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The map label for this gene is 17547479

Identifier: 17547479

GI number: 17547479

Start: 2972045

End: 2973106

Strand: Reverse

Name: 17547479

Synonym: RSc2760

Alternate gene names: NA

Gene position: 2973106-2972045 (Counterclockwise)

Preceding gene: 17547484

Following gene: 17547478

Centisome position: 80.0

GC content: 67.98

Gene sequence:

>1062_bases
ATGAACCGAACCACCGCAGTTCGCGGGATGCTGGCGTGCGCGGCGGCGCTGGCCGGCTGGGCCGCCCCCGCCATTGCCGA
GACCAATGTCACGCTCTACGGCCGCGTGGCCACGGGTGTCGACTACATCAGCAACGTGGCGAAGTCCGACGGCGGCACCG
GCGCACTGTGGCGTGGCGCGGGCAACCAGTGGGGAACCAGCATGTTCGGCTTCAAGGGCAGCGAAGACCTGGGCGGGGGG
CTGCAGGCGATCTTCCGGCTGGAATCGGGCTTCGACGCCGCCAAGGGCCGCACCAACGGCGACGCGCTCTTCAACCGTCG
CGCCTATGCCGGCCTGTCGAGCCCGGCCTGGGGCACGCTGACGATGGGCAAGAACCTGTTCATCAGCAACGACGTGTGGT
TCCTGGACCCGACCGGCCAGCAGTTCATCGGCTCGGCGACGCTGGTGCGCGGGCGCAACTGGCCGGGCGCGAACAACCTC
ATCGAATACCAGAGCCCGACCTGGGGCGGCTTTCAGGTCGGCCTGCAGACGGGGCTGGGCGAGCAGCCGGGCTCGATCAC
GGCGTCGCGGCGCGACGGAGTCTCGGCGGTCTATTCGAATGCGCTCGTGGAGCTGCGCGCCATCTACGACGTGATCCGCG
ACGGCAACGGCAACTACTCCGACCTGTACAACTTCTCGAAGGAGTGGACGCTGGGCGGCGTGCTCAAGCTGGATGCCTGG
AAGGTCTACGGCGCTTTCCAGCGCCTGAACGCGCCGGATGCGGCGGCGGGCGCGCCGTCCGCCGCCAGCCACTACTGGAT
CGGGGCGACCTATGACATCACCCGTGCGCTGACACTGATCGGCACGGTCTTCCGCACCGACGTGAACAACGGCGGCGGCC
ACGCTACCCTGTTCATGGCCGGCGCCAACTACAACTTTTCCAAGCGCACGCTGCTGTACGCCACCTACGGCCGTGTGCAG
AACAGCAAGAACGCCGCGTTCTCGGTGGAGGCCACCGACAACCGGCCGCTGGCGGGCCAGGGCCAGAACGGTGCCTACGC
GGGCATCGTCCACTCGTTTTGA

Upstream 100 bases:

>100_bases
ACCGACTACAAATCGCACCTGGGGACGGCGCGGTCGGTGCGCACGCGATCGATCCAGCCGGGCGCCGGACCCCGCCATAA
CAATCACATCAGGAGACGTC

Downstream 100 bases:

>100_bases
GCGCAGGCGTCTCTCTTCTTCCGCAATGCCACGCATGAACATTCTCACCATCGATACGGGTACCACCAACACGCGCGTCA
CGCTCTGGCGCGACGATGTG

Product: porin signal peptide protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 353; Mature: 353

Protein sequence:

>353_residues
MNRTTAVRGMLACAAALAGWAAPAIAETNVTLYGRVATGVDYISNVAKSDGGTGALWRGAGNQWGTSMFGFKGSEDLGGG
LQAIFRLESGFDAAKGRTNGDALFNRRAYAGLSSPAWGTLTMGKNLFISNDVWFLDPTGQQFIGSATLVRGRNWPGANNL
IEYQSPTWGGFQVGLQTGLGEQPGSITASRRDGVSAVYSNALVELRAIYDVIRDGNGNYSDLYNFSKEWTLGGVLKLDAW
KVYGAFQRLNAPDAAAGAPSAASHYWIGATYDITRALTLIGTVFRTDVNNGGGHATLFMAGANYNFSKRTLLYATYGRVQ
NSKNAAFSVEATDNRPLAGQGQNGAYAGIVHSF

Sequences:

>Translated_353_residues
MNRTTAVRGMLACAAALAGWAAPAIAETNVTLYGRVATGVDYISNVAKSDGGTGALWRGAGNQWGTSMFGFKGSEDLGGG
LQAIFRLESGFDAAKGRTNGDALFNRRAYAGLSSPAWGTLTMGKNLFISNDVWFLDPTGQQFIGSATLVRGRNWPGANNL
IEYQSPTWGGFQVGLQTGLGEQPGSITASRRDGVSAVYSNALVELRAIYDVIRDGNGNYSDLYNFSKEWTLGGVLKLDAW
KVYGAFQRLNAPDAAAGAPSAASHYWIGATYDITRALTLIGTVFRTDVNNGGGHATLFMAGANYNFSKRTLLYATYGRVQ
NSKNAAFSVEATDNRPLAGQGQNGAYAGIVHSF
>Mature_353_residues
MNRTTAVRGMLACAAALAGWAAPAIAETNVTLYGRVATGVDYISNVAKSDGGTGALWRGAGNQWGTSMFGFKGSEDLGGG
LQAIFRLESGFDAAKGRTNGDALFNRRAYAGLSSPAWGTLTMGKNLFISNDVWFLDPTGQQFIGSATLVRGRNWPGANNL
IEYQSPTWGGFQVGLQTGLGEQPGSITASRRDGVSAVYSNALVELRAIYDVIRDGNGNYSDLYNFSKEWTLGGVLKLDAW
KVYGAFQRLNAPDAAAGAPSAASHYWIGATYDITRALTLIGTVFRTDVNNGGGHATLFMAGANYNFSKRTLLYATYGRVQ
NSKNAAFSVEATDNRPLAGQGQNGAYAGIVHSF

Specific function: Forms anion selective channels [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To bacterial outer membrane proteins and porins [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001702
- InterPro:   IPR002299 [H]

Pfam domain/function: PF00267 Porin_1 [H]

EC number: NA

Molecular weight: Translated: 37442; Mature: 37442

Theoretical pI: Translated: 9.46; Mature: 9.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRTTAVRGMLACAAALAGWAAPAIAETNVTLYGRVATGVDYISNVAKSDGGTGALWRGA
CCCHHHHHHHHHHHHHHHHHCCCCEEECCEEEEEEHHHHHHHHHHHHHCCCCCCEEECCC
GNQWGTSMFGFKGSEDLGGGLQAIFRLESGFDAAKGRTNGDALFNRRAYAGLSSPAWGTL
CCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHCCHHHCCCCCCCCEEE
TMGKNLFISNDVWFLDPTGQQFIGSATLVRGRNWPGANNLIEYQSPTWGGFQVGLQTGLG
ECCCEEEEECCEEEECCCCHHHHCCEEEEECCCCCCCCCEEEECCCCCCCEEEEHHCCCC
EQPGSITASRRDGVSAVYSNALVELRAIYDVIRDGNGNYSDLYNFSKEWTLGGVLKLDAW
CCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCCEEEECHH
KVYGAFQRLNAPDAAAGAPSAASHYWIGATYDITRALTLIGTVFRTDVNNGGGHATLFMA
HHHHHHHHCCCCCCCCCCCCCCCCEEEECHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEE
GANYNFSKRTLLYATYGRVQNSKNAAFSVEATDNRPLAGQGQNGAYAGIVHSF
ECCCCCCCCEEEEEEECCCCCCCCCEEEEEECCCCCCCCCCCCCCEEEEEECC
>Mature Secondary Structure
MNRTTAVRGMLACAAALAGWAAPAIAETNVTLYGRVATGVDYISNVAKSDGGTGALWRGA
CCCHHHHHHHHHHHHHHHHHCCCCEEECCEEEEEEHHHHHHHHHHHHHCCCCCCEEECCC
GNQWGTSMFGFKGSEDLGGGLQAIFRLESGFDAAKGRTNGDALFNRRAYAGLSSPAWGTL
CCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHCCHHHCCCCCCCCEEE
TMGKNLFISNDVWFLDPTGQQFIGSATLVRGRNWPGANNLIEYQSPTWGGFQVGLQTGLG
ECCCEEEEECCEEEECCCCHHHHCCEEEEECCCCCCCCCEEEECCCCCCCEEEEHHCCCC
EQPGSITASRRDGVSAVYSNALVELRAIYDVIRDGNGNYSDLYNFSKEWTLGGVLKLDAW
CCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCCEEEECHH
KVYGAFQRLNAPDAAAGAPSAASHYWIGATYDITRALTLIGTVFRTDVNNGGGHATLFMA
HHHHHHHHCCCCCCCCCCCCCCCCEEEECHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEE
GANYNFSKRTLLYATYGRVQNSKNAAFSVEATDNRPLAGQGQNGAYAGIVHSF
ECCCCCCCCEEEEEEECCCCCCCCCEEEEEECCCCCCCCCCCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1658537; 12910271 [H]