| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
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The map label for this gene is 17547309
Identifier: 17547309
GI number: 17547309
Start: 2796232
End: 2796618
Strand: Reverse
Name: 17547309
Synonym: RSc2590
Alternate gene names: NA
Gene position: 2796618-2796232 (Counterclockwise)
Preceding gene: 17547312
Following gene: 17547308
Centisome position: 75.25
GC content: 58.4
Gene sequence:
>387_bases ATGCCGACCCCACTCGAAACTGTTTCACATTTCTGCGCGGCGTTCGTCGAAGACGGCGGAAGGCCAGCCGTGCGTCGCTG GTTCACACCTGACACCCGCTGGGTCAACGAGGGCGTATCCGCTACGACGGGAGTCGATGAGGCCATTGCCATGATCGACG GACTGGAGACATCGATGGGTATCTCGACGGTCCATTTTGATGTAATCGCGATTGCTGCCGACGGATCTCGTGTACTTACC GAAAGGGTCGACCGCTTCGAGCGGGCCGACGGCGCCGAAATCGGACGCGTGACCTTGATGGGAATCTTCAAAGTGGAGGG CGAGAAGATTGTCGAGTGGCGAGACTACTTCGATGTCAACGCCCTTCAGGCGTTCAATGCCGGCTAA
Upstream 100 bases:
>100_bases CAATAACGGCGCAAGAATTGGCATCGTGGCTTTGCGGGCCGGCACCTATCCTGAGGCTTAAGCCAAATCTATCAGGCTTT TGACGACTGAAGGAACTGAC
Downstream 100 bases:
>100_bases GGAGCGGCTCTTGATAGCATAACACAAGACCCCGGCAACTTGCCCTTTGATGTCGTCTACTTTGCGCTTAGATACTTTGG GGTGGACACATGAGATACGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 128; Mature: 127
Protein sequence:
>128_residues MPTPLETVSHFCAAFVEDGGRPAVRRWFTPDTRWVNEGVSATTGVDEAIAMIDGLETSMGISTVHFDVIAIAADGSRVLT ERVDRFERADGAEIGRVTLMGIFKVEGEKIVEWRDYFDVNALQAFNAG
Sequences:
>Translated_128_residues MPTPLETVSHFCAAFVEDGGRPAVRRWFTPDTRWVNEGVSATTGVDEAIAMIDGLETSMGISTVHFDVIAIAADGSRVLT ERVDRFERADGAEIGRVTLMGIFKVEGEKIVEWRDYFDVNALQAFNAG >Mature_127_residues PTPLETVSHFCAAFVEDGGRPAVRRWFTPDTRWVNEGVSATTGVDEAIAMIDGLETSMGISTVHFDVIAIAADGSRVLTE RVDRFERADGAEIGRVTLMGIFKVEGEKIVEWRDYFDVNALQAFNAG
Specific function: Unknown
COG id: COG4308
COG function: function code Q; Limonene-1,2-epoxide hydrolase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14053; Mature: 13922
Theoretical pI: Translated: 4.32; Mature: 4.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTPLETVSHFCAAFVEDGGRPAVRRWFTPDTRWVNEGVSATTGVDEAIAMIDGLETSMG CCCHHHHHHHHHHHHHHCCCCHHHHCCCCCCHHHHHCCCCCCCCHHHHHHHHHCCCCCCC ISTVHFDVIAIAADGSRVLTERVDRFERADGAEIGRVTLMGIFKVEGEKIVEWRDYFDVN CEEEEEEEEEEECCCCHHHHHHHHHHHCCCCCCCCEEEEEEEEEECCCEEEHHHHHCCCH ALQAFNAG HHHHCCCC >Mature Secondary Structure PTPLETVSHFCAAFVEDGGRPAVRRWFTPDTRWVNEGVSATTGVDEAIAMIDGLETSMG CCHHHHHHHHHHHHHHCCCCHHHHCCCCCCHHHHHCCCCCCCCHHHHHHHHHCCCCCCC ISTVHFDVIAIAADGSRVLTERVDRFERADGAEIGRVTLMGIFKVEGEKIVEWRDYFDVN CEEEEEEEEEEECCCCHHHHHHHHHHHCCCCCCCCEEEEEEEEEECCCEEEHHHHHCCCH ALQAFNAG HHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA