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The map label for this gene is dgoK [C]

Identifier: 17547478

GI number: 17547478

Start: 2971015

End: 2972010

Strand: Reverse

Name: dgoK [C]

Synonym: RSc2759

Alternate gene names: 17547478

Gene position: 2972010-2971015 (Counterclockwise)

Preceding gene: 17547479

Following gene: 17547477

Centisome position: 79.97

GC content: 68.57

Gene sequence:

>996_bases
ATGAACATTCTCACCATCGATACGGGTACCACCAACACGCGCGTCACGCTCTGGCGCGACGATGTGGCGCTGTGCCAGGC
CGCGCGGCAGGTCGGCGTGCGCGATACCGCCATCACCGGCAACCGGACGACGCTGCAGCGCGGCGTGCAGGACACCATCG
AGGCCGCGCTGCAGAAGGCCGGCCTTGGGATCGGCCAGGTCGACCTGGTGCTGGCCTCCGGCATGATCACGTCCAACGTC
GGCCTGTGCGAGGTGCCGCACCTGCCGGCGCCGGCTGGCCTGCGCGACCTGGCCGCGGGCATGGTGCAGGCCGGCATTCC
CGAGGTGAGCGCCAAGCCGATCTGGTTCGTGCCGGGCGTGCGCAATCCGGTGGAGAACCTCGGACTGCACAACATCGAAT
CGATGGACATGATGCGCGGCGAGGAGGTCGAGACCATGGGTCTGGTCGCGCGGCTGTCCATCACCGAGCCTGCGGTGATC
GTGCTGCCCGGCTCGCACTCGAAGTTCGTGCACCTGGATGCCGAGCAGCGCATCACCGGCTGCGTGACGACGCTCGCCGG
CGAGCTGCTGCATGTGATCACGCACAACACCATCCTGGCCGACTCGCTCGATTCCGACTTCGCCGGCGAGGTCGATCCGG
AGATGCTGCTGGCCGGCGCCCGCAGCGCCGGCAGCATCGGCCTGGGGCGTGCCTGCTTCATGGTGCGCACGCTCGGCCAG
TTCACGATCTACGAGCGCAATGCGCGGGCCAACTTCCTGCTGGGCGCGGTGCTGGGGGCCGACCTGCTGACGCTCAAGAA
CAGCAGCGCGATCCGCATGAACCCGGGCACGCAGTTCGTCATCACCGGCAAGCCGCTGCTGCGCGAGGCGCTGGCCGTGC
TGGTGTCGGACGACGACTTCTTCTCGGGCAAGGTCACCGTGACCAGCAGTGAACAGCAGGAACACCTCGCCGGCTGCGGC
GCGATCGCCGTCGCGCGCGAACGCGGCCTGGTGTAG

Upstream 100 bases:

>100_bases
GACAACCGGCCGCTGGCGGGCCAGGGCCAGAACGGTGCCTACGCGGGCATCGTCCACTCGTTTTGAGCGCAGGCGTCTCT
CTTCTTCCGCAATGCCACGC

Downstream 100 bases:

>100_bases
ACGTTGAAGGTAGCGCAGGCCTAGCGAGCGCCGCCCTCGCTTTCATCCACAGCAGAACAGGCGTCGCGAAGACGGCGCCG
GCCATCATCAGGAGACGACA

Product: 2-dehydro-3-deoxygalactonokinase

Products: ADP; 2-dehydro-3-deoxy-D-galactonate 6-phosphate

Alternate protein names: 2-Keto-3-Deoxy-Galactonokinase; 2-Keto-3-Deoxygalactonate Kinase; 2-Oxo-3-Deoxygalactonate Kinase; 2-Dehydro-3-Deoxygalactonokinase Protein; Galactonokinase

Number of amino acids: Translated: 331; Mature: 331

Protein sequence:

>331_residues
MNILTIDTGTTNTRVTLWRDDVALCQAARQVGVRDTAITGNRTTLQRGVQDTIEAALQKAGLGIGQVDLVLASGMITSNV
GLCEVPHLPAPAGLRDLAAGMVQAGIPEVSAKPIWFVPGVRNPVENLGLHNIESMDMMRGEEVETMGLVARLSITEPAVI
VLPGSHSKFVHLDAEQRITGCVTTLAGELLHVITHNTILADSLDSDFAGEVDPEMLLAGARSAGSIGLGRACFMVRTLGQ
FTIYERNARANFLLGAVLGADLLTLKNSSAIRMNPGTQFVITGKPLLREALAVLVSDDDFFSGKVTVTSSEQQEHLAGCG
AIAVARERGLV

Sequences:

>Translated_331_residues
MNILTIDTGTTNTRVTLWRDDVALCQAARQVGVRDTAITGNRTTLQRGVQDTIEAALQKAGLGIGQVDLVLASGMITSNV
GLCEVPHLPAPAGLRDLAAGMVQAGIPEVSAKPIWFVPGVRNPVENLGLHNIESMDMMRGEEVETMGLVARLSITEPAVI
VLPGSHSKFVHLDAEQRITGCVTTLAGELLHVITHNTILADSLDSDFAGEVDPEMLLAGARSAGSIGLGRACFMVRTLGQ
FTIYERNARANFLLGAVLGADLLTLKNSSAIRMNPGTQFVITGKPLLREALAVLVSDDDFFSGKVTVTSSEQQEHLAGCG
AIAVARERGLV
>Mature_331_residues
MNILTIDTGTTNTRVTLWRDDVALCQAARQVGVRDTAITGNRTTLQRGVQDTIEAALQKAGLGIGQVDLVLASGMITSNV
GLCEVPHLPAPAGLRDLAAGMVQAGIPEVSAKPIWFVPGVRNPVENLGLHNIESMDMMRGEEVETMGLVARLSITEPAVI
VLPGSHSKFVHLDAEQRITGCVTTLAGELLHVITHNTILADSLDSDFAGEVDPEMLLAGARSAGSIGLGRACFMVRTLGQ
FTIYERNARANFLLGAVLGADLLTLKNSSAIRMNPGTQFVITGKPLLREALAVLVSDDDFFSGKVTVTSSEQQEHLAGCG
AIAVARERGLV

Specific function: D-galactonate degradation; second step. [C]

COG id: COG3734

COG function: function code G; 2-keto-3-deoxy-galactonokinase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1790128, Length=268, Percent_Identity=25, Blast_Score=62, Evalue=6e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 2.7.1.58

Molecular weight: Translated: 35028; Mature: 35028

Theoretical pI: Translated: 5.17; Mature: 5.17

Prosite motif: PS00141 ASP_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNILTIDTGTTNTRVTLWRDDVALCQAARQVGVRDTAITGNRTTLQRGVQDTIEAALQKA
CEEEEEECCCCCCEEEEEECHHHHHHHHHHCCCCCEEECCCHHHHHHHHHHHHHHHHHHH
GLGIGQVDLVLASGMITSNVGLCEVPHLPAPAGLRDLAAGMVQAGIPEVSAKPIWFVPGV
CCCCCHHHHHEECCCCCCCCCEEECCCCCCCCCHHHHHHHHHHCCCCCCCCCCEEEECCC
RNPVENLGLHNIESMDMMRGEEVETMGLVARLSITEPAVIVLPGSHSKFVHLDAEQRITG
CCHHHHCCCCCCCHHHHHCCCCHHHHHEEEEEEECCCEEEEECCCCCCEEEECHHHHHHH
CVTTLAGELLHVITHNTILADSLDSDFAGEVDPEMLLAGARSAGSIGLGRACFMVRTLGQ
HHHHHHHHHHHHHHCCEEEECCCCCCCCCCCCHHHHHCCCCCCCCCCHHHHHHHHHHHCC
FTIYERNARANFLLGAVLGADLLTLKNSSAIRMNPGTQFVITGKPLLREALAVLVSDDDF
EEEEECCCCCHHHHHHHHCCCEEEECCCCEEEECCCCEEEEECCHHHHHHHHEEECCCCC
FSGKVTVTSSEQQEHLAGCGAIAVARERGLV
CCCEEEEECCHHHHHHHCCCHHEEHHHCCCC
>Mature Secondary Structure
MNILTIDTGTTNTRVTLWRDDVALCQAARQVGVRDTAITGNRTTLQRGVQDTIEAALQKA
CEEEEEECCCCCCEEEEEECHHHHHHHHHHCCCCCEEECCCHHHHHHHHHHHHHHHHHHH
GLGIGQVDLVLASGMITSNVGLCEVPHLPAPAGLRDLAAGMVQAGIPEVSAKPIWFVPGV
CCCCCHHHHHEECCCCCCCCCEEECCCCCCCCCHHHHHHHHHHCCCCCCCCCCEEEECCC
RNPVENLGLHNIESMDMMRGEEVETMGLVARLSITEPAVIVLPGSHSKFVHLDAEQRITG
CCHHHHCCCCCCCHHHHHCCCCHHHHHEEEEEEECCCEEEEECCCCCCEEEECHHHHHHH
CVTTLAGELLHVITHNTILADSLDSDFAGEVDPEMLLAGARSAGSIGLGRACFMVRTLGQ
HHHHHHHHHHHHHHCCEEEECCCCCCCCCCCCHHHHHCCCCCCCCCCHHHHHHHHHHHCC
FTIYERNARANFLLGAVLGADLLTLKNSSAIRMNPGTQFVITGKPLLREALAVLVSDDDF
EEEEECCCCCHHHHHHHHCCCEEEECCCCEEEECCCCEEEEECCHHHHHHHHEEECCCCC
FSGKVTVTSSEQQEHLAGCGAIAVARERGLV
CCCEEEEECCHHHHHHHCCCHHEEHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; 2-dehydro-3-deoxy-D-galactonate

Specific reaction: ATP + 2-dehydro-3-deoxy-D-galactonate = ADP + 2-dehydro-3-deoxy-D-galactonate 6-phosphate

General reaction: Phospho group transfer [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA