRVPHGGAFVLPIPNAVTHLGGYVVALVAGTVLTAV LLALLKRRVAATA >Mature_572_residues PHLLAILGADSHSTRPLLAGEALRHAAQQAGCRLDVDVRTPDTLSAVAATALANADAVVWAGVAPDAAARQANPRMIEVA LDDVLADARAVLARMLDSHPAPPTAAEQGRRIVAITSCPTGIAHTFMAAEALTQAASALGHPIHVETQGSVGAQNTLSAD AIAQADIVLIAADTQVDLSRFEGKRVFRSGTKAAIHDGQALIRRALAEAAIAAPSGQVQADAGANATPAEQQRTGPYKHL MTGVSFMLPFVVAGGILIALAFAVGGIYAADDAARGTLGWALFQIGAKSAFALMVPALAGYIAYSVANRPGIAPGMVGGM LAASLGAGFLGGIVAGFVAGYGTSALNRWLRLPRNLDGLKPVLILPVLGSLLTGLVMLYVVGAPVATLLASLTAWLRGMQ GANAVPLGALLGGMMAFDMGGPVNKAAYAFSTGLIGSQVYTPMAATMAAGMTPPLGIALAAWLFPSRFTGEERQAARATA VLGLAFISEGAIPYAARDPLRVIPALVTGSACAGALSMLFGVELRVPHGGAFVLPIPNAVTHLGGYVVALVAGTVLTAVL LALLKRRVAATA
Specific function: The phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. This
COG id: COG1299
COG function: function code G; Phosphotransferase system, fructose-specific IIC component
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PTS EIIC type-2 domain [H]
Homologues:
Organism=Escherichia coli, GI1788492, Length=457, Percent_Identity=53.1728665207877, Blast_Score=474, Evalue=1e-135, Organism=Escherichia coli, GI1786951, Length=476, Percent_Identity=38.0252100840336, Blast_Score=284, Evalue=1e-77, Organism=Escherichia coli, GI87082348, Length=488, Percent_Identity=35.655737704918, Blast_Score=245, Evalue=5e-66, Organism=Escherichia coli, GI1790386, Length=299, Percent_Identity=43.1438127090301, Blast_Score=228, Evalue=7e-61, Organism=Escherichia coli, GI1788729, Length=379, Percent_Identity=26.1213720316623, Blast_Score=105, Evalue=1e-23, Organism=Escherichia coli, GI1790387, Length=104, Percent_Identity=42.3076923076923, Blast_Score=82, Evalue=1e-16, Organism=Escherichia coli, GI1788730, Length=95, Percent_Identity=41.0526315789474, Blast_Score=75, Evalue=1e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013011 - InterPro: IPR003501 - InterPro: IPR003352 - InterPro: IPR013014 - InterPro: IPR003353 - InterPro: IPR006327 [H]
Pfam domain/function: PF02378 PTS_EIIC; PF02302 PTS_IIB [H]
EC number: =2.7.1.69 [H]
Molecular weight: Translated: 58137; Mature: 58006
Theoretical pI: Translated: 9.05; Mature: 9.05
Prosite motif: PS51099 PTS_EIIB_TYPE_2 ; PS51104 PTS_EIIC_TYPE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPHLLAILGADSHSTRPLLAGEALRHAAQQAGCRLDVDVRTPDTLSAVAATALANADAVV CCCEEEEEECCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHCCCCCEE WAGVAPDAAARQANPRMIEVALDDVLADARAVLARMLDSHPAPPTAAEQGRRIVAITSCP EECCCCCHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCEEEEEECCC TGIAHTFMAAEALTQAASALGHPIHVETQGSVGAQNTLSADAIAQADIVLIAADTQVDLS CHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCHHHHHHCCEEEEEECCCHHHH RFEGKRVFRSGTKAAIHDGQALIRRALAEAAIAAPSGQVQADAGANATPAEQQRTGPYKH HHCCHHHHHCCCHHHHHCCHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCHHHCCCHHHH LMTGVSFMLPFVVAGGILIALAFAVGGIYAADDAARGTLGWALFQIGAKSAFALMVPALA HHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCHHHHHHHHHCCHHHHHHHHHHHH GYIAYSVANRPGIAPGMVGGMLAASLGAGFLGGIVAGFVAGYGTSALNRWLRLPRNLDGL HHHHHHHCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCC KPVLILPVLGSLLTGLVMLYVVGAPVATLLASLTAWLRGMQGANAVPLGALLGGMMAFDM CHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCC GGPVNKAAYAFSTGLIGSQVYTPMAATMAAGMTPPLGIALAAWLFPSRFTGEERQAARAT CCCCCHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHH AVLGLAFISEGAIPYAARDPLRVIPALVTGSACAGALSMLFGVELRVPHGGAFVLPIPNA HHHHHHHHHCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHCCEEECCCCCEEEEECCHH VTHLGGYVVALVAGTVLTAVLLALLKRRVAATA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure PHLLAILGADSHSTRPLLAGEALRHAAQQAGCRLDVDVRTPDTLSAVAATALANADAVV CCEEEEEECCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHCCCCCEE WAGVAPDAAARQANPRMIEVALDDVLADARAVLARMLDSHPAPPTAAEQGRRIVAITSCP EECCCCCHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCEEEEEECCC TGIAHTFMAAEALTQAASALGHPIHVETQGSVGAQNTLSADAIAQADIVLIAADTQVDLS CHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCHHHHHHCCEEEEEECCCHHHH RFEGKRVFRSGTKAAIHDGQALIRRALAEAAIAAPSGQVQADAGANATPAEQQRTGPYKH HHCCHHHHHCCCHHHHHCCHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCHHHCCCHHHH LMTGVSFMLPFVVAGGILIALAFAVGGIYAADDAARGTLGWALFQIGAKSAFALMVPALA HHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCHHHHHHHHHCCHHHHHHHHHHHH GYIAYSVANRPGIAPGMVGGMLAASLGAGFLGGIVAGFVAGYGTSALNRWLRLPRNLDGL HHHHHHHCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCC KPVLILPVLGSLLTGLVMLYVVGAPVATLLASLTAWLRGMQGANAVPLGALLGGMMAFDM CHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCC GGPVNKAAYAFSTGLIGSQVYTPMAATMAAGMTPPLGIALAAWLFPSRFTGEERQAARAT CCCCCHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHH AVLGLAFISEGAIPYAARDPLRVIPALVTGSACAGALSMLFGVELRVPHGGAFVLPIPNA HHHHHHHHHCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHCCEEECCCCCEEEEECCHH VTHLGGYVVALVAGTVLTAVLLALLKRRVAATA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 1655739; 12024217; 1650911 [H]