| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
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The map label for this gene is 17547308
Identifier: 17547308
GI number: 17547308
Start: 2795654
End: 2796046
Strand: Reverse
Name: 17547308
Synonym: RSc2589
Alternate gene names: NA
Gene position: 2796046-2795654 (Counterclockwise)
Preceding gene: 17547309
Following gene: 17547307
Centisome position: 75.24
GC content: 57.0
Gene sequence:
>393_bases ATGTCAACGCCTATCGAAATCGTCACTGCCTTCTGCGCTACTTTCCCAGAGGATGATGGGAAGGCTGCCATCAGGCGATA TTTCACGCCGGACACGGTTTGGATCAATGAAGGGATTTCCAAAACTACGGGCATCGAAGAAGCAATCGCCTTCCTCGGGC GACCGAACAGATCGCCAAGCATCGCGGCCGTGCACTTCGACATTCTTGCCATCGCCGCGGATGGAAATCGCGTACTGACT GAGCGACTGGATCGCTTTGTACGCGCCGACGGCAGCGAGATCGCCGCGATCAGGGTAATGGGCATATTTGAAGTGGAAGG CGACCGTATCGTGGCTTGGCGTGACTATGCCGACGTCAACGCCGGGAGGAAGATCACCCCCGACAAGCGCTGA
Upstream 100 bases:
>100_bases ACACATGAGATACGTGTTATCAGTATTGGTTGCGATGATTTTTTCCAGCGCCGCCTGGGCTCAATCGCCAGTGGCATCTG ACAGGACGCAAGACAGTCGA
Downstream 100 bases:
>100_bases CGCTTCGGGGACGTGACAGTTGCCTCTTGAGTGATGTTTTTCATTACACCAAAAGCGTAACCCAAGGCCTCTCAAATTTG CTTTGAAATAAGTAGGCTCG
Product: hypothetical protein
Products: NA
Alternate protein names: Limonene-1 2-Epoxide Hydrolase; Epoxide Hydrolase
Number of amino acids: Translated: 130; Mature: 129
Protein sequence:
>130_residues MSTPIEIVTAFCATFPEDDGKAAIRRYFTPDTVWINEGISKTTGIEEAIAFLGRPNRSPSIAAVHFDILAIAADGNRVLT ERLDRFVRADGSEIAAIRVMGIFEVEGDRIVAWRDYADVNAGRKITPDKR
Sequences:
>Translated_130_residues MSTPIEIVTAFCATFPEDDGKAAIRRYFTPDTVWINEGISKTTGIEEAIAFLGRPNRSPSIAAVHFDILAIAADGNRVLT ERLDRFVRADGSEIAAIRVMGIFEVEGDRIVAWRDYADVNAGRKITPDKR >Mature_129_residues STPIEIVTAFCATFPEDDGKAAIRRYFTPDTVWINEGISKTTGIEEAIAFLGRPNRSPSIAAVHFDILAIAADGNRVLTE RLDRFVRADGSEIAAIRVMGIFEVEGDRIVAWRDYADVNAGRKITPDKR
Specific function: Unknown
COG id: COG4308
COG function: function code Q; Limonene-1,2-epoxide hydrolase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14369; Mature: 14238
Theoretical pI: Translated: 4.96; Mature: 4.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTPIEIVTAFCATFPEDDGKAAIRRYFTPDTVWINEGISKTTGIEEAIAFLGRPNRSPS CCCHHHHHHHHHHHCCCCCCCHHHHHCCCCCEEEECCCCCCCCCHHHHHHHHCCCCCCCC IAAVHFDILAIAADGNRVLTERLDRFVRADGSEIAAIRVMGIFEVEGDRIVAWRDYADVN EEEEEEEEEEEEECCCCHHHHHHHHHHHCCCCCEEEEEEEEEEEECCCEEEEEECCCCCC AGRKITPDKR CCCCCCCCCC >Mature Secondary Structure STPIEIVTAFCATFPEDDGKAAIRRYFTPDTVWINEGISKTTGIEEAIAFLGRPNRSPS CCHHHHHHHHHHHCCCCCCCHHHHHCCCCCEEEECCCCCCCCCHHHHHHHHCCCCCCCC IAAVHFDILAIAADGNRVLTERLDRFVRADGSEIAAIRVMGIFEVEGDRIVAWRDYADVN EEEEEEEEEEEEECCCCHHHHHHHHHHHCCCCCEEEEEEEEEEEECCCEEEEEECCCCCC AGRKITPDKR CCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA