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The map label for this gene is 17547320

Identifier: 17547320

GI number: 17547320

Start: 2804432

End: 2806483

Strand: Reverse

Name: 17547320

Synonym: RSc2601

Alternate gene names: NA

Gene position: 2806483-2804432 (Counterclockwise)

Preceding gene: 17547321

Following gene: 17547318

Centisome position: 75.52

GC content: 68.96

Gene sequence:

>2052_bases
ATGTCCGCGTGCTTTGCACGACCGGACACGCCAGAGCTTGCAGGGAGCGCGGCCATGACCGACCGCCGCGACGACGATTT
CCGCGTGCGTCCCAGCGCCCCGAAGAATCGGGGCAAGGGCCAGGGCCAGAGCTTCGTTTCCAAGGTGCTCAAGCAGGCTG
GCAAGGCCAGCGGCGGCAAGTCCTCGATGCGCCATTCCGCCGCGTCCGGCGGCCAGGGCCAGCGCGCCGGCCAGCGGCCC
GGCTCGCGCCTGGGGCGCGGCCATACGGCGGCGCGTTTCGCCGGGGCGAAGCTGACGCCTATGTCGCGGCGCGTGACGAT
CAAGACCTTGCTGGTCAATCAACGCAATGCCAGCCCGCAGTCGCTAGCCAAGCATCTGCGCTACATCGAGCGCGACGGCG
CGGGCCGCGATGGCGAACCTGGGCGGGCCTACGGGCCGCAGACCGACGAAGCCGACCTTGATGCCTTCAAGGAGCGGGCC
GCCGACGACCGGCACCATTTCCGCTTCATCGTTTCGCCCGAGGACGGGGCCGAGCTGGACGACCTGCGCACCTACACCCG
GCATCTGGTGAACCGGATGGAAGCCGACCTGGGGACGCGGCTGGACTGGGTGGCGGTCGATCATTGGAATACCGACAACC
CGCACACACACCTGATCGTGCGCGGGCGCGACGACACCGGCAAAGACCTCATCATCGCCGGCGACTACATCGCCCACGGC
TTCCGCCATCGGGCCGCCGAACTGGCGACGGAATGGCTGGGGCCACGCACCGAACTGGAGATCCAGCAGACCTTGCAGCG
CGAGGTGGAGCAAGAGCGGTGGACGAGCCTCGACCGCACGCTGCAACGCGAGGCCGGCGAAGATGGCCGGGTGCAGATCG
AACGCTTCAACGAACCCCGGCTGCAACGCCAGCGCCTGCTGCTGATCGGCCGCCTGCAACGCTTGCAGCGCTTGGGCCTG
GCCGACGAGACGCAGCCCGGCGCCTGGGCCGTCCATGCGGACGCGGAGAAGACCTTGCGTGCCTTGGGCGAGCGTGGCGA
CATCATCCGCACGATGCAGCGGGCCATGAGCGGCCAGCCGCGCGAGCTGGCGGTATTCGAGCCAGGCGATGACGGCCGCA
CCATCGTCGGCCGTTTGGCCGCGAAGGGGCTGGCCGACGAGCTGCACGACCGCGGCTATCTGGTCATCGACGGCGTGGAC
GGTAAGGCCCACTACGTCGCGCTGAACGCCCGCGACGAGTTGGCGAACTATCCCACCGGAGCCGTGGTGGAGGTGCGTGG
TTCCGCCGAGGTGCGCGCGGCCGACAAGAACATCACCGCGCTGGCGAGCGATGGTCTGTACCGCACCAATCATCACCTGG
CGATTGAGCAAGGCCGAGCCAAGCCCGGCCGCGACCCGCAGGAAGTCATCGCGGCCCACGTCCGCCGGCTGGAAGCCCTG
CGCCGTGCAGGTATCGTGGAGCGCGTGGCCGATGGCTTGTGGAAGGTGCCGAACGACCTGGCCGAGCGTGGCCGCCAGTA
CGACGCGCAGCGCCTAGGTGGCGTGGCCGTGGAAATGAAATCGCATCTGCCCATCGAGCGACAGGCCCGCTTCATAGGCG
CGACGTGGCTTGACCAGCAGTTGATCGGCGGCGGCCGGGGGCTGGGCGACCTGGGCTTTGGCGGCGACGCTAAGCAGGCC
ATGCAGCAACGGGCGGACTTCTTGGCCGAACAGGGGCTGGCCGAGCAGCGGGGACAGCGAGTGATCCTCGCGCGCAACCT
GCTGGGCACGCTGCGTAACCGAGAGTTGGTGCATGCCGCCAAGGACATTGCCGCCGACACCGGCCTGGAGCATCGACCCG
TAGGGGACGGTCAGCGTGTGGCCGGCATCTACCGGCGTTCGATCATGCTAGCGAGTGGGCGGTACGCGATGCTGGACGAC
GGCAAGGGATTCAGCCTGTTGCCGTGGCGTCCGGTGATCGAACAACGGCTGGGGCAGCAGATCGCCGCGACGGTGCGCGG
CGGCGGGGTGTCGTGGGAGGTAGGGCGCGCCAGAGGGCCGTCAGTCGGCTGA

Upstream 100 bases:

>100_bases
CCTGGCCGCGTCGAAAGCCTGTCTGCACATGGGGGGGGCGCGGCACGGAGCGGCTTCGCCGCCGTGCCGCGTGGGGCGCG
AGGCCCGCGCCAAAGCAGGC

Downstream 100 bases:

>100_bases
CGCCTGGCTCAGCAACGGCCTTGTCCCAAGCTCCCCCACGATCCAGTCTGCGAACGCCCGCGTGTTGGCTGGCACCAATC
GCGCGGATGGATGCACCAGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 683; Mature: 682

Protein sequence:

>683_residues
MSACFARPDTPELAGSAAMTDRRDDDFRVRPSAPKNRGKGQGQSFVSKVLKQAGKASGGKSSMRHSAASGGQGQRAGQRP
GSRLGRGHTAARFAGAKLTPMSRRVTIKTLLVNQRNASPQSLAKHLRYIERDGAGRDGEPGRAYGPQTDEADLDAFKERA
ADDRHHFRFIVSPEDGAELDDLRTYTRHLVNRMEADLGTRLDWVAVDHWNTDNPHTHLIVRGRDDTGKDLIIAGDYIAHG
FRHRAAELATEWLGPRTELEIQQTLQREVEQERWTSLDRTLQREAGEDGRVQIERFNEPRLQRQRLLLIGRLQRLQRLGL
ADETQPGAWAVHADAEKTLRALGERGDIIRTMQRAMSGQPRELAVFEPGDDGRTIVGRLAAKGLADELHDRGYLVIDGVD
GKAHYVALNARDELANYPTGAVVEVRGSAEVRAADKNITALASDGLYRTNHHLAIEQGRAKPGRDPQEVIAAHVRRLEAL
RRAGIVERVADGLWKVPNDLAERGRQYDAQRLGGVAVEMKSHLPIERQARFIGATWLDQQLIGGGRGLGDLGFGGDAKQA
MQQRADFLAEQGLAEQRGQRVILARNLLGTLRNRELVHAAKDIAADTGLEHRPVGDGQRVAGIYRRSIMLASGRYAMLDD
GKGFSLLPWRPVIEQRLGQQIAATVRGGGVSWEVGRARGPSVG

Sequences:

>Translated_683_residues
MSACFARPDTPELAGSAAMTDRRDDDFRVRPSAPKNRGKGQGQSFVSKVLKQAGKASGGKSSMRHSAASGGQGQRAGQRP
GSRLGRGHTAARFAGAKLTPMSRRVTIKTLLVNQRNASPQSLAKHLRYIERDGAGRDGEPGRAYGPQTDEADLDAFKERA
ADDRHHFRFIVSPEDGAELDDLRTYTRHLVNRMEADLGTRLDWVAVDHWNTDNPHTHLIVRGRDDTGKDLIIAGDYIAHG
FRHRAAELATEWLGPRTELEIQQTLQREVEQERWTSLDRTLQREAGEDGRVQIERFNEPRLQRQRLLLIGRLQRLQRLGL
ADETQPGAWAVHADAEKTLRALGERGDIIRTMQRAMSGQPRELAVFEPGDDGRTIVGRLAAKGLADELHDRGYLVIDGVD
GKAHYVALNARDELANYPTGAVVEVRGSAEVRAADKNITALASDGLYRTNHHLAIEQGRAKPGRDPQEVIAAHVRRLEAL
RRAGIVERVADGLWKVPNDLAERGRQYDAQRLGGVAVEMKSHLPIERQARFIGATWLDQQLIGGGRGLGDLGFGGDAKQA
MQQRADFLAEQGLAEQRGQRVILARNLLGTLRNRELVHAAKDIAADTGLEHRPVGDGQRVAGIYRRSIMLASGRYAMLDD
GKGFSLLPWRPVIEQRLGQQIAATVRGGGVSWEVGRARGPSVG
>Mature_682_residues
SACFARPDTPELAGSAAMTDRRDDDFRVRPSAPKNRGKGQGQSFVSKVLKQAGKASGGKSSMRHSAASGGQGQRAGQRPG
SRLGRGHTAARFAGAKLTPMSRRVTIKTLLVNQRNASPQSLAKHLRYIERDGAGRDGEPGRAYGPQTDEADLDAFKERAA
DDRHHFRFIVSPEDGAELDDLRTYTRHLVNRMEADLGTRLDWVAVDHWNTDNPHTHLIVRGRDDTGKDLIIAGDYIAHGF
RHRAAELATEWLGPRTELEIQQTLQREVEQERWTSLDRTLQREAGEDGRVQIERFNEPRLQRQRLLLIGRLQRLQRLGLA
DETQPGAWAVHADAEKTLRALGERGDIIRTMQRAMSGQPRELAVFEPGDDGRTIVGRLAAKGLADELHDRGYLVIDGVDG
KAHYVALNARDELANYPTGAVVEVRGSAEVRAADKNITALASDGLYRTNHHLAIEQGRAKPGRDPQEVIAAHVRRLEALR
RAGIVERVADGLWKVPNDLAERGRQYDAQRLGGVAVEMKSHLPIERQARFIGATWLDQQLIGGGRGLGDLGFGGDAKQAM
QQRADFLAEQGLAEQRGQRVILARNLLGTLRNRELVHAAKDIAADTGLEHRPVGDGQRVAGIYRRSIMLASGRYAMLDDG
KGFSLLPWRPVIEQRLGQQIAATVRGGGVSWEVGRARGPSVG

Specific function: Unknown

COG id: COG3843

COG function: function code U; Type IV secretory pathway, VirD2 components (relaxase)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 75216; Mature: 75085

Theoretical pI: Translated: 10.28; Mature: 10.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.1 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.1 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSACFARPDTPELAGSAAMTDRRDDDFRVRPSAPKNRGKGQGQSFVSKVLKQAGKASGGK
CCCCCCCCCCHHHCCCHHCCCCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCCCH
SSMRHSAASGGQGQRAGQRPGSRLGRGHTAARFAGAKLTPMSRRVTIKTLLVNQRNASPQ
HHHHHHHCCCCCCCCCCCCCCHHHCCCCHHHHHCCCCCCCCCCEEEEEEEEEECCCCCHH
SLAKHLRYIERDGAGRDGEPGRAYGPQTDEADLDAFKERAADDRHHFRFIVSPEDGAELD
HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCEEEEEECCCCCCCHH
DLRTYTRHLVNRMEADLGTRLDWVAVDHWNTDNPHTHLIVRGRDDTGKDLIIAGDYIAHG
HHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCEEEEEECCCCCCCEEEEECHHHHHH
FRHRAAELATEWLGPRTELEIQQTLQREVEQERWTSLDRTLQREAGEDGRVQIERFNEPR
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHH
LQRQRLLLIGRLQRLQRLGLADETQPGAWAVHADAEKTLRALGERGDIIRTMQRAMSGQP
HHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCHHHHHHHHHCCCHHHHHHHHHHCCCC
RELAVFEPGDDGRTIVGRLAAKGLADELHDRGYLVIDGVDGKAHYVALNARDELANYPTG
CEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCEEEEEEECHHHHHCCCCC
AVVEVRGSAEVRAADKNITALASDGLYRTNHHLAIEQGRAKPGRDPQEVIAAHVRRLEAL
CEEEECCCCEEEECCCCEEEEECCCEEECCCEEEEECCCCCCCCCHHHHHHHHHHHHHHH
RRAGIVERVADGLWKVPNDLAERGRQYDAQRLGGVAVEMKSHLPIERQARFIGATWLDQQ
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCEEEEHHHCCCHHHHHHHHHHHHHHHH
LIGGGRGLGDLGFGGDAKQAMQQRADFLAEQGLAEQRGQRVILARNLLGTLRNRELVHAA
HHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHCCCEEEEHHHHHHHHHCHHHHHHH
KDIAADTGLEHRPVGDGQRVAGIYRRSIMLASGRYAMLDDGKGFSLLPWRPVIEQRLGQQ
HHHHHHCCCCCCCCCCCHHHHHHHHHHHEEECCCEEEEECCCCCCCCCCHHHHHHHHHHH
IAATVRGGGVSWEVGRARGPSVG
HHHHHCCCCCEEECCCCCCCCCC
>Mature Secondary Structure 
SACFARPDTPELAGSAAMTDRRDDDFRVRPSAPKNRGKGQGQSFVSKVLKQAGKASGGK
CCCCCCCCCHHHCCCHHCCCCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCCCH
SSMRHSAASGGQGQRAGQRPGSRLGRGHTAARFAGAKLTPMSRRVTIKTLLVNQRNASPQ
HHHHHHHCCCCCCCCCCCCCCHHHCCCCHHHHHCCCCCCCCCCEEEEEEEEEECCCCCHH
SLAKHLRYIERDGAGRDGEPGRAYGPQTDEADLDAFKERAADDRHHFRFIVSPEDGAELD
HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCEEEEEECCCCCCCHH
DLRTYTRHLVNRMEADLGTRLDWVAVDHWNTDNPHTHLIVRGRDDTGKDLIIAGDYIAHG
HHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCEEEEEECCCCCCCEEEEECHHHHHH
FRHRAAELATEWLGPRTELEIQQTLQREVEQERWTSLDRTLQREAGEDGRVQIERFNEPR
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHH
LQRQRLLLIGRLQRLQRLGLADETQPGAWAVHADAEKTLRALGERGDIIRTMQRAMSGQP
HHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCHHHHHHHHHCCCHHHHHHHHHHCCCC
RELAVFEPGDDGRTIVGRLAAKGLADELHDRGYLVIDGVDGKAHYVALNARDELANYPTG
CEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCEEEEEEECHHHHHCCCCC
AVVEVRGSAEVRAADKNITALASDGLYRTNHHLAIEQGRAKPGRDPQEVIAAHVRRLEAL
CEEEECCCCEEEECCCCEEEEECCCEEECCCEEEEECCCCCCCCCHHHHHHHHHHHHHHH
RRAGIVERVADGLWKVPNDLAERGRQYDAQRLGGVAVEMKSHLPIERQARFIGATWLDQQ
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCEEEEHHHCCCHHHHHHHHHHHHHHHH
LIGGGRGLGDLGFGGDAKQAMQQRADFLAEQGLAEQRGQRVILARNLLGTLRNRELVHAA
HHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHCCCEEEEHHHHHHHHHCHHHHHHH
KDIAADTGLEHRPVGDGQRVAGIYRRSIMLASGRYAMLDDGKGFSLLPWRPVIEQRLGQQ
HHHHHHCCCCCCCCCCCHHHHHHHHHHHEEECCCEEEEECCCCCCCCCCHHHHHHHHHHH
IAATVRGGGVSWEVGRARGPSVG
HHHHHCCCCCEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA