| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
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The map label for this gene is leuS [H]
Identifier: 17547463
GI number: 17547463
Start: 2953327
End: 2955960
Strand: Reverse
Name: leuS [H]
Synonym: RSc2744
Alternate gene names: 17547463
Gene position: 2955960-2953327 (Counterclockwise)
Preceding gene: 17547464
Following gene: 17547462
Centisome position: 79.54
GC content: 66.51
Gene sequence:
>2634_bases ATGCAAGACAAATATTCCCCGTCCGAGGTCGAACAGCAGGCGCAGCAACACTGGCAGGCACAGGATGCCTACCGCGTGAC CGAACACGCGCGCGCCGCCGACGGCTCGGACAAGCCCAAGTTCTACGCCTGTTCGATGCTGCCGTACCCGTCGGGCAAGC TGCACATGGGCCACGTGCGCAACTACACCATCAACGACGTGATGATGCGTCAGCTGCGCATGAAGGGGTACAACGTGCTG ATGCCGATGGGCTGGGACGCCTTCGGCATGCCGGCCGAGAACGCCGCGCTGAACAACGGCGTGGCGCCGGCCGCCTGGAC CTACGACAACATCGCTTACATGAAGAAGCAGATGCAGTCGATGGGCCTGGCGATCGACTGGTCGCGCGAGGTGGCGACCT GCAGTCCCGACTACTACAAGTGGAACCAGTGGCTGTTCCTGAAGATGCTCGAGAAGGGCATCGCCTACCGCAAGACCGGC ACCGTCAACTGGGACCCGATCGACCAGACCGTGCTCGCCAACGAGCAGGTGATCGACGGGCGCGGCTGGCGCTCGGGCGC GGTGGTGGAAAAGCGCGAGATCCCGATGTACTACCTGCGCATCACCGACTATGCGCAGGAGTTGCTGTCCGACCTGGACC CGCTGGGCTGGCCCGAGCGCGTCAAGCTGATGCAGCAGAACTGGATCGGCAAGAGCGAGGGTGTGCGCTTCGCCTTCCCG CACGGCATTCCCGGCGATGACGGCAAGGTGATCGGCGACGGCAAGCTGTACGTCTTCACCACGCGCGCCGACACCATCAT GGGCGTGACCTTCTGCGCCGTGGCCGCCGAGCACCCGATCGCCGCGCATGCCGCGCAGGGCAATCCCGCGCTTGCCGCGT TCATCGACGAATGCAAGCATGGCAGCGTGATGGAAGCCGACATGGCGACCATGGAAAAGAAGGGCATGCCGACCGGCCTG ACCGTCACGCATCCGCTCACCGGCGAGGCCGTGCCCGTGTGGGTCGGCAACTACGTGCTGATGACCTACGGCGACGGCGC CGTGATGGGCGTGCCCGCGCACGACGAGCGCGACTTCGCCTTCGCCAACAAGTACGGCTTGGCCATCAAGCAGGTCATCG ACGTGAAGGGCCAGCCGTTCGGCACCGAAGCCTGGCAGGAGTGGTATGCCGACAAGGAGCGCGGCGTGCTGGTCCACAGC GGCAAGTACGACGGCCTGGACTATCGGCAGGCCGTGGATGCCGTCGCCGCCGACCTGGCCGCCCAGGGCCTGGGCGAGAA GAAAACCACCTGGCGCCTGCGCGACTGGGGTATCTCGCGCCAGCGCTACTGGGGCACGCCGATCCCGCTGATCCATTGCG ACAGCTGCGGCGTGGTGCCGGTGCCGGAACAGGACCTGCCGGTGCGTCTGCCCGAAGACCTGGTGCCGGACGGCAGCGGC AACCCGCTCGCCAAGGACGCGCGCTTCCTGGAGTGCACGTGCCCGTCGTGCGGCAAGCCTGCGCGCCGCGAGACCGACAC GATGGATACCTTCATCGATTCGTGCTGGTACTACATGCGCTATACGTGCCCGGACGGCGCCACCATGGTCGACGGCCGCA ACGATTACTGGATGCCGATGGACCAGTACATCGGCGGCATCGAGCACGCGATCCTGCACCTGCTGTACGCGCGCTTCTGG ACCAAGGTCATGCGTGATCTGGGCCTGGTCAAGTTCGACGAGCCGTTCACCAAGCTGCTGACGCAGGGCATGGTGCTCAA CGAGACGTACTACCGCGAAGACGCGGCCGGCAAGAAGCAGTGGATCAACCCGGCCGACGTGGATGTACAGACCGACGACC GCGGCCGCCCGATCGGCGCGACGCTCAAGGCCGACGGCCAGCCGGTGGTGATCGGCGGCGTTGAGAAGATGTCGAAGTCG AAGAACAACGGCATCGATCCGCAGGCCCTGATCGACCAGTACGGTGCAGACACCGCGCGCCTGTTCACGATGTTTGCCGC GCCGCCCGAGCAGCAGCTGGAGTGGAGCGATGCCGGCGTGGAGGGCGCCTCGCGCTTCCTGCGCCGGGCGTGGAACTTCG GCGTGGCGCATGCGGAGTCCATCCGTGCCGGCCACGGCAACGGCGTGGTCAACGGCGCAACGGATGCCGATCGCGCGCTG CGCCGCGAGCTGCACACCGTGCTCAAGCAAGCCAACTACGATTACGAGCGCCTGCAGTACAACACCGTCGTCTCGGCGGC GATGAAGATGCTCAACGCGCTGGAAGGCGCCAAGGACGCCGGCGCGGATGCGCGCCGTGAGGGCCTGGGCATCCTGCTGC GCGTGCTGTATCCGGTGGTGCCGCACATCACGCATGTGCTGTGGCAGGAGCTCGGTTACGCGGGTGCCTACGGCGGTCTG CTCGACGCGCCCTGGCCGCAGGTCGACGAGGGCGCCCTGGTGCAGAGTGAGATCGAGCTCGTGCTGCAGGTCAACGGCAA GGTGCGCGGCAGCATCGTGGTGCCGGCCGATGCCGACCGCGCCGCCATCGAGGCGATCGCGGCCAAGGATGAGGCCGTGC ATCGCTTTGCCGAGGGCAAGCCGCCCAAGAAGATCATCGTGGTGCCGGGCCGCCTGGTCAACGTGGTGGCCTGA
Upstream 100 bases:
>100_bases GGTATAATCGGGCCTTTTCCGTCATCGTCATTCAATCCCGGCTGCGCGCACTGGCGTCGCGGCCGCCATCGCCCCGGGGT CTCCGGCGCGCTACGTCATC
Downstream 100 bases:
>100_bases GCGCCGCCCATCCGCATCGAACGCAAGGAACGCATGGTTATGCCGTCTCGTCGCCGTTTCGTTCTCGCCCTGGCCGCTGC GCTGCCGGCGGCGGGCCTGC
Product: leucyl-tRNA synthetase
Products: NA
Alternate protein names: Leucine--tRNA ligase; LeuRS [H]
Number of amino acids: Translated: 877; Mature: 877
Protein sequence:
>877_residues MQDKYSPSEVEQQAQQHWQAQDAYRVTEHARAADGSDKPKFYACSMLPYPSGKLHMGHVRNYTINDVMMRQLRMKGYNVL MPMGWDAFGMPAENAALNNGVAPAAWTYDNIAYMKKQMQSMGLAIDWSREVATCSPDYYKWNQWLFLKMLEKGIAYRKTG TVNWDPIDQTVLANEQVIDGRGWRSGAVVEKREIPMYYLRITDYAQELLSDLDPLGWPERVKLMQQNWIGKSEGVRFAFP HGIPGDDGKVIGDGKLYVFTTRADTIMGVTFCAVAAEHPIAAHAAQGNPALAAFIDECKHGSVMEADMATMEKKGMPTGL TVTHPLTGEAVPVWVGNYVLMTYGDGAVMGVPAHDERDFAFANKYGLAIKQVIDVKGQPFGTEAWQEWYADKERGVLVHS GKYDGLDYRQAVDAVAADLAAQGLGEKKTTWRLRDWGISRQRYWGTPIPLIHCDSCGVVPVPEQDLPVRLPEDLVPDGSG NPLAKDARFLECTCPSCGKPARRETDTMDTFIDSCWYYMRYTCPDGATMVDGRNDYWMPMDQYIGGIEHAILHLLYARFW TKVMRDLGLVKFDEPFTKLLTQGMVLNETYYREDAAGKKQWINPADVDVQTDDRGRPIGATLKADGQPVVIGGVEKMSKS KNNGIDPQALIDQYGADTARLFTMFAAPPEQQLEWSDAGVEGASRFLRRAWNFGVAHAESIRAGHGNGVVNGATDADRAL RRELHTVLKQANYDYERLQYNTVVSAAMKMLNALEGAKDAGADARREGLGILLRVLYPVVPHITHVLWQELGYAGAYGGL LDAPWPQVDEGALVQSEIELVLQVNGKVRGSIVVPADADRAAIEAIAAKDEAVHRFAEGKPPKKIIVVPGRLVNVVA
Sequences:
>Translated_877_residues MQDKYSPSEVEQQAQQHWQAQDAYRVTEHARAADGSDKPKFYACSMLPYPSGKLHMGHVRNYTINDVMMRQLRMKGYNVL MPMGWDAFGMPAENAALNNGVAPAAWTYDNIAYMKKQMQSMGLAIDWSREVATCSPDYYKWNQWLFLKMLEKGIAYRKTG TVNWDPIDQTVLANEQVIDGRGWRSGAVVEKREIPMYYLRITDYAQELLSDLDPLGWPERVKLMQQNWIGKSEGVRFAFP HGIPGDDGKVIGDGKLYVFTTRADTIMGVTFCAVAAEHPIAAHAAQGNPALAAFIDECKHGSVMEADMATMEKKGMPTGL TVTHPLTGEAVPVWVGNYVLMTYGDGAVMGVPAHDERDFAFANKYGLAIKQVIDVKGQPFGTEAWQEWYADKERGVLVHS GKYDGLDYRQAVDAVAADLAAQGLGEKKTTWRLRDWGISRQRYWGTPIPLIHCDSCGVVPVPEQDLPVRLPEDLVPDGSG NPLAKDARFLECTCPSCGKPARRETDTMDTFIDSCWYYMRYTCPDGATMVDGRNDYWMPMDQYIGGIEHAILHLLYARFW TKVMRDLGLVKFDEPFTKLLTQGMVLNETYYREDAAGKKQWINPADVDVQTDDRGRPIGATLKADGQPVVIGGVEKMSKS KNNGIDPQALIDQYGADTARLFTMFAAPPEQQLEWSDAGVEGASRFLRRAWNFGVAHAESIRAGHGNGVVNGATDADRAL RRELHTVLKQANYDYERLQYNTVVSAAMKMLNALEGAKDAGADARREGLGILLRVLYPVVPHITHVLWQELGYAGAYGGL LDAPWPQVDEGALVQSEIELVLQVNGKVRGSIVVPADADRAAIEAIAAKDEAVHRFAEGKPPKKIIVVPGRLVNVVA >Mature_877_residues MQDKYSPSEVEQQAQQHWQAQDAYRVTEHARAADGSDKPKFYACSMLPYPSGKLHMGHVRNYTINDVMMRQLRMKGYNVL MPMGWDAFGMPAENAALNNGVAPAAWTYDNIAYMKKQMQSMGLAIDWSREVATCSPDYYKWNQWLFLKMLEKGIAYRKTG TVNWDPIDQTVLANEQVIDGRGWRSGAVVEKREIPMYYLRITDYAQELLSDLDPLGWPERVKLMQQNWIGKSEGVRFAFP HGIPGDDGKVIGDGKLYVFTTRADTIMGVTFCAVAAEHPIAAHAAQGNPALAAFIDECKHGSVMEADMATMEKKGMPTGL TVTHPLTGEAVPVWVGNYVLMTYGDGAVMGVPAHDERDFAFANKYGLAIKQVIDVKGQPFGTEAWQEWYADKERGVLVHS GKYDGLDYRQAVDAVAADLAAQGLGEKKTTWRLRDWGISRQRYWGTPIPLIHCDSCGVVPVPEQDLPVRLPEDLVPDGSG NPLAKDARFLECTCPSCGKPARRETDTMDTFIDSCWYYMRYTCPDGATMVDGRNDYWMPMDQYIGGIEHAILHLLYARFW TKVMRDLGLVKFDEPFTKLLTQGMVLNETYYREDAAGKKQWINPADVDVQTDDRGRPIGATLKADGQPVVIGGVEKMSKS KNNGIDPQALIDQYGADTARLFTMFAAPPEQQLEWSDAGVEGASRFLRRAWNFGVAHAESIRAGHGNGVVNGATDADRAL RRELHTVLKQANYDYERLQYNTVVSAAMKMLNALEGAKDAGADARREGLGILLRVLYPVVPHITHVLWQELGYAGAYGGL LDAPWPQVDEGALVQSEIELVLQVNGKVRGSIVVPADADRAAIEAIAAKDEAVHRFAEGKPPKKIIVVPGRLVNVVA
Specific function: Unknown
COG id: COG0495
COG function: function code J; Leucyl-tRNA synthetase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-I aminoacyl-tRNA synthetase family [H]
Homologues:
Organism=Homo sapiens, GI7661872, Length=883, Percent_Identity=37.2593431483579, Blast_Score=535, Evalue=1e-152, Organism=Homo sapiens, GI5454158, Length=904, Percent_Identity=22.1238938053097, Blast_Score=108, Evalue=2e-23, Organism=Escherichia coli, GI1786861, Length=883, Percent_Identity=50.6228765571914, Blast_Score=889, Evalue=0.0, Organism=Escherichia coli, GI1790708, Length=400, Percent_Identity=22.75, Blast_Score=95, Evalue=2e-20, Organism=Caenorhabditis elegans, GI71997510, Length=851, Percent_Identity=29.4947121034078, Blast_Score=349, Evalue=3e-96, Organism=Caenorhabditis elegans, GI71997517, Length=844, Percent_Identity=29.5023696682464, Blast_Score=347, Evalue=1e-95, Organism=Caenorhabditis elegans, GI212645227, Length=371, Percent_Identity=28.8409703504043, Blast_Score=150, Evalue=2e-36, Organism=Saccharomyces cerevisiae, GI6323414, Length=823, Percent_Identity=40.8262454434994, Blast_Score=578, Evalue=1e-165, Organism=Saccharomyces cerevisiae, GI6321531, Length=404, Percent_Identity=25.2475247524752, Blast_Score=100, Evalue=1e-21, Organism=Drosophila melanogaster, GI21355409, Length=848, Percent_Identity=35.1415094339623, Blast_Score=436, Evalue=1e-122, Organism=Drosophila melanogaster, GI281366294, Length=889, Percent_Identity=20.5849268841395, Blast_Score=90, Evalue=9e-18,
Paralogues:
None
Copy number: 800 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001412 - InterPro: IPR002300 - InterPro: IPR002302 - InterPro: IPR014729 - InterPro: IPR009080 - InterPro: IPR013155 - InterPro: IPR009008 [H]
Pfam domain/function: PF08264 Anticodon_1; PF00133 tRNA-synt_1 [H]
EC number: =6.1.1.4 [H]
Molecular weight: Translated: 97369; Mature: 97369
Theoretical pI: Translated: 5.83; Mature: 5.83
Prosite motif: PS00178 AA_TRNA_LIGASE_I
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQDKYSPSEVEQQAQQHWQAQDAYRVTEHARAADGSDKPKFYACSMLPYPSGKLHMGHVR CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCEEECCCC NYTINDVMMRQLRMKGYNVLMPMGWDAFGMPAENAALNNGVAPAAWTYDNIAYMKKQMQS CCCHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCCCEECHHHHHHHHHHHHH MGLAIDWSREVATCSPDYYKWNQWLFLKMLEKGIAYRKTGTVNWDPIDQTVLANEQVIDG CCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEECCCCCCCCCCHHHHCCCEEECC RGWRSGAVVEKREIPMYYLRITDYAQELLSDLDPLGWPERVKLMQQNWIGKSEGVRFAFP CCCCCCCEEEECCCCEEEEEHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCEEEECC HGIPGDDGKVIGDGKLYVFTTRADTIMGVTFCAVAAEHPIAAHAAQGNPALAAFIDECKH CCCCCCCCEEEECCEEEEEEECCCHHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHCCC GSVMEADMATMEKKGMPTGLTVTHPLTGEAVPVWVGNYVLMTYGDGAVMGVPAHDERDFA CCEEHHHHHHHHHCCCCCCCEEECCCCCCEEEEEECCEEEEEECCCEEEECCCCCCCCCC FANKYGLAIKQVIDVKGQPFGTEAWQEWYADKERGVLVHSGKYDGLDYRQAVDAVAADLA HHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCEEEECCCCCCCHHHHHHHHHHHHHH AQGLGEKKTTWRLRDWGISRQRYWGTPIPLIHCDSCGVVPVPEQDLPVRLPEDLVPDGSG HHCCCCCCCEEEEHHCCCCCHHCCCCCCCEEEECCCCCCCCCCCCCCCCCCHHHCCCCCC NPLAKDARFLECTCPSCGKPARRETDTMDTFIDSCWYYMRYTCPDGATMVDGRNDYWMPM CCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHEEEEEEECCCCCEEECCCCCCCCCH DQYIGGIEHAILHLLYARFWTKVMRDLGLVKFDEPFTKLLTQGMVLNETYYREDAAGKKQ HHHHCHHHHHHHHHHHHHHHHHHHHHCCCEEECCHHHHHHHCCEEECHHHHHCCCCCHHH WINPADVDVQTDDRGRPIGATLKADGQPVVIGGVEKMSKSKNNGIDPQALIDQYGADTAR CCCCCCCEEEECCCCCCCCEEEECCCCEEEEECHHHHHCCCCCCCCHHHHHHHHCCCHHH LFTMFAAPPEQQLEWSDAGVEGASRFLRRAWNFGVAHAESIRAGHGNGVVNGATDADRAL HHHEECCCCHHHCCCCCCCHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCHHHHHH RRELHTVLKQANYDYERLQYNTVVSAAMKMLNALEGAKDAGADARREGLGILLRVLYPVV HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH PHITHVLWQELGYAGAYGGLLDAPWPQVDEGALVQSEIELVLQVNGKVRGSIVVPADADR HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEECCEEEEEEEECCCEEEEEEECCCCCH AAIEAIAAKDEAVHRFAEGKPPKKIIVVPGRLVNVVA HHHHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHCC >Mature Secondary Structure MQDKYSPSEVEQQAQQHWQAQDAYRVTEHARAADGSDKPKFYACSMLPYPSGKLHMGHVR CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCEEECCCC NYTINDVMMRQLRMKGYNVLMPMGWDAFGMPAENAALNNGVAPAAWTYDNIAYMKKQMQS CCCHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCCCEECHHHHHHHHHHHHH MGLAIDWSREVATCSPDYYKWNQWLFLKMLEKGIAYRKTGTVNWDPIDQTVLANEQVIDG CCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEECCCCCCCCCCHHHHCCCEEECC RGWRSGAVVEKREIPMYYLRITDYAQELLSDLDPLGWPERVKLMQQNWIGKSEGVRFAFP CCCCCCCEEEECCCCEEEEEHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCEEEECC HGIPGDDGKVIGDGKLYVFTTRADTIMGVTFCAVAAEHPIAAHAAQGNPALAAFIDECKH CCCCCCCCEEEECCEEEEEEECCCHHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHCCC GSVMEADMATMEKKGMPTGLTVTHPLTGEAVPVWVGNYVLMTYGDGAVMGVPAHDERDFA CCEEHHHHHHHHHCCCCCCCEEECCCCCCEEEEEECCEEEEEECCCEEEECCCCCCCCCC FANKYGLAIKQVIDVKGQPFGTEAWQEWYADKERGVLVHSGKYDGLDYRQAVDAVAADLA HHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCEEEECCCCCCCHHHHHHHHHHHHHH AQGLGEKKTTWRLRDWGISRQRYWGTPIPLIHCDSCGVVPVPEQDLPVRLPEDLVPDGSG HHCCCCCCCEEEEHHCCCCCHHCCCCCCCEEEECCCCCCCCCCCCCCCCCCHHHCCCCCC NPLAKDARFLECTCPSCGKPARRETDTMDTFIDSCWYYMRYTCPDGATMVDGRNDYWMPM CCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHEEEEEEECCCCCEEECCCCCCCCCH DQYIGGIEHAILHLLYARFWTKVMRDLGLVKFDEPFTKLLTQGMVLNETYYREDAAGKKQ HHHHCHHHHHHHHHHHHHHHHHHHHHCCCEEECCHHHHHHHCCEEECHHHHHCCCCCHHH WINPADVDVQTDDRGRPIGATLKADGQPVVIGGVEKMSKSKNNGIDPQALIDQYGADTAR CCCCCCCEEEECCCCCCCCEEEECCCCEEEEECHHHHHCCCCCCCCHHHHHHHHCCCHHH LFTMFAAPPEQQLEWSDAGVEGASRFLRRAWNFGVAHAESIRAGHGNGVVNGATDADRAL HHHEECCCCHHHCCCCCCCHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCHHHHHH RRELHTVLKQANYDYERLQYNTVVSAAMKMLNALEGAKDAGADARREGLGILLRVLYPVV HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH PHITHVLWQELGYAGAYGGLLDAPWPQVDEGALVQSEIELVLQVNGKVRGSIVVPADADR HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEECCEEEEEEEECCCEEEEEEECCCCCH AAIEAIAAKDEAVHRFAEGKPPKKIIVVPGRLVNVVA HHHHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA