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The map label for this gene is 17547533

Identifier: 17547533

GI number: 17547533

Start: 3027369

End: 3028238

Strand: Reverse

Name: 17547533

Synonym: RSc2814

Alternate gene names: NA

Gene position: 3028238-3027369 (Counterclockwise)

Preceding gene: 17547534

Following gene: 17547532

Centisome position: 81.48

GC content: 69.31

Gene sequence:

>870_bases
ATGTCCACGACCGAACCGTACGCGACCATGTCCGATGCGCTGCACGATTGGCTGCAGCGTCACGTGGACGAAGGCTTCGA
GGCCGACCCGCTGGTGGCTTCGATGGTGCAGTCCGGCTATGACCGCGCTTTCGCGCGGCGCGTGGTGGACGAAGCGCTTG
CGCAGCGGCCGAAGCCGGAGCCCGCCGCCACGGTGCCGAGTCCGGCGCCGGCCGGGCCTGAGCCGGAAAGCAGCAACGCG
GTGCGCACGTCCGACCGCGAGATTCCCATCCTCTTTGCCATCGAGACGCCGCGCATTGTGCTGTTCCAGCATTTCCTGTC
GGACGAGGAGTGCGACCAGTTGATCGCGCTCGGGCGGCACCGGCTGAAGCGCTCGCCGGTGGTGAATCCGGAGACTGGCG
AAGAGAACCTGATCTCGGCCCGCACCAGCCAGGGCGCGATGTTCCAGGTGGGCGAGCATCCGCTGGTCGCCCGGATCGAG
GCGCGCATCGCGCAGGCTACCGGCGTGCCGGTCGAGCACGGCGAGGGCTTCCAGGTGCTCCATTACCAGCCCGGCGGTGA
ATACCAGCCGCATTTCGACTACTTCAACCCGGGCCGCAGCGGCGAGGCGCGCCAGCTGGAGGTGGGCGGCCAGCGCGTCG
CCACGCTCGTCATCTACCTGAACAGCGTGCCGGCCGGCGGCGCGACCGGCTTCCCCAAGCTGGGCCTGGAGGTGGCGCCG
GTCAAGGGCAACGCCGTCTTCTTCGTCTACAAGCGGCCCGATGGCACGCTCGACGACAATACGCTGCACGCCGGCCTGCC
GGTCGAGCGCGGCGAGAAGTGGATCGCCACCAAGTGGCTGCGCGAGCGGCCTTATCGGCGCGGCGCCTGA

Upstream 100 bases:

>100_bases
CCGTTCTCGCCGCTGCGCATCGCCGGCGGTTCCTGACGGCGGCTGCGGCGGGGATCGACCTACAATAGGGCCATCCGTCC
GCCCTTCGCCTGCTTTCGCA

Downstream 100 bases:

>100_bases
GCGCGCCGTCCACCCGCTTGCCAGGTGCGCATGGAATACACGTTCGCGTCCGCTACCGTCCTGCTGCTGCTGATCACCGA
TCCGCTCGGCAACATCCCCA

Product: hypothetical protein

Products: NA

Alternate protein names: 2OG-Fe(II) Oxygenase; Prolyl 4-Hydroxylase Alpha Subunit; Oxidoreductase 2OG-Fe(II) Oxygenase Family; Oxygenase; Procollagen-Proline 2-Oxoglutarate-4-Dioxygenase; Response Regulator Receiver Domain-Containing Protein; 2OG-Fe(II) Oxygenase Family Oxidoreductase; Prolyl 4-Hydroxylase Subunit Alpha; 2OG-Fe(II) Oxygenase Superfamily Protein; 2OG-Fe(II) Oxygenase Family Protein; Procollagen-Proline 2-Oxoglutarate-4- Dioxygenase; Prolyl 4-Hydroxylase

Number of amino acids: Translated: 289; Mature: 288

Protein sequence:

>289_residues
MSTTEPYATMSDALHDWLQRHVDEGFEADPLVASMVQSGYDRAFARRVVDEALAQRPKPEPAATVPSPAPAGPEPESSNA
VRTSDREIPILFAIETPRIVLFQHFLSDEECDQLIALGRHRLKRSPVVNPETGEENLISARTSQGAMFQVGEHPLVARIE
ARIAQATGVPVEHGEGFQVLHYQPGGEYQPHFDYFNPGRSGEARQLEVGGQRVATLVIYLNSVPAGGATGFPKLGLEVAP
VKGNAVFFVYKRPDGTLDDNTLHAGLPVERGEKWIATKWLRERPYRRGA

Sequences:

>Translated_289_residues
MSTTEPYATMSDALHDWLQRHVDEGFEADPLVASMVQSGYDRAFARRVVDEALAQRPKPEPAATVPSPAPAGPEPESSNA
VRTSDREIPILFAIETPRIVLFQHFLSDEECDQLIALGRHRLKRSPVVNPETGEENLISARTSQGAMFQVGEHPLVARIE
ARIAQATGVPVEHGEGFQVLHYQPGGEYQPHFDYFNPGRSGEARQLEVGGQRVATLVIYLNSVPAGGATGFPKLGLEVAP
VKGNAVFFVYKRPDGTLDDNTLHAGLPVERGEKWIATKWLRERPYRRGA
>Mature_288_residues
STTEPYATMSDALHDWLQRHVDEGFEADPLVASMVQSGYDRAFARRVVDEALAQRPKPEPAATVPSPAPAGPEPESSNAV
RTSDREIPILFAIETPRIVLFQHFLSDEECDQLIALGRHRLKRSPVVNPETGEENLISARTSQGAMFQVGEHPLVARIEA
RIAQATGVPVEHGEGFQVLHYQPGGEYQPHFDYFNPGRSGEARQLEVGGQRVATLVIYLNSVPAGGATGFPKLGLEVAPV
KGNAVFFVYKRPDGTLDDNTLHAGLPVERGEKWIATKWLRERPYRRGA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI217272849, Length=195, Percent_Identity=40, Blast_Score=145, Evalue=3e-35,
Organism=Homo sapiens, GI63252888, Length=195, Percent_Identity=40, Blast_Score=145, Evalue=3e-35,
Organism=Homo sapiens, GI63252886, Length=195, Percent_Identity=40.5128205128205, Blast_Score=144, Evalue=7e-35,
Organism=Homo sapiens, GI63252893, Length=190, Percent_Identity=38.9473684210526, Blast_Score=137, Evalue=1e-32,
Organism=Homo sapiens, GI63252891, Length=190, Percent_Identity=38.9473684210526, Blast_Score=137, Evalue=1e-32,
Organism=Homo sapiens, GI217272861, Length=190, Percent_Identity=38.9473684210526, Blast_Score=137, Evalue=1e-32,
Organism=Homo sapiens, GI4758868, Length=189, Percent_Identity=38.0952380952381, Blast_Score=137, Evalue=2e-32,
Organism=Homo sapiens, GI217272863, Length=189, Percent_Identity=38.0952380952381, Blast_Score=137, Evalue=2e-32,
Organism=Homo sapiens, GI33589818, Length=196, Percent_Identity=39.2857142857143, Blast_Score=120, Evalue=1e-27,
Organism=Homo sapiens, GI217272851, Length=196, Percent_Identity=37.2448979591837, Blast_Score=114, Evalue=7e-26,
Organism=Caenorhabditis elegans, GI17541712, Length=219, Percent_Identity=34.2465753424658, Blast_Score=120, Evalue=6e-28,
Organism=Caenorhabditis elegans, GI17552840, Length=192, Percent_Identity=32.8125, Blast_Score=108, Evalue=3e-24,
Organism=Caenorhabditis elegans, GI193209070, Length=151, Percent_Identity=31.1258278145695, Blast_Score=86, Evalue=3e-17,
Organism=Caenorhabditis elegans, GI193209068, Length=145, Percent_Identity=32.4137931034483, Blast_Score=85, Evalue=5e-17,
Organism=Caenorhabditis elegans, GI72000637, Length=115, Percent_Identity=33.0434782608696, Blast_Score=70, Evalue=2e-12,
Organism=Drosophila melanogaster, GI24651477, Length=187, Percent_Identity=37.4331550802139, Blast_Score=139, Evalue=2e-33,
Organism=Drosophila melanogaster, GI24651407, Length=195, Percent_Identity=35.8974358974359, Blast_Score=125, Evalue=4e-29,
Organism=Drosophila melanogaster, GI281362877, Length=192, Percent_Identity=34.8958333333333, Blast_Score=117, Evalue=8e-27,
Organism=Drosophila melanogaster, GI221460681, Length=191, Percent_Identity=35.6020942408377, Blast_Score=116, Evalue=2e-26,
Organism=Drosophila melanogaster, GI24651418, Length=188, Percent_Identity=35.6382978723404, Blast_Score=114, Evalue=1e-25,
Organism=Drosophila melanogaster, GI116008432, Length=193, Percent_Identity=35.2331606217617, Blast_Score=113, Evalue=2e-25,
Organism=Drosophila melanogaster, GI116008128, Length=193, Percent_Identity=35.2331606217617, Blast_Score=112, Evalue=2e-25,
Organism=Drosophila melanogaster, GI24651424, Length=194, Percent_Identity=33.5051546391753, Blast_Score=109, Evalue=2e-24,
Organism=Drosophila melanogaster, GI116008537, Length=193, Percent_Identity=31.6062176165803, Blast_Score=107, Evalue=8e-24,
Organism=Drosophila melanogaster, GI116008130, Length=193, Percent_Identity=31.6062176165803, Blast_Score=107, Evalue=9e-24,
Organism=Drosophila melanogaster, GI24651420, Length=187, Percent_Identity=35.8288770053476, Blast_Score=105, Evalue=3e-23,
Organism=Drosophila melanogaster, GI116008434, Length=191, Percent_Identity=30.8900523560209, Blast_Score=101, Evalue=6e-22,
Organism=Drosophila melanogaster, GI21358233, Length=187, Percent_Identity=31.5508021390374, Blast_Score=99, Evalue=3e-21,
Organism=Drosophila melanogaster, GI281361323, Length=188, Percent_Identity=29.2553191489362, Blast_Score=98, Evalue=6e-21,
Organism=Drosophila melanogaster, GI24651430, Length=188, Percent_Identity=29.2553191489362, Blast_Score=98, Evalue=6e-21,
Organism=Drosophila melanogaster, GI78706702, Length=189, Percent_Identity=31.7460317460317, Blast_Score=97, Evalue=1e-20,
Organism=Drosophila melanogaster, GI221512818, Length=123, Percent_Identity=37.3983739837398, Blast_Score=92, Evalue=3e-19,
Organism=Drosophila melanogaster, GI45550650, Length=179, Percent_Identity=28.4916201117318, Blast_Score=87, Evalue=2e-17,
Organism=Drosophila melanogaster, GI24666354, Length=143, Percent_Identity=32.1678321678322, Blast_Score=83, Evalue=2e-16,
Organism=Drosophila melanogaster, GI221512810, Length=190, Percent_Identity=30.5263157894737, Blast_Score=77, Evalue=2e-14,
Organism=Drosophila melanogaster, GI24651416, Length=187, Percent_Identity=31.0160427807487, Blast_Score=73, Evalue=2e-13,
Organism=Drosophila melanogaster, GI21358309, Length=150, Percent_Identity=34, Blast_Score=72, Evalue=3e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31810; Mature: 31679

Theoretical pI: Translated: 5.84; Mature: 5.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTTEPYATMSDALHDWLQRHVDEGFEADPLVASMVQSGYDRAFARRVVDEALAQRPKPE
CCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PAATVPSPAPAGPEPESSNAVRTSDREIPILFAIETPRIVLFQHFLSDEECDQLIALGRH
CCCCCCCCCCCCCCCCCCCCEECCCCCCEEEEEECCCHHHHHHHHHCHHHHHHHHHHHHH
RLKRSPVVNPETGEENLISARTSQGAMFQVGEHPLVARIEARIAQATGVPVEHGEGFQVL
HHHCCCCCCCCCCCCHHHHHCCCCCCEEEECCCCHHHHHHHHHHHHCCCCCCCCCCEEEE
HYQPGGEYQPHFDYFNPGRSGEARQLEVGGQRVATLVIYLNSVPAGGATGFPKLGLEVAP
EECCCCCCCCCCCCCCCCCCCCCEEEECCCCEEEEEEEEEECCCCCCCCCCCCCCCEEEE
VKGNAVFFVYKRPDGTLDDNTLHAGLPVERGEKWIATKWLRERPYRRGA
ECCCEEEEEEECCCCCCCCCEEECCCCHHHCCHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
STTEPYATMSDALHDWLQRHVDEGFEADPLVASMVQSGYDRAFARRVVDEALAQRPKPE
CCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PAATVPSPAPAGPEPESSNAVRTSDREIPILFAIETPRIVLFQHFLSDEECDQLIALGRH
CCCCCCCCCCCCCCCCCCCCEECCCCCCEEEEEECCCHHHHHHHHHCHHHHHHHHHHHHH
RLKRSPVVNPETGEENLISARTSQGAMFQVGEHPLVARIEARIAQATGVPVEHGEGFQVL
HHHCCCCCCCCCCCCHHHHHCCCCCCEEEECCCCHHHHHHHHHHHHCCCCCCCCCCEEEE
HYQPGGEYQPHFDYFNPGRSGEARQLEVGGQRVATLVIYLNSVPAGGATGFPKLGLEVAP
EECCCCCCCCCCCCCCCCCCCCCEEEECCCCEEEEEEEEEECCCCCCCCCCCCCCCEEEE
VKGNAVFFVYKRPDGTLDDNTLHAGLPVERGEKWIATKWLRERPYRRGA
ECCCEEEEEEECCCCCCCCCEEECCCCHHHCCHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA