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The map label for this gene is rlpB

Identifier: 17547462

GI number: 17547462

Start: 2952778

End: 2953287

Strand: Reverse

Name: rlpB

Synonym: RSc2743

Alternate gene names: NA

Gene position: 2953287-2952778 (Counterclockwise)

Preceding gene: 17547463

Following gene: 17547461

Centisome position: 79.47

GC content: 64.71

Gene sequence:

>510_bases
ATGCCGTCTCGTCGCCGTTTCGTTCTCGCCCTGGCCGCTGCGCTGCCGGCGGCGGGCCTGCTGTCCGCTTGCGGCTTTCA
CCTGCGCGGCAACAACGATTTCGCCTTCAAGCGGCTGTACATCAACCTGCCGCAGAACTCGCAGATGCGCGCGCAGTTGC
GCCGGCTGATCGACAACGGCTCGGACACGGTGGTCGTCTCCGACAAGCAGGATGCTGACGCCTTCCTGGACGTGCTCAGC
GAGAACCGCGTCAAGACGATTTCGTCGCTGACACCGCAAGGCGTGGTGCGCGAGTACCGCATCACCTACCGCTTCAGCTT
CCAGCTGCGCGACGCGCACGACAACCTGCTGATCCCGCCGTCGGAGATCACCCTGTTCCGCGACCTGTCGTACAACGAGA
CGCAGGTGCTGGCGAAGGACTACGAAGAGGCGGCGCTCTACCGCGACATGCAGGGCGACATCGTCAATCAGCTGGTGCGG
CGGCTTGCCTCCGTCAGGCTGCCGTCGTAA

Upstream 100 bases:

>100_bases
GGGCAAGCCGCCCAAGAAGATCATCGTGGTGCCGGGCCGCCTGGTCAACGTGGTGGCCTGAGCGCCGCCCATCCGCATCG
AACGCAAGGAACGCATGGTT

Downstream 100 bases:

>100_bases
GCCACTCGGGACGGTGCGATCGCCATGCAACTGCGGCTCGATGCGCTGGAAGGCCACCTGAAGCAGGCCGGGTCCAAGGG
CCTGGCGCCGCTGTACGTGG

Product: lipoprotein B precursor transmembrane

Products: NA

Alternate protein names: Lipoprotein; Lipoprotein B; Lipoprotein B Transmembrane; Lipoprotein B Transmembrane; Lipoprotein B Transmembrane Protein

Number of amino acids: Translated: 169; Mature: 168

Protein sequence:

>169_residues
MPSRRRFVLALAAALPAAGLLSACGFHLRGNNDFAFKRLYINLPQNSQMRAQLRRLIDNGSDTVVVSDKQDADAFLDVLS
ENRVKTISSLTPQGVVREYRITYRFSFQLRDAHDNLLIPPSEITLFRDLSYNETQVLAKDYEEAALYRDMQGDIVNQLVR
RLASVRLPS

Sequences:

>Translated_169_residues
MPSRRRFVLALAAALPAAGLLSACGFHLRGNNDFAFKRLYINLPQNSQMRAQLRRLIDNGSDTVVVSDKQDADAFLDVLS
ENRVKTISSLTPQGVVREYRITYRFSFQLRDAHDNLLIPPSEITLFRDLSYNETQVLAKDYEEAALYRDMQGDIVNQLVR
RLASVRLPS
>Mature_168_residues
PSRRRFVLALAAALPAAGLLSACGFHLRGNNDFAFKRLYINLPQNSQMRAQLRRLIDNGSDTVVVSDKQDADAFLDVLSE
NRVKTISSLTPQGVVREYRITYRFSFQLRDAHDNLLIPPSEITLFRDLSYNETQVLAKDYEEAALYRDMQGDIVNQLVRR
LASVRLPS

Specific function: Unknown

COG id: COG2980

COG function: function code M; Rare lipoprotein B

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19203; Mature: 19072

Theoretical pI: Translated: 9.43; Mature: 9.43

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPSRRRFVLALAAALPAAGLLSACGFHLRGNNDFAFKRLYINLPQNSQMRAQLRRLIDNG
CCCCHHHHHHHHHHHCHHHHHHHCCEEEECCCCEEEEEEEEECCCCCHHHHHHHHHHHCC
SDTVVVSDKQDADAFLDVLSENRVKTISSLTPQGVVREYRITYRFSFQLRDAHDNLLIPP
CCEEEEECCCCHHHHHHHHHCCHHHHHHHCCCHHHHHHEEEEEEEEEEEECCCCCEEECC
SEITLFRDLSYNETQVLAKDYEEAALYRDMQGDIVNQLVRRLASVRLPS
CCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
PSRRRFVLALAAALPAAGLLSACGFHLRGNNDFAFKRLYINLPQNSQMRAQLRRLIDNG
CCCHHHHHHHHHHHCHHHHHHHCCEEEECCCCEEEEEEEEECCCCCHHHHHHHHHHHCC
SDTVVVSDKQDADAFLDVLSENRVKTISSLTPQGVVREYRITYRFSFQLRDAHDNLLIPP
CCEEEEECCCCHHHHHHHHHCCHHHHHHHCCCHHHHHHEEEEEEEEEEEECCCCCEEECC
SEITLFRDLSYNETQVLAKDYEEAALYRDMQGDIVNQLVRRLASVRLPS
CCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA