| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
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The map label for this gene is ftsI [H]
Identifier: 17547569
GI number: 17547569
Start: 3067551
End: 3069338
Strand: Reverse
Name: ftsI [H]
Synonym: RSc2850
Alternate gene names: 17547569
Gene position: 3069338-3067551 (Counterclockwise)
Preceding gene: 17547570
Following gene: 17547568
Centisome position: 82.59
GC content: 68.01
Gene sequence:
>1788_bases ATGAGCGGCGCACACAAGCATCCGGGGACGGCGGCCCGCGCCCGCCTGGGCCAGTTCTCCGCCAGCCCGGTGCTGGGGCT GCGCTTGCCGATGTGGCGCTCCAAGCTGGTGGTCTTCCTGATGTTTGCCGCGTTCATGGCGCTGATCGTCCGTGCGGCGT GGATCCAGGGACCGGGCAACCGCTTCTACGAGGCCGAGGGCAAGAAGCGCTTCCAGCGCACGCTGGAACTGCCGGCCACG CGCGGCAAGATCCTCGACCGCAACGGCCTGGTGCTGGCCACCAGCCTGCCGGTCAAGGCCATCTGGGCCGTGCCCGAGGA CGTGCCCAACACCGTGCCCGGCGAAGACATGCAGAAGCTCGCCAAGCTGCTCGGCATGAGCAACAAGGATCTGGCGGGCA AACTCGGCGAGGACAAGGGCTTCGTCTACCTGAAGCGCCAGGTGCTGCCGGACATTGCCGACCAGATCGCCGGCCTGAAG ATCGACGGCATCTATCAGACGCGCGAATACAAGCGCTTCTACCCGGAAGGCGAAGCGATGGCGCACATCGTCGGCTTCAC CAACGTCGAGGACAAGGGCCAGGAAGGCATGGAGCTGGCGCGCGAGCCGGATCTCGCGGGCGCGTCCGGCCAGCGCCAGG TGATCAAGGATCGCCTGGGCCGCGTGGTGGAGGACGTCGGCGTGCTGAAGGCGCCGCGCGAGGGCCGCGACCTGACGCTC TCCATCGACGCCAAGATCCAGTACCTGACCTTCAACGAGCTCAAGGCGGCCGTGGAGCGCAACCGTGCCAAGGCCGGCAG CGCCATCGTGCTCGACGCCCAGACCGGCGAGGTGCTGGCGCTGGCCAACTATCCGACCTACAACCCGAACGACCGCTCGC GCCTGTCGGGCGAACAGCTGCGCAACCGCGTGCTGACCGACACCTTCGAGCCCGGCTCGATGATGAAGCCGATCAGCATC GGCCTCGCGCTGCAGTTGCACCGCGTGACGCCCAACACGCTGGTGCAGACCAACGGCAAGTTCACACTGGACGGCGCGAC CATCTCCGACACCAGCAACTACGGCACGCTGACCGTCGGCCAGGTCATCCAGCACTCGAGCAATATCGGCACGACCAAGA TCGCGCTGATGCTCAAGCCGCAGGAAATGTGGGACATGTTCACCAGCGTCGGCTTCGGCCAGGCGCCCAAGATCGGCTTC CCGGGCGCGGTGGCGGGGCGGCTGCGCCCGGCCAAGAACTGGCGGCGCATCGAGCAGGCGACCATGTCGTACGGCTACGG CCTGTCGGTGTCGCTGTTCCAGATGGCGCATGCCTACACGATCTTCGCGCACGACGGCGAACTGATCCCGGTCACGATGT ACCGCACCAACGGCCAGCCGCCGCAGGGGGAGCGCGTGCTGTCGCCCGAGGTGGCGCGGCAGGTGCGCCAGATGCTGGAA ACCGTGACATCGCCCGGCGGCACCGCGCCGCAGGCGCAGGTGATGGGCTACCGCGTGGGCGGCAAGACCGGCACGGCGTA CAAGCACGTCGGCCGCGGATATGACCGCTCCAAGTACCGTGCGTCGTTCATCGGCCTGGCGCCCATGTCGAACCCGCGCA TCATCGTCGCCGTCAGCGTCGACGAGCCTTCGGCCGGCAGCCACTACGGCGGCTCGGTGGCCGGGCCGGTGTTTGCCTCG ATCGCCGGCGGCAGCCTGCGCGCGCTGAACGTATCGCCGGATTCGCCGGTGCGCCAGCTCGTGATGACCGAAGGCGTGGC CGAAGAACCCGTGGGGGCGCTGCAATGA
Upstream 100 bases:
>100_bases CCGCGCAGGCGGGCCGCACGCAGTATCTGCAGGGGTTTGCCGACTTGCCGGCGGCGGCGTCCGCCGCGGCCAGCGCGCCC GCGGCTTCGGGAGTCCAGCC
Downstream 100 bases:
>100_bases CGGCCGTGCCGACCTCCGAACGAGCGCCGATCGCTGCGCGCCTGGCACCGGTGCTGGACTGGCTGCGCGCGCACGTGCCG GCCGGCGCCGATCTGACCAG
Product: penicillin-binding 3 precursor PBP-3 transmembrane protein
Products: NA
Alternate protein names: PBP-2 [H]
Number of amino acids: Translated: 595; Mature: 594
Protein sequence:
>595_residues MSGAHKHPGTAARARLGQFSASPVLGLRLPMWRSKLVVFLMFAAFMALIVRAAWIQGPGNRFYEAEGKKRFQRTLELPAT RGKILDRNGLVLATSLPVKAIWAVPEDVPNTVPGEDMQKLAKLLGMSNKDLAGKLGEDKGFVYLKRQVLPDIADQIAGLK IDGIYQTREYKRFYPEGEAMAHIVGFTNVEDKGQEGMELAREPDLAGASGQRQVIKDRLGRVVEDVGVLKAPREGRDLTL SIDAKIQYLTFNELKAAVERNRAKAGSAIVLDAQTGEVLALANYPTYNPNDRSRLSGEQLRNRVLTDTFEPGSMMKPISI GLALQLHRVTPNTLVQTNGKFTLDGATISDTSNYGTLTVGQVIQHSSNIGTTKIALMLKPQEMWDMFTSVGFGQAPKIGF PGAVAGRLRPAKNWRRIEQATMSYGYGLSVSLFQMAHAYTIFAHDGELIPVTMYRTNGQPPQGERVLSPEVARQVRQMLE TVTSPGGTAPQAQVMGYRVGGKTGTAYKHVGRGYDRSKYRASFIGLAPMSNPRIIVAVSVDEPSAGSHYGGSVAGPVFAS IAGGSLRALNVSPDSPVRQLVMTEGVAEEPVGALQ
Sequences:
>Translated_595_residues MSGAHKHPGTAARARLGQFSASPVLGLRLPMWRSKLVVFLMFAAFMALIVRAAWIQGPGNRFYEAEGKKRFQRTLELPAT RGKILDRNGLVLATSLPVKAIWAVPEDVPNTVPGEDMQKLAKLLGMSNKDLAGKLGEDKGFVYLKRQVLPDIADQIAGLK IDGIYQTREYKRFYPEGEAMAHIVGFTNVEDKGQEGMELAREPDLAGASGQRQVIKDRLGRVVEDVGVLKAPREGRDLTL SIDAKIQYLTFNELKAAVERNRAKAGSAIVLDAQTGEVLALANYPTYNPNDRSRLSGEQLRNRVLTDTFEPGSMMKPISI GLALQLHRVTPNTLVQTNGKFTLDGATISDTSNYGTLTVGQVIQHSSNIGTTKIALMLKPQEMWDMFTSVGFGQAPKIGF PGAVAGRLRPAKNWRRIEQATMSYGYGLSVSLFQMAHAYTIFAHDGELIPVTMYRTNGQPPQGERVLSPEVARQVRQMLE TVTSPGGTAPQAQVMGYRVGGKTGTAYKHVGRGYDRSKYRASFIGLAPMSNPRIIVAVSVDEPSAGSHYGGSVAGPVFAS IAGGSLRALNVSPDSPVRQLVMTEGVAEEPVGALQ >Mature_594_residues SGAHKHPGTAARARLGQFSASPVLGLRLPMWRSKLVVFLMFAAFMALIVRAAWIQGPGNRFYEAEGKKRFQRTLELPATR GKILDRNGLVLATSLPVKAIWAVPEDVPNTVPGEDMQKLAKLLGMSNKDLAGKLGEDKGFVYLKRQVLPDIADQIAGLKI DGIYQTREYKRFYPEGEAMAHIVGFTNVEDKGQEGMELAREPDLAGASGQRQVIKDRLGRVVEDVGVLKAPREGRDLTLS IDAKIQYLTFNELKAAVERNRAKAGSAIVLDAQTGEVLALANYPTYNPNDRSRLSGEQLRNRVLTDTFEPGSMMKPISIG LALQLHRVTPNTLVQTNGKFTLDGATISDTSNYGTLTVGQVIQHSSNIGTTKIALMLKPQEMWDMFTSVGFGQAPKIGFP GAVAGRLRPAKNWRRIEQATMSYGYGLSVSLFQMAHAYTIFAHDGELIPVTMYRTNGQPPQGERVLSPEVARQVRQMLET VTSPGGTAPQAQVMGYRVGGKTGTAYKHVGRGYDRSKYRASFIGLAPMSNPRIIVAVSVDEPSAGSHYGGSVAGPVFASI AGGSLRALNVSPDSPVRQLVMTEGVAEEPVGALQ
Specific function: Synthesis of cross-linked peptidoglycan from the lipid intermediates [H]
COG id: COG0768
COG function: function code M; Cell division protein FtsI/penicillin-binding protein 2
Gene ontology:
Cell location: Cell inner membrane; Peripheral membrane protein [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transpeptidase family [H]
Homologues:
Organism=Escherichia coli, GI1786272, Length=549, Percent_Identity=40.6193078324226, Blast_Score=402, Evalue=1e-113, Organism=Escherichia coli, GI1786854, Length=569, Percent_Identity=23.3743409490334, Blast_Score=98, Evalue=2e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012338 - InterPro: IPR005311 - InterPro: IPR001460 [H]
Pfam domain/function: PF03717 PBP_dimer; PF00905 Transpeptidase [H]
EC number: NA
Molecular weight: Translated: 64535; Mature: 64404
Theoretical pI: Translated: 10.15; Mature: 10.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGAHKHPGTAARARLGQFSASPVLGLRLPMWRSKLVVFLMFAAFMALIVRAAWIQGPGN CCCCCCCCCHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC RFYEAEGKKRFQRTLELPATRGKILDRNGLVLATSLPVKAIWAVPEDVPNTVPGEDMQKL CEEECHHHHHHHHHHCCCCCCCCEECCCCEEEEECCCEEEEEECCCCCCCCCCCHHHHHH AKLLGMSNKDLAGKLGEDKGFVYLKRQVLPDIADQIAGLKIDGIYQTREYKRFYPEGEAM HHHHCCCCCCHHCCCCCCCCEEEEHHHHHHHHHHHHCCEEEECEECCCHHHHHCCCCCCE AHIVGFTNVEDKGQEGMELAREPDLAGASGQRQVIKDRLGRVVEDVGVLKAPREGRDLTL EEEEEECCCCCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEE SIDAKIQYLTFNELKAAVERNRAKAGSAIVLDAQTGEVLALANYPTYNPNDRSRLSGEQL EEECEEEEEEHHHHHHHHHHHHHCCCCEEEEECCCCCEEEEECCCCCCCCCHHHCCHHHH RNRVLTDTFEPGSMMKPISIGLALQLHRVTPNTLVQTNGKFTLDGATISDTSNYGTLTVG HHHHHCCCCCCCCCCCCEEEEEEEEEEECCCCCEEECCCEEEECCCEECCCCCCCEEEHH QVIQHSSNIGTTKIALMLKPQEMWDMFTSVGFGQAPKIGFPGAVAGRLRPAKNWRRIEQA HHHHHCCCCCCEEEEEEECCHHHHHHHHHCCCCCCCCCCCCCCHHCCCCCHHHHHHHHHH TMSYGYGLSVSLFQMAHAYTIFAHDGELIPVTMYRTNGQPPQGERVLSPEVARQVRQMLE HHHCCCCCHHHHHHHHHEEEEEEECCCEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHH TVTSPGGTAPQAQVMGYRVGGKTGTAYKHVGRGYDRSKYRASFIGLAPMSNPRIIVAVSV HHCCCCCCCCCCEEEEEEECCCCCCHHHHHCCCCCCCHHEEEEEEECCCCCCEEEEEEEE DEPSAGSHYGGSVAGPVFASIAGGSLRALNVSPDSPVRQLVMTEGVAEEPVGALQ CCCCCCCCCCCCCCHHHHHHHCCCCEEEEECCCCHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure SGAHKHPGTAARARLGQFSASPVLGLRLPMWRSKLVVFLMFAAFMALIVRAAWIQGPGN CCCCCCCCHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC RFYEAEGKKRFQRTLELPATRGKILDRNGLVLATSLPVKAIWAVPEDVPNTVPGEDMQKL CEEECHHHHHHHHHHCCCCCCCCEECCCCEEEEECCCEEEEEECCCCCCCCCCCHHHHHH AKLLGMSNKDLAGKLGEDKGFVYLKRQVLPDIADQIAGLKIDGIYQTREYKRFYPEGEAM HHHHCCCCCCHHCCCCCCCCEEEEHHHHHHHHHHHHCCEEEECEECCCHHHHHCCCCCCE AHIVGFTNVEDKGQEGMELAREPDLAGASGQRQVIKDRLGRVVEDVGVLKAPREGRDLTL EEEEEECCCCCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEE SIDAKIQYLTFNELKAAVERNRAKAGSAIVLDAQTGEVLALANYPTYNPNDRSRLSGEQL EEECEEEEEEHHHHHHHHHHHHHCCCCEEEEECCCCCEEEEECCCCCCCCCHHHCCHHHH RNRVLTDTFEPGSMMKPISIGLALQLHRVTPNTLVQTNGKFTLDGATISDTSNYGTLTVG HHHHHCCCCCCCCCCCCEEEEEEEEEEECCCCCEEECCCEEEECCCEECCCCCCCEEEHH QVIQHSSNIGTTKIALMLKPQEMWDMFTSVGFGQAPKIGFPGAVAGRLRPAKNWRRIEQA HHHHHCCCCCCEEEEEEECCHHHHHHHHHCCCCCCCCCCCCCCHHCCCCCHHHHHHHHHH TMSYGYGLSVSLFQMAHAYTIFAHDGELIPVTMYRTNGQPPQGERVLSPEVARQVRQMLE HHHCCCCCHHHHHHHHHEEEEEEECCCEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHH TVTSPGGTAPQAQVMGYRVGGKTGTAYKHVGRGYDRSKYRASFIGLAPMSNPRIIVAVSV HHCCCCCCCCCCEEEEEEECCCCCCHHHHHCCCCCCCHHEEEEEEECCCCCCEEEEEEEE DEPSAGSHYGGSVAGPVFASIAGGSLRALNVSPDSPVRQLVMTEGVAEEPVGALQ CCCCCCCCCCCCCCHHHHHHHCCCCEEEEECCCCHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 3126399 [H]