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The map label for this gene is 17547169

Identifier: 17547169

GI number: 17547169

Start: 2655507

End: 2656703

Strand: Reverse

Name: 17547169

Synonym: RSc2450

Alternate gene names: NA

Gene position: 2656703-2655507 (Counterclockwise)

Preceding gene: 17547170

Following gene: 17547168

Centisome position: 71.49

GC content: 63.32

Gene sequence:

>1197_bases
ATGAACTTGATCGACTCCTTTCTGAGTTTCCTTGCCAACGGCACCCTGAACTGGGCCTGGTGGCAGATCCTGATTTTCAC
GCTGGTGGTGACGCACATGACCATCGCCAGCGTCACGATTTTCCTGCATCGTTGCCAGGCGCACCGCGCGCTCGACCTGC
ACCCGGCCGCTGCCCACGTTTTCCGCTTCTGGCTCTGGCTGACCACCGGCATGGTCACCAAGGAGTGGGCCGCCATCCAC
CGCAAGCATCACGCCAAGTGCGAGACCGAAGAGGACCCGCACAGCCCGCAGACGCGCGGCATCCGCAAGGTGCTGCTGGA
AGGCGCCGAGCTGTACCGCGCCGAGGCCAAGAACCGCGAGACCATCCAGAAATTCGGTCACGGCACCCCGAACGACTGGA
TCGAGCAGAACCTCTATTCCAAGTACACCTGGCAGGGCGTCGGCCTGATGCTGATCCTCGACGTGCTGATGTTCGGCACG
CTTGGCCTGACCGTGTGGGCGGTGCAGATGCTGTGGATTCCGATTCATGCCGCCGGCATCATCAACGGGCTGGGCCACTA
CTGGGGCTACCGCAACTTTGATTGCGAAGATGCGTCGACCAACGTGTTCCCGTGGGGCCTGATCATCGGCGGCGAAGAGC
TGCACAACAATCACCACACCTACGCCACGTCGGCCAAGTTCTCGATCAAGTGGTATGAGTTCGACGTGGGCTGGGGCTAC
ATCCGTGCGCTGGAGATGGTGGGCCTGGCCAAGGTCAAGAAGGTGGCGCCCAAGGCACGCTTCGGCGACGTCAAGCCGGT
TGACCAGAACACGCTGGAAGCGATCATCGCCAACCGCTACGACGTGATGGCCCGCTATGCCAAGACCGTCAAGGTCGCCT
ATCGCCAGGAGCTGGCCAAGCTGAAGGACGCCCGCGACGTGGAATACCGCGCGCTGAAGCCGGCCCGCAAGTGGTTCCAT
CGCGATGAGGCCAAGCTGGGTGCGCCTCAGCGTGAGCAGCTGTCGCAGATCGTGTCGGACCATTCCGCGCTGCACACCTT
CGTCGAGATGCGTCGCGACCTGGGCGCGCTGTGGGGCCGCTCGAACGCCACGCGCGAACAACTGCTGCACCAGCTGCAGG
AATGGTGCAAGCGGGCGGAGGAAAGCGGCATCCATGCGCTGCAGGAATTCGCCGTGCGCCTGCGCCGGTACGCCTGA

Upstream 100 bases:

>100_bases
ACCACCCCCGATGTTGCCGCCAGGCGACACAAGTGGCCCGATGACGCAGCACCGTCAATTCTGACCAGGCTGCTTCGATG
ACCCCGAGTTGACCACGGAG

Downstream 100 bases:

>100_bases
TCTTGCTGCTTCAATGATGAAGCCCCGCTGCGCAGCGGGGCTTTTCTTTTGGGTAAACTTCCTCCATTCATTCTCTTAAC
AAGGCGCGACCAAGCAGCGC

Product: stearoyl-CoA desaturase oxidoreductase

Products: NA

Alternate protein names: Stearoyl-CoA 9-Desaturase; Delta-9 Acyl-Phospholipid Desaturase; Fatty-Acid Desaturase; Delta-9 Desaturase; Fatty Acid Desaturase Subfamily; Fatty Acid Desaturase Family Protein; Stearoyl-CoA Desaturase; Delta 9 Acyl-Lipid Fatty Acid Desaturase; Acyl-CoA Desaturase; Delta-9 Acyl-Lipid Desaturase; Palmitoyl-Monogalactosyldiacylglycerol Delta-7 Desaturase; Stearoyl-CoA Desaturase Oxidoreductase; Fatty-Acid Desaturase Transmenbrane Protein; Delta-9 Fatty Ac Id Desaturase; Transmembrane Fatty Acid Desaturase; Syn-2 Delta 9 Acyl-Lipid Fatty Acid Desaturase; Desaturase-Like; Stearoyl-CoA-9-Desaturase; Delta 9 Acyl-Lipid Desaturase; Stearoyl-CoA Desaturase Oxidoreductase Protein; Fatty Acid Desaturase Family

Number of amino acids: Translated: 398; Mature: 398

Protein sequence:

>398_residues
MNLIDSFLSFLANGTLNWAWWQILIFTLVVTHMTIASVTIFLHRCQAHRALDLHPAAAHVFRFWLWLTTGMVTKEWAAIH
RKHHAKCETEEDPHSPQTRGIRKVLLEGAELYRAEAKNRETIQKFGHGTPNDWIEQNLYSKYTWQGVGLMLILDVLMFGT
LGLTVWAVQMLWIPIHAAGIINGLGHYWGYRNFDCEDASTNVFPWGLIIGGEELHNNHHTYATSAKFSIKWYEFDVGWGY
IRALEMVGLAKVKKVAPKARFGDVKPVDQNTLEAIIANRYDVMARYAKTVKVAYRQELAKLKDARDVEYRALKPARKWFH
RDEAKLGAPQREQLSQIVSDHSALHTFVEMRRDLGALWGRSNATREQLLHQLQEWCKRAEESGIHALQEFAVRLRRYA

Sequences:

>Translated_398_residues
MNLIDSFLSFLANGTLNWAWWQILIFTLVVTHMTIASVTIFLHRCQAHRALDLHPAAAHVFRFWLWLTTGMVTKEWAAIH
RKHHAKCETEEDPHSPQTRGIRKVLLEGAELYRAEAKNRETIQKFGHGTPNDWIEQNLYSKYTWQGVGLMLILDVLMFGT
LGLTVWAVQMLWIPIHAAGIINGLGHYWGYRNFDCEDASTNVFPWGLIIGGEELHNNHHTYATSAKFSIKWYEFDVGWGY
IRALEMVGLAKVKKVAPKARFGDVKPVDQNTLEAIIANRYDVMARYAKTVKVAYRQELAKLKDARDVEYRALKPARKWFH
RDEAKLGAPQREQLSQIVSDHSALHTFVEMRRDLGALWGRSNATREQLLHQLQEWCKRAEESGIHALQEFAVRLRRYA
>Mature_398_residues
MNLIDSFLSFLANGTLNWAWWQILIFTLVVTHMTIASVTIFLHRCQAHRALDLHPAAAHVFRFWLWLTTGMVTKEWAAIH
RKHHAKCETEEDPHSPQTRGIRKVLLEGAELYRAEAKNRETIQKFGHGTPNDWIEQNLYSKYTWQGVGLMLILDVLMFGT
LGLTVWAVQMLWIPIHAAGIINGLGHYWGYRNFDCEDASTNVFPWGLIIGGEELHNNHHTYATSAKFSIKWYEFDVGWGY
IRALEMVGLAKVKKVAPKARFGDVKPVDQNTLEAIIANRYDVMARYAKTVKVAYRQELAKLKDARDVEYRALKPARKWFH
RDEAKLGAPQREQLSQIVSDHSALHTFVEMRRDLGALWGRSNATREQLLHQLQEWCKRAEESGIHALQEFAVRLRRYA

Specific function: Unknown

COG id: COG1398

COG function: function code I; Fatty-acid desaturase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Saccharomyces cerevisiae, GI6321383, Length=263, Percent_Identity=23.574144486692, Blast_Score=64, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45997; Mature: 45997

Theoretical pI: Translated: 9.48; Mature: 9.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLIDSFLSFLANGTLNWAWWQILIFTLVVTHMTIASVTIFLHRCQAHRALDLHPAAAHV
CCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
FRFWLWLTTGMVTKEWAAIHRKHHAKCETEEDPHSPQTRGIRKVLLEGAELYRAEAKNRE
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHH
TIQKFGHGTPNDWIEQNLYSKYTWQGVGLMLILDVLMFGTLGLTVWAVQMLWIPIHAAGI
HHHHHCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
INGLGHYWGYRNFDCEDASTNVFPWGLIIGGEELHNNHHTYATSAKFSIKWYEFDVGWGY
HHHHHHHCCCCCCCCCCCCCCCCCEEEEECCHHHHCCCCCEEECCEEEEEEEEEECCHHH
IRALEMVGLAKVKKVAPKARFGDVKPVDQNTLEAIIANRYDVMARYAKTVKVAYRQELAK
HHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LKDARDVEYRALKPARKWFHRDEAKLGAPQREQLSQIVSDHSALHTFVEMRRDLGALWGR
HHCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
SNATREQLLHQLQEWCKRAEESGIHALQEFAVRLRRYA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNLIDSFLSFLANGTLNWAWWQILIFTLVVTHMTIASVTIFLHRCQAHRALDLHPAAAHV
CCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
FRFWLWLTTGMVTKEWAAIHRKHHAKCETEEDPHSPQTRGIRKVLLEGAELYRAEAKNRE
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHH
TIQKFGHGTPNDWIEQNLYSKYTWQGVGLMLILDVLMFGTLGLTVWAVQMLWIPIHAAGI
HHHHHCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
INGLGHYWGYRNFDCEDASTNVFPWGLIIGGEELHNNHHTYATSAKFSIKWYEFDVGWGY
HHHHHHHCCCCCCCCCCCCCCCCCEEEEECCHHHHCCCCCEEECCEEEEEEEEEECCHHH
IRALEMVGLAKVKKVAPKARFGDVKPVDQNTLEAIIANRYDVMARYAKTVKVAYRQELAK
HHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LKDARDVEYRALKPARKWFHRDEAKLGAPQREQLSQIVSDHSALHTFVEMRRDLGALWGR
HHCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
SNATREQLLHQLQEWCKRAEESGIHALQEFAVRLRRYA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA