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The map label for this gene is yubP [H]

Identifier: 17547337

GI number: 17547337

Start: 2818983

End: 2819813

Strand: Reverse

Name: yubP [H]

Synonym: RSc2618

Alternate gene names: 17547337

Gene position: 2819813-2818983 (Counterclockwise)

Preceding gene: 17547339

Following gene: 17547336

Centisome position: 75.87

GC content: 62.82

Gene sequence:

>831_bases
ATGCAACTCGCATCCCGTTTCGCTTCCCGTTCCCCCTCGCTGCGTAGCGATTACCCGCTGACCGATGACCAGATTCACCG
CGTGGCTCCGTCCATCTTCGCGGACGCGCCGCATGAAAGCCGTTCGCAGCGGTACGCCTACATCCCCACCGCCGCCGTGC
TGGCCGAACTGCGCAAGGAGGGGTTTCAACCCTTCATGGTGACGCAAACCCGCGTGCGCGACGAAGGCAAGCGCGAGCAC
ACCAAACACATGCTGCGCCTGCGCCACGCAAGCCAGATCAACGGCGCGGAAGCCAATGAAATCGTGTTGCTCAATTCCCA
TGACGGGACGAGCAGTTATCAGATGCTGGCCGGAATGTTCCGGTTCGTGTGCAGCAATGGCCTTGTATGCGGCGACACCG
TGGCCGATGTGCGCGTGCCCCACAAGGGCGACGTTTCCGGGCATGTCATCGAAGGCGCTTACGAAGTCTTGCGCGGCTTC
GACCGGGTGAAGGATTCCCGCGATGCCATGCGCGCTATCACGCTGGACGAAGGCGAAGCCAAAGTGTTCGCCCGTTCCGC
GCTGGCCTTGAAGTACGACCCCACCGACAACAGACCCGCGCCCATCACGGAAAGCCAAATCCTGATGCCGCGCCGGTTCG
ACGACCGTCGCCCGGACTTGTGGAGCGTGTTCAACCGCACCCAAGAGAACCTGACCAAAGGCGGATTGCATGGCCGCAGC
GTCAACGGACGCCGCCAGCAAACCCGCCCGGTGCAGGGCATTGATTCCGATGTGCGCCTCAATCGCGCCCTCTGGATGCT
GGCCGATGGCCTGCGCCAGTTGAAAGCCTGA

Upstream 100 bases:

>100_bases
CCTCGTGCCAACCGCACCAAACAGCCGAAAGGCTGGGCTCCGAATCTAGGAATCCGGTGTTCGGTTTGAACAGCAAACCC
TTTTCGTCAGGAGAAAGACC

Downstream 100 bases:

>100_bases
TTCCCCACGCGGCAGGGGCAGGCAGCAGCCCTTGCCGCTTTCTTCGCTGCTTCATCCCTGAACCCATAGGAGTTATCACC
ATGAACGCCGTTACCCAGAC

Product: homologue to gene 32 protein of F plasmid

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 276; Mature: 276

Protein sequence:

>276_residues
MQLASRFASRSPSLRSDYPLTDDQIHRVAPSIFADAPHESRSQRYAYIPTAAVLAELRKEGFQPFMVTQTRVRDEGKREH
TKHMLRLRHASQINGAEANEIVLLNSHDGTSSYQMLAGMFRFVCSNGLVCGDTVADVRVPHKGDVSGHVIEGAYEVLRGF
DRVKDSRDAMRAITLDEGEAKVFARSALALKYDPTDNRPAPITESQILMPRRFDDRRPDLWSVFNRTQENLTKGGLHGRS
VNGRRQQTRPVQGIDSDVRLNRALWMLADGLRQLKA

Sequences:

>Translated_276_residues
MQLASRFASRSPSLRSDYPLTDDQIHRVAPSIFADAPHESRSQRYAYIPTAAVLAELRKEGFQPFMVTQTRVRDEGKREH
TKHMLRLRHASQINGAEANEIVLLNSHDGTSSYQMLAGMFRFVCSNGLVCGDTVADVRVPHKGDVSGHVIEGAYEVLRGF
DRVKDSRDAMRAITLDEGEAKVFARSALALKYDPTDNRPAPITESQILMPRRFDDRRPDLWSVFNRTQENLTKGGLHGRS
VNGRRQQTRPVQGIDSDVRLNRALWMLADGLRQLKA
>Mature_276_residues
MQLASRFASRSPSLRSDYPLTDDQIHRVAPSIFADAPHESRSQRYAYIPTAAVLAELRKEGFQPFMVTQTRVRDEGKREH
TKHMLRLRHASQINGAEANEIVLLNSHDGTSSYQMLAGMFRFVCSNGLVCGDTVADVRVPHKGDVSGHVIEGAYEVLRGF
DRVKDSRDAMRAITLDEGEAKVFARSALALKYDPTDNRPAPITESQILMPRRFDDRRPDLWSVFNRTQENLTKGGLHGRS
VNGRRQQTRPVQGIDSDVRLNRALWMLADGLRQLKA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0380 family [H]

Homologues:

Organism=Escherichia coli, GI1788987, Length=269, Percent_Identity=57.2490706319703, Blast_Score=318, Evalue=4e-88,
Organism=Escherichia coli, GI87081705, Length=270, Percent_Identity=57.4074074074074, Blast_Score=312, Evalue=1e-86,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009276 [H]

Pfam domain/function: PF06067 DUF932 [H]

EC number: NA

Molecular weight: Translated: 31125; Mature: 31125

Theoretical pI: Translated: 10.02; Mature: 10.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQLASRFASRSPSLRSDYPLTDDQIHRVAPSIFADAPHESRSQRYAYIPTAAVLAELRKE
CCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHCCEEEECCHHHHHHHHHHC
GFQPFMVTQTRVRDEGKREHTKHMLRLRHASQINGAEANEIVLLNSHDGTSSYQMLAGMF
CCCCEEEHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHH
RFVCSNGLVCGDTVADVRVPHKGDVSGHVIEGAYEVLRGFDRVKDSRDAMRAITLDEGEA
HHHHCCCCEECCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCH
KVFARSALALKYDPTDNRPAPITESQILMPRRFDDRRPDLWSVFNRTQENLTKGGLHGRS
HHHHHHHEEEEECCCCCCCCCCCCCCEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCC
VNGRRQQTRPVQGIDSDVRLNRALWMLADGLRQLKA
CCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MQLASRFASRSPSLRSDYPLTDDQIHRVAPSIFADAPHESRSQRYAYIPTAAVLAELRKE
CCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHCCEEEECCHHHHHHHHHHC
GFQPFMVTQTRVRDEGKREHTKHMLRLRHASQINGAEANEIVLLNSHDGTSSYQMLAGMF
CCCCEEEHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHH
RFVCSNGLVCGDTVADVRVPHKGDVSGHVIEGAYEVLRGFDRVKDSRDAMRAITLDEGEA
HHHHCCCCEECCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCH
KVFARSALALKYDPTDNRPAPITESQILMPRRFDDRRPDLWSVFNRTQENLTKGGLHGRS
HHHHHHHEEEEECCCCCCCCCCCCCCEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCC
VNGRRQQTRPVQGIDSDVRLNRALWMLADGLRQLKA
CCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2693941; 2315017 [H]