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The map label for this gene is trbC

Identifier: 17547302

GI number: 17547302

Start: 2790103

End: 2790495

Strand: Reverse

Name: trbC

Synonym: RSc2583

Alternate gene names: NA

Gene position: 2790495-2790103 (Counterclockwise)

Preceding gene: 17547303

Following gene: 17547301

Centisome position: 75.09

GC content: 65.39

Gene sequence:

>393_bases
GTGACGCAGATGCACGTTCCTGCTTTCCGCTTTTCCGTAAATCCGATTCCCCGCGTATCCAGCCTCGCGTGGCTGCGCAG
CCTGGCCCGCCCGGCGGGGCAAGGGCTGCTGCTGGCCGCGCTGCTGCTGTTCATCGCCGGAACTGCGCAGGCCGCCGGTT
CCTCGATGCCGTGGGAAGGCCCGCTGCAATCCATTCTGGAGTCGATCCAGGGGCCGGTGGCGCGCATCGTCGCGGTCATC
ATCATCATCGCCACGGGCCTGGCGCTGGCGTTTGGCGACACATCGGGCGGCTTCCGCAAGCTGATCCAGATTGTGTTCGG
CCTGTCCATCGCGTTCGCGGCTTCGAGCTTCTTCCTGTCGTTCTTCAGCTTCTCCGGCGGGGCGGTTGTATGA

Upstream 100 bases:

>100_bases
CGGACGCGCTGGAAACGCCGTTTCCCGAGCTGACGCCGGTTCCTCTTGCAGCCAATGCCGCTGCGCCTTCCCCGTCCCTT
GACCAACCTGGAGAACTGCC

Downstream 100 bases:

>100_bases
GCGGGCCGGACAGCTTCGCGGCCGGCTTCGAGGTGCCGCTACATCGCTCGCTCACCGAGCCGATCCTCATGGGCGGCGCA
CCGCGCACCGTGGCAATTGC

Product: conjugal transfer TrbC transmembrane protein

Products: NA

Alternate protein names: Conjugal Transfer Protein; Conjugal Transfer Protein Trbc; TrbC-Like Protein; Conjugative Transfer Protein TrbC; Conjugal Transfer Protein TRBC; Type IV Secretory Pathway VirB2 Component; Conjugal Transfer TrbC Transmembrane Protein

Number of amino acids: Translated: 130; Mature: 129

Protein sequence:

>130_residues
MTQMHVPAFRFSVNPIPRVSSLAWLRSLARPAGQGLLLAALLLFIAGTAQAAGSSMPWEGPLQSILESIQGPVARIVAVI
IIIATGLALAFGDTSGGFRKLIQIVFGLSIAFAASSFFLSFFSFSGGAVV

Sequences:

>Translated_130_residues
MTQMHVPAFRFSVNPIPRVSSLAWLRSLARPAGQGLLLAALLLFIAGTAQAAGSSMPWEGPLQSILESIQGPVARIVAVI
IIIATGLALAFGDTSGGFRKLIQIVFGLSIAFAASSFFLSFFSFSGGAVV
>Mature_129_residues
TQMHVPAFRFSVNPIPRVSSLAWLRSLARPAGQGLLLAALLLFIAGTAQAAGSSMPWEGPLQSILESIQGPVARIVAVII
IIATGLALAFGDTSGGFRKLIQIVFGLSIAFAASSFFLSFFSFSGGAVV

Specific function: Unknown

COG id: COG3838

COG function: function code U; Type IV secretory pathway, VirB2 components (pilins)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13552; Mature: 13421

Theoretical pI: Translated: 12.21; Mature: 12.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQMHVPAFRFSVNPIPRVSSLAWLRSLARPAGQGLLLAALLLFIAGTAQAAGSSMPWEG
CCCCCCCHHEECCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCC
PLQSILESIQGPVARIVAVIIIIATGLALAFGDTSGGFRKLIQIVFGLSIAFAASSFFLS
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
FFSFSGGAVV
HHHCCCCCCC
>Mature Secondary Structure 
TQMHVPAFRFSVNPIPRVSSLAWLRSLARPAGQGLLLAALLLFIAGTAQAAGSSMPWEG
CCCCCCHHEECCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCC
PLQSILESIQGPVARIVAVIIIIATGLALAFGDTSGGFRKLIQIVFGLSIAFAASSFFLS
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
FFSFSGGAVV
HHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA