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The map label for this gene is rhtA [H]

Identifier: 17547521

GI number: 17547521

Start: 3012073

End: 3012909

Strand: Direct

Name: rhtA [H]

Synonym: RSc2802

Alternate gene names: 17547521

Gene position: 3012073-3012909 (Clockwise)

Preceding gene: 17547519

Following gene: 17547530

Centisome position: 81.05

GC content: 71.45

Gene sequence:

>837_bases
ATGCTGGCGCTGCTCGGCTCCATGGCCTCCGTCTGCGTCGGCAATTCCTTCGCCAAGACCCTGTTTCCTGCACTGGGCGC
GGCCGGCACGGTGACGTACCGGATCACCATCGGCGCGGCGATCCTGCTGGCCCTGTGGCGGCCGTGGCGATTGCGCCTGC
ACCGCCGCGATGCGGGCAGGATCGCGCTGTACGGCGTCACGCTGGCCAGCATGAACCTGCTGTTCTACCTGTCGCTCACG
CGGCTGCCGATCGGGATCGCCATCGCCATCGAGTTCACCGGACCGCTGGTGCTGGCGGTGGCGCTGTCGCGGCGCGCGCT
GGATTTCGTGTGGATCGGGCTGGCGGTGGCCGGGCTGCTGATCCTGACCGTGGGCGGCCGGGCGGTCGGACAGATCGATC
CGCTCGGCGCGGCCTATGCGCTGGGGGCCGGCGTGTGCTGGGCGCTTTATATCGTGACCGGCAAGCGCGTCGGTACGCTG
CCGGCGGGTCAGGCCACATCGCTGGGCATGGCGGTGGGCGCACTGTTTGCGATTCCGTTCGGGGTGGTGCAGGCGGGGCC
GGCGCTGCTGGCGCCGTCGCTGATCGTTGCCGGCCTGGGGCTGGGCGTGCTGTCGAGCGCCGTGCCCTACTCGCTGGAGA
TGGTGGCGCTCAGGCACCTGTCGGGCCGCACCTTCAGCGTGCTGCTGAGCCTGGAGCCGGCCATCGGCGCGCTGGCCGGC
GCGGTGGTGCTGCATGAGCATCTGTCGGCGCGGCAGTGGGTGGCGATTGTCGCCATCATCGCGGCATCGGCCGGCTGCGC
GGCGACGGCACGGTCACGCCGGGCAGCCGAGGCCTGA

Upstream 100 bases:

>100_bases
GGCTATGCTGGGGCATCCCCCGCCTGCGGCCACACGCATGAACTCGCCTTCCACTGTCGCCCCGACGTCTTCGGCCGGCC
GCCCTTCGCTCTGGATGCCG

Downstream 100 bases:

>100_bases
CACCGCGCGCCCCGCCGAACGCGCTGCTAGCCGGAGAAGCGCGCCGCCGCCTGCAGCACCGCAACCCGCGCCTGCGCGTA
GACCATGCCCTTCCAGGCCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 278; Mature: 278

Protein sequence:

>278_residues
MLALLGSMASVCVGNSFAKTLFPALGAAGTVTYRITIGAAILLALWRPWRLRLHRRDAGRIALYGVTLASMNLLFYLSLT
RLPIGIAIAIEFTGPLVLAVALSRRALDFVWIGLAVAGLLILTVGGRAVGQIDPLGAAYALGAGVCWALYIVTGKRVGTL
PAGQATSLGMAVGALFAIPFGVVQAGPALLAPSLIVAGLGLGVLSSAVPYSLEMVALRHLSGRTFSVLLSLEPAIGALAG
AVVLHEHLSARQWVAIVAIIAASAGCAATARSRRAAEA

Sequences:

>Translated_278_residues
MLALLGSMASVCVGNSFAKTLFPALGAAGTVTYRITIGAAILLALWRPWRLRLHRRDAGRIALYGVTLASMNLLFYLSLT
RLPIGIAIAIEFTGPLVLAVALSRRALDFVWIGLAVAGLLILTVGGRAVGQIDPLGAAYALGAGVCWALYIVTGKRVGTL
PAGQATSLGMAVGALFAIPFGVVQAGPALLAPSLIVAGLGLGVLSSAVPYSLEMVALRHLSGRTFSVLLSLEPAIGALAG
AVVLHEHLSARQWVAIVAIIAASAGCAATARSRRAAEA
>Mature_278_residues
MLALLGSMASVCVGNSFAKTLFPALGAAGTVTYRITIGAAILLALWRPWRLRLHRRDAGRIALYGVTLASMNLLFYLSLT
RLPIGIAIAIEFTGPLVLAVALSRRALDFVWIGLAVAGLLILTVGGRAVGQIDPLGAAYALGAGVCWALYIVTGKRVGTL
PAGQATSLGMAVGALFAIPFGVVQAGPALLAPSLIVAGLGLGVLSSAVPYSLEMVALRHLSGRTFSVLLSLEPAIGALAG
AVVLHEHLSARQWVAIVAIIAASAGCAATARSRRAAEA

Specific function: Unknown

COG id: COG5006

COG function: function code R; Predicted permease, DMT superfamily

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 DUF6 domains [H]

Homologues:

Organism=Escherichia coli, GI1787033, Length=270, Percent_Identity=47.7777777777778, Blast_Score=232, Evalue=2e-62,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000620 [H]

Pfam domain/function: PF00892 DUF6 [H]

EC number: NA

Molecular weight: Translated: 28467; Mature: 28467

Theoretical pI: Translated: 11.24; Mature: 11.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLALLGSMASVCVGNSFAKTLFPALGAAGTVTYRITIGAAILLALWRPWRLRLHRRDAGR
CCCHHHHHHHHHHCCHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHCCCHHEEEEECCCCC
IALYGVTLASMNLLFYLSLTRLPIGIAIAIEFTGPLVLAVALSRRALDFVWIGLAVAGLL
EEEEEHHHHHHHHHHHHHHHHCCEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHH
ILTVGGRAVGQIDPLGAAYALGAGVCWALYIVTGKRVGTLPAGQATSLGMAVGALFAIPF
HHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEECCCCCCCHHHHHHHHHHHHHHHH
GVVQAGPALLAPSLIVAGLGLGVLSSAVPYSLEMVALRHLSGRTFSVLLSLEPAIGALAG
HHHHCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCEEEEEEEECHHHHHHHH
AVVLHEHLSARQWVAIVAIIAASAGCAATARSRRAAEA
HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCC
>Mature Secondary Structure
MLALLGSMASVCVGNSFAKTLFPALGAAGTVTYRITIGAAILLALWRPWRLRLHRRDAGR
CCCHHHHHHHHHHCCHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHCCCHHEEEEECCCCC
IALYGVTLASMNLLFYLSLTRLPIGIAIAIEFTGPLVLAVALSRRALDFVWIGLAVAGLL
EEEEEHHHHHHHHHHHHHHHHCCEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHH
ILTVGGRAVGQIDPLGAAYALGAGVCWALYIVTGKRVGTLPAGQATSLGMAVGALFAIPF
HHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEECCCCCCCHHHHHHHHHHHHHHHH
GVVQAGPALLAPSLIVAGLGLGVLSSAVPYSLEMVALRHLSGRTFSVLLSLEPAIGALAG
HHHHCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCEEEEEEEECHHHHHHHH
AVVLHEHLSARQWVAIVAIIAASAGCAATARSRRAAEA
HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]