Click here to switch to the map view.

The map label for this gene is 17547551

Identifier: 17547551

GI number: 17547551

Start: 3044602

End: 3045486

Strand: Reverse

Name: 17547551

Synonym: RSc2832

Alternate gene names: NA

Gene position: 3045486-3044602 (Counterclockwise)

Preceding gene: 17547552

Following gene: 17547550

Centisome position: 81.95

GC content: 66.21

Gene sequence:

>885_bases
ATGTCTTCCGATCTCACCGTCCGGCTCGAGCGCTTCCTGGGCCGCCTCGAGCAATGGCTGCCGCCCGAGCTGACCGAGGC
CGACTGGAAGGCGGCGGTCGCTTTCCGCTGGCGCAAGCGCCACAGCCTGTTCGGCACCATCGGCTACCTCGCGCCGATTC
GTCAGCTACCGCCGATCCACCTGAGTGACCTGCACAACATCGACCGCCAGAAAGACGCGATCGTCGCCAATACGCGCCAG
TTCGTGCGCGGGCTGCCGGCCAACAATGTGCTGCTGACCGGCGCGCGCGGCACCGGCAAGTCGTCGCTGATCAAGGCGTG
CCTGAATGCATTCGTCGGCGAAGGGCTGCGGCTGGTGGAGGTCGACAAGGATGACCTGTCCGATCTCGGCGACATCGTGG
AGCAGCTCACGGCACGCCCCGAGCGCTTCGCCATCTTCTGCGATGACCTGTCGTTCGAGGAGGGCGAATCGGGCTACAAG
GCGCTGAAATCCGCGCTGGACGGCTCGGTGGCGGCGCAGTCGGACAACGTGCTGATCTACGCCACGTCCAACCGGCGCCA
CCTGCTGCCGGAATACATGAAGGACAACGAGACCTACCAGCACATGCCGGACGGTGAGATCCATCCGGGCGAAGTGGTGG
AGGAGAAGATCTCGCTGTCGGAGCGTTTCGGGCTGTGGCTGTCGTTCTACCCGCCCAAGCAGGATGAGTACCTGACCATC
GTCGCCCATTGGCTCAAGCACTTCGGCTGCAGCGGCGAGGACATCGCCGCCGCCCGGGGCGATGCGCTGGTATGGGCGCT
GGAGCGCGGTTCCCGCTCGGGCCGGGTGGCCTGGCAGTTCGCGCGTGACTGGGGGGGCAAGCATGGGCGGCAGCATGTCG
GCTGA

Upstream 100 bases:

>100_bases
CGGCCGCGGCGACGCGACCGCCACGGTGTGGACGTGCGACTTCTCGCACGACTACGTCTCGATCAACGCGGATTACCGCT
CGTAAGCGACGACCGCCGCC

Downstream 100 bases:

>100_bases
CACGATCACGCAAGCATCGGCCACACACACGCCGGACGGCCGCAAGATCACCGAAGTGGCCGTCGGCGTGCTGGTGCAGC
CGGATGGCCGCTTCCTGCTG

Product: hypothetical protein

Products: NA

Alternate protein names: ATP-Dependent Protease Subunit; AAA ATPase Family Protein; AAA Family ATPase; ABC Transporter ATPase; ATPase Family Protein; ATPase Of AAA+ Class; Intermediate Filament Protein; AAA+ Superfamily ATPase; AAA ATPase Superfamily

Number of amino acids: Translated: 294; Mature: 293

Protein sequence:

>294_residues
MSSDLTVRLERFLGRLEQWLPPELTEADWKAAVAFRWRKRHSLFGTIGYLAPIRQLPPIHLSDLHNIDRQKDAIVANTRQ
FVRGLPANNVLLTGARGTGKSSLIKACLNAFVGEGLRLVEVDKDDLSDLGDIVEQLTARPERFAIFCDDLSFEEGESGYK
ALKSALDGSVAAQSDNVLIYATSNRRHLLPEYMKDNETYQHMPDGEIHPGEVVEEKISLSERFGLWLSFYPPKQDEYLTI
VAHWLKHFGCSGEDIAAARGDALVWALERGSRSGRVAWQFARDWGGKHGRQHVG

Sequences:

>Translated_294_residues
MSSDLTVRLERFLGRLEQWLPPELTEADWKAAVAFRWRKRHSLFGTIGYLAPIRQLPPIHLSDLHNIDRQKDAIVANTRQ
FVRGLPANNVLLTGARGTGKSSLIKACLNAFVGEGLRLVEVDKDDLSDLGDIVEQLTARPERFAIFCDDLSFEEGESGYK
ALKSALDGSVAAQSDNVLIYATSNRRHLLPEYMKDNETYQHMPDGEIHPGEVVEEKISLSERFGLWLSFYPPKQDEYLTI
VAHWLKHFGCSGEDIAAARGDALVWALERGSRSGRVAWQFARDWGGKHGRQHVG
>Mature_293_residues
SSDLTVRLERFLGRLEQWLPPELTEADWKAAVAFRWRKRHSLFGTIGYLAPIRQLPPIHLSDLHNIDRQKDAIVANTRQF
VRGLPANNVLLTGARGTGKSSLIKACLNAFVGEGLRLVEVDKDDLSDLGDIVEQLTARPERFAIFCDDLSFEEGESGYKA
LKSALDGSVAAQSDNVLIYATSNRRHLLPEYMKDNETYQHMPDGEIHPGEVVEEKISLSERFGLWLSFYPPKQDEYLTIV
AHWLKHFGCSGEDIAAARGDALVWALERGSRSGRVAWQFARDWGGKHGRQHVG

Specific function: Unknown

COG id: COG2607

COG function: function code R; Predicted ATPase (AAA+ superfamily)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33066; Mature: 32935

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSDLTVRLERFLGRLEQWLPPELTEADWKAAVAFRWRKRHSLFGTIGYLAPIRQLPPIH
CCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
LSDLHNIDRQKDAIVANTRQFVRGLPANNVLLTGARGTGKSSLIKACLNAFVGEGLRLVE
HHHHHCCCHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHHHHHHCCEEEEE
VDKDDLSDLGDIVEQLTARPERFAIFCDDLSFEEGESGYKALKSALDGSVAAQSDNVLIY
ECHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHCCCCEECCCCEEEE
ATSNRRHLLPEYMKDNETYQHMPDGEIHPGEVVEEKISLSERFGLWLSFYPPKQDEYLTI
EECCCCCCCHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCEEEECCCCCCCHHHH
VAHWLKHFGCSGEDIAAARGDALVWALERGSRSGRVAWQFARDWGGKHGRQHVG
HHHHHHHHCCCCCCHHHCCCCEEEEEEECCCCCCCEEEEEHHHCCCCCCCCCCC
>Mature Secondary Structure 
SSDLTVRLERFLGRLEQWLPPELTEADWKAAVAFRWRKRHSLFGTIGYLAPIRQLPPIH
CCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
LSDLHNIDRQKDAIVANTRQFVRGLPANNVLLTGARGTGKSSLIKACLNAFVGEGLRLVE
HHHHHCCCHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHHHHHHCCEEEEE
VDKDDLSDLGDIVEQLTARPERFAIFCDDLSFEEGESGYKALKSALDGSVAAQSDNVLIY
ECHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHCCCCEECCCCEEEE
ATSNRRHLLPEYMKDNETYQHMPDGEIHPGEVVEEKISLSERFGLWLSFYPPKQDEYLTI
EECCCCCCCHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCEEEECCCCCCCHHHH
VAHWLKHFGCSGEDIAAARGDALVWALERGSRSGRVAWQFARDWGGKHGRQHVG
HHHHHHHHCCCCCCHHHCCCCEEEEEEECCCCCCCEEEEEHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA