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The map label for this gene is yubM [H]

Identifier: 17547336

GI number: 17547336

Start: 2817109

End: 2818902

Strand: Reverse

Name: yubM [H]

Synonym: RSc2617

Alternate gene names: 17547336

Gene position: 2818902-2817109 (Counterclockwise)

Preceding gene: 17547337

Following gene: 17547335

Centisome position: 75.85

GC content: 67.22

Gene sequence:

>1794_bases
ATGAACGCCGTTACCCAGACCGAAGCCCGCGCCCGCAACGCCGCCGCCGCTATCCCGCTGGAAGCCGCCGACCCGACCAA
GAACCTGATTCTGGTTCCGCTGTCGCGGCTGGTGTCGCGCCCGACCGGGCGCAATGTGCGCAAGACCCCGCGCATGTCCA
TCCCGAACTCGCCGCGAGCATTCAGCGTGTCGGCCTGCTGCAAAACCTCATCGTCATTGCCGCCGCCGATGGCGAGAATT
ACGAAGTGGTGGCCGGTGGCCGGTGGCCGTCGCCTCGCAGCCCTCAAGCTGCTGGCGAAAAAGCGCCGCATCAGCAAGGA
ATGGGAAGTGCCTTGCCTGCTGGTGGCCGATGGCACCGCCCGCACGGCCAGCCTCACCGAGAATGTGCAGCGCGAAGCCA
TGCACCCCGCCGACCAGTTCGAGGCATTCGCCGCGCTGGTGGCCGAAGGCCGACCCATCGAGGACATAGCCGCCGATTTC
AGCGTGTCCCCGCTGGTGGTGCAGCGCCGCTTGAAGCTGGCGAACGTCTCGCCGCGCCTGCTGGCCGACTACCGCGCCAA
AGCCGTGACGCTCGATCAGTTGATGGCCCTTGCCATCACCGACGACCACGCCGCGCAGGAAACCGCGTTCTACGACGCGC
CGACGTGGCAGCGCAACCCTTCGCAATTGCGCGACCGCCTCACCGAGCGCGAGATTGACGCATACCGACATCCGCTGGTG
CGTTTCGTGGGGCTGGATACCTACGGAGCCGCAGGCGGTGGTGTGCGCCGTGACCTGTTCGCGGAAGGTGACGCGGGCGT
GTATCTGACCGATGCCGCGCTGCTGGAACGGCTGGCGCAAGACAAGCTGGCAGGTATCGCCGCCGAGGTGAAGGCCGAAG
GCTGGGCGTGGGTGGATGCCACCCACGCCGTGACCCATGCCGACCTGCACGCCTTCGAGCGTGCGCCGAGGGAACGCCGC
GAACCGAACAAGCGCGAAGCGCAGCGCATCAAGAAGCTGCAAACCAAGATGCACGAACTGGCCGCCGCCGTGGATGACGC
GCTTGATGCCGAGGACGAGGAAAAGGCCGATGCCTTGCAGGAAGAAGGCGAAGCCGTGAGCGCCCACCGCACGGCCGCGC
TGCAAATCGAAGTGGCACGGCATCCGCAAGTGGCGCTGGCTGCGCTGGTGCATGGCATGGTGCAAACGGTGCTGCAAGGC
GGCTACCACGGCCACGACTTGCCGCTGGGCGTGAGCCTGAAAGTGCAAGACCGGCTGGAAGGCATGGCCCCCGACTGGCC
GGAATCCCCCGCCGCCGTCGCTCTGCGCGAGTTGCAACAGGTGGCGGGCGAAGCCTTGCCGCAGGACAGCGCCGAACTGT
TCGCCGCGCTGCTGGCGAAGTCCCAAGACGAACTGGTGCGGCTGCTGGCGGTATGCGTGGCCGTCACGGTGGACGTGGTG
ACACCCCGCACCACACGGCAGCAGCCGGGCGAAGAACTCGCGCAGGCCGTGAGGCTGGACATGGCCGCATGGTGGAAGCC
CACCAATGAGGGCTATTTCCGGCAGGTGCCGAAGGCCGCAATTCTGGAAGCCGTGGAGCGGTTCGCCCCGTCGCACGTCA
CCCGGCTGGCGAAGTTAAAGAAGGCCGACATTGCCAGCGAAGCCGAGCGGCTGGCAGACGGCACGGGCTGGATGCCTGCC
ATCTTCAAGGCCGAAGGGCCGGACGCCACGCAGGCAGAACCACAGGAGCAGGACGACGCCCCGGAGGATGCCGAGGCAAC
AGCAGATGAGCCCGCCGTGGCGCTAGCCGCTTGA

Upstream 100 bases:

>100_bases
TGCGCCAGTTGAAAGCCTGATTCCCCACGCGGCAGGGGCAGGCAGCAGCCCTTGCCGCTTTCTTCGCTGCTTCATCCCTG
AACCCATAGGAGTTATCACC

Downstream 100 bases:

>100_bases
CCCGTGCAAAAGCAAGCGCCCCGGCCTCGACCGGGGCGCTTTGCTGGAAGGAGAACACCCATGACCTACACCACCAGCCG
CCCCCACATGGCGGCGATCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 597; Mature: 597

Protein sequence:

>597_residues
MNAVTQTEARARNAAAAIPLEAADPTKNLILVPLSRLVSRPTGRNVRKTPRMSIPNSPRAFSVSACCKTSSSLPPPMARI
TKWWPVAGGRRLAALKLLAKKRRISKEWEVPCLLVADGTARTASLTENVQREAMHPADQFEAFAALVAEGRPIEDIAADF
SVSPLVVQRRLKLANVSPRLLADYRAKAVTLDQLMALAITDDHAAQETAFYDAPTWQRNPSQLRDRLTEREIDAYRHPLV
RFVGLDTYGAAGGGVRRDLFAEGDAGVYLTDAALLERLAQDKLAGIAAEVKAEGWAWVDATHAVTHADLHAFERAPRERR
EPNKREAQRIKKLQTKMHELAAAVDDALDAEDEEKADALQEEGEAVSAHRTAALQIEVARHPQVALAALVHGMVQTVLQG
GYHGHDLPLGVSLKVQDRLEGMAPDWPESPAAVALRELQQVAGEALPQDSAELFAALLAKSQDELVRLLAVCVAVTVDVV
TPRTTRQQPGEELAQAVRLDMAAWWKPTNEGYFRQVPKAAILEAVERFAPSHVTRLAKLKKADIASEAERLADGTGWMPA
IFKAEGPDATQAEPQEQDDAPEDAEATADEPAVALAA

Sequences:

>Translated_597_residues
MNAVTQTEARARNAAAAIPLEAADPTKNLILVPLSRLVSRPTGRNVRKTPRMSIPNSPRAFSVSACCKTSSSLPPPMARI
TKWWPVAGGRRLAALKLLAKKRRISKEWEVPCLLVADGTARTASLTENVQREAMHPADQFEAFAALVAEGRPIEDIAADF
SVSPLVVQRRLKLANVSPRLLADYRAKAVTLDQLMALAITDDHAAQETAFYDAPTWQRNPSQLRDRLTEREIDAYRHPLV
RFVGLDTYGAAGGGVRRDLFAEGDAGVYLTDAALLERLAQDKLAGIAAEVKAEGWAWVDATHAVTHADLHAFERAPRERR
EPNKREAQRIKKLQTKMHELAAAVDDALDAEDEEKADALQEEGEAVSAHRTAALQIEVARHPQVALAALVHGMVQTVLQG
GYHGHDLPLGVSLKVQDRLEGMAPDWPESPAAVALRELQQVAGEALPQDSAELFAALLAKSQDELVRLLAVCVAVTVDVV
TPRTTRQQPGEELAQAVRLDMAAWWKPTNEGYFRQVPKAAILEAVERFAPSHVTRLAKLKKADIASEAERLADGTGWMPA
IFKAEGPDATQAEPQEQDDAPEDAEATADEPAVALAA
>Mature_597_residues
MNAVTQTEARARNAAAAIPLEAADPTKNLILVPLSRLVSRPTGRNVRKTPRMSIPNSPRAFSVSACCKTSSSLPPPMARI
TKWWPVAGGRRLAALKLLAKKRRISKEWEVPCLLVADGTARTASLTENVQREAMHPADQFEAFAALVAEGRPIEDIAADF
SVSPLVVQRRLKLANVSPRLLADYRAKAVTLDQLMALAITDDHAAQETAFYDAPTWQRNPSQLRDRLTEREIDAYRHPLV
RFVGLDTYGAAGGGVRRDLFAEGDAGVYLTDAALLERLAQDKLAGIAAEVKAEGWAWVDATHAVTHADLHAFERAPRERR
EPNKREAQRIKKLQTKMHELAAAVDDALDAEDEEKADALQEEGEAVSAHRTAALQIEVARHPQVALAALVHGMVQTVLQG
GYHGHDLPLGVSLKVQDRLEGMAPDWPESPAAVALRELQQVAGEALPQDSAELFAALLAKSQDELVRLLAVCVAVTVDVV
TPRTTRQQPGEELAQAVRLDMAAWWKPTNEGYFRQVPKAAILEAVERFAPSHVTRLAKLKKADIASEAERLADGTGWMPA
IFKAEGPDATQAEPQEQDDAPEDAEATADEPAVALAA

Specific function: Unknown

COG id: COG1475

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the parB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004437
- InterPro:   IPR003115 [H]

Pfam domain/function: PF02195 ParBc [H]

EC number: NA

Molecular weight: Translated: 64933; Mature: 64933

Theoretical pI: Translated: 5.70; Mature: 5.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNAVTQTEARARNAAAAIPLEAADPTKNLILVPLSRLVSRPTGRNVRKTPRMSIPNSPRA
CCCCHHHHHHHCCCHHCCCCCCCCCCCCEEEEEHHHHHCCCCCCCCCCCCCCCCCCCCCC
FSVSACCKTSSSLPPPMARITKWWPVAGGRRLAALKLLAKKRRISKEWEVPCLLVADGTA
EEHHHHHHCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEECCCC
RTASLTENVQREAMHPADQFEAFAALVAEGRPIEDIAADFSVSPLVVQRRLKLANVSPRL
CHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHCCCCCHHHHHHHHHHHCCCHHH
LADYRAKAVTLDQLMALAITDDHAAQETAFYDAPTWQRNPSQLRDRLTEREIDAYRHPLV
HHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
RFVGLDTYGAAGGGVRRDLFAEGDAGVYLTDAALLERLAQDKLAGIAAEVKAEGWAWVDA
HHCCCCCCCCCCCCCHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCEEEEEH
THAVTHADLHAFERAPRERREPNKREAQRIKKLQTKMHELAAAVDDALDAEDEEKADALQ
HHHHHHHHHHHHHHCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
EEGEAVSAHRTAALQIEVARHPQVALAALVHGMVQTVLQGGYHGHDLPLGVSLKVQDRLE
HCCCHHHHHCEEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEHHHHC
GMAPDWPESPAAVALRELQQVAGEALPQDSAELFAALLAKSQDELVRLLAVCVAVTVDVV
CCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHC
TPRTTRQQPGEELAQAVRLDMAAWWKPTNEGYFRQVPKAAILEAVERFAPSHVTRLAKLK
CCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHCCHHHHHHHHHHHCHHHHHHHHHHH
KADIASEAERLADGTGWMPAIFKAEGPDATQAEPQEQDDAPEDAEATADEPAVALAA
HHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECC
>Mature Secondary Structure
MNAVTQTEARARNAAAAIPLEAADPTKNLILVPLSRLVSRPTGRNVRKTPRMSIPNSPRA
CCCCHHHHHHHCCCHHCCCCCCCCCCCCEEEEEHHHHHCCCCCCCCCCCCCCCCCCCCCC
FSVSACCKTSSSLPPPMARITKWWPVAGGRRLAALKLLAKKRRISKEWEVPCLLVADGTA
EEHHHHHHCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEECCCC
RTASLTENVQREAMHPADQFEAFAALVAEGRPIEDIAADFSVSPLVVQRRLKLANVSPRL
CHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHCCCCCHHHHHHHHHHHCCCHHH
LADYRAKAVTLDQLMALAITDDHAAQETAFYDAPTWQRNPSQLRDRLTEREIDAYRHPLV
HHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
RFVGLDTYGAAGGGVRRDLFAEGDAGVYLTDAALLERLAQDKLAGIAAEVKAEGWAWVDA
HHCCCCCCCCCCCCCHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCEEEEEH
THAVTHADLHAFERAPRERREPNKREAQRIKKLQTKMHELAAAVDDALDAEDEEKADALQ
HHHHHHHHHHHHHHCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
EEGEAVSAHRTAALQIEVARHPQVALAALVHGMVQTVLQGGYHGHDLPLGVSLKVQDRLE
HCCCHHHHHCEEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEHHHHC
GMAPDWPESPAAVALRELQQVAGEALPQDSAELFAALLAKSQDELVRLLAVCVAVTVDVV
CCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHC
TPRTTRQQPGEELAQAVRLDMAAWWKPTNEGYFRQVPKAAILEAVERFAPSHVTRLAKLK
CCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHCCHHHHHHHHHHHCHHHHHHHHHHH
KADIASEAERLADGTGWMPAIFKAEGPDATQAEPQEQDDAPEDAEATADEPAVALAA
HHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9722640; 9628576 [H]