| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
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The map label for this gene is 17547155
Identifier: 17547155
GI number: 17547155
Start: 2642628
End: 2643125
Strand: Direct
Name: 17547155
Synonym: RSc2436
Alternate gene names: NA
Gene position: 2642628-2643125 (Clockwise)
Preceding gene: 17547154
Following gene: 17547163
Centisome position: 71.11
GC content: 68.27
Gene sequence:
>498_bases ATGGCCGTGACGCACGCAGTTCCGGCCACGGGGATCGTTTTGTCCGACGATCCCGCGTGGCTCCCGCTGGACCAGATCTA CCGCTTTCTCTCGCAGGAAACGTATTGGGCCCGCGGCCTGCCACGCGCAGTGTTCGACCGATCGATCGCCCATTCGCTGT GCCTCGCGGCCTACCGCCTGAATGACGACGGCACGCACGGCGAGCTGGCGGGCTTCGCCCGGGTCATTTCGGACCACGCA ACCTTCGCCTACCTGTGCGACGTCTTCGTGCTGCCCGAGTGGCGCGGCAAGGGCATCTCGCACGCGCTGATGCGCTTGCT GCGCGAGCACCCCGAACTGCAGGGGCTGCGCCGCACGGTGCTGGTCACCACCGATGCCGACGGGCTCTACCGCAAGCACG GCTTTACCGACGTGCCCGGTGGCAGCGGCTTCATGCAGCTGCACCGGCCCAATGCCTATCAGGCGGCGGGCGACCCGGCG CAGACCGCTTCGGCCTGA
Upstream 100 bases:
>100_bases TGCGCACGCTGCTCAAGGCACACGGCTGAGCTTCAACGCTTCACCCCGGGCGGCGCGCGCGGCGCCGCCCTCCATCGCTG TTCCCAACCCGAGGTTTGCC
Downstream 100 bases:
>100_bases CGCCCAAAGAAAAAGCCTCGCTTGTCGCGAGGCTTTTTCCAGGGTGCTACGCAGAAGTTATTCGCCCAGATAGGCGGCGC GCACCTTCGGATCGTCCAGC
Product: hypothetical protein
Products: NA
Alternate protein names: Acetyltransferase; Acetyltransferase GNAT Family; GNAT Family Acetyltransferase; Histone Acetyltransferase HPA2-Like Acetyltransferase; Acetyltransferase Family Protein; GCN5-Like N-Acetyltransferase; Gcn5-Related N-Acetyltransferase; GCN5-Related N-Acetyltransferase Protein; Histone Acetyltransferase HPA2/Related Acetyltransferase; Acetyltransferase Domain-Containing Protein; N-Acetylglutamate Synthase; Acetyltransferase GNAT Family Protein; GCN5 N-Acetyltransferase; Acetyltransferase GCN5-Related; Acetyltransferase Gnat Family; Spermine/Spermidine Acetyltransferase; N-Acetyltransferase Gnat Family Protein; GCN5-Related Protein N-Acetyltransferase
Number of amino acids: Translated: 165; Mature: 164
Protein sequence:
>165_residues MAVTHAVPATGIVLSDDPAWLPLDQIYRFLSQETYWARGLPRAVFDRSIAHSLCLAAYRLNDDGTHGELAGFARVISDHA TFAYLCDVFVLPEWRGKGISHALMRLLREHPELQGLRRTVLVTTDADGLYRKHGFTDVPGGSGFMQLHRPNAYQAAGDPA QTASA
Sequences:
>Translated_165_residues MAVTHAVPATGIVLSDDPAWLPLDQIYRFLSQETYWARGLPRAVFDRSIAHSLCLAAYRLNDDGTHGELAGFARVISDHA TFAYLCDVFVLPEWRGKGISHALMRLLREHPELQGLRRTVLVTTDADGLYRKHGFTDVPGGSGFMQLHRPNAYQAAGDPA QTASA >Mature_164_residues AVTHAVPATGIVLSDDPAWLPLDQIYRFLSQETYWARGLPRAVFDRSIAHSLCLAAYRLNDDGTHGELAGFARVISDHAT FAYLCDVFVLPEWRGKGISHALMRLLREHPELQGLRRTVLVTTDADGLYRKHGFTDVPGGSGFMQLHRPNAYQAAGDPAQ TASA
Specific function: Unknown
COG id: COG0454
COG function: function code KR; Histone acetyltransferase HPA2 and related acetyltransferases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18174; Mature: 18043
Theoretical pI: Translated: 6.96; Mature: 6.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVTHAVPATGIVLSDDPAWLPLDQIYRFLSQETYWARGLPRAVFDRSIAHSLCLAAYRL CCCCCCCCCCCEEECCCCCCCCHHHHHHHHCCCCHHHCCCCHHHHHHHHHHHHHHHHHCC NDDGTHGELAGFARVISDHATFAYLCDVFVLPEWRGKGISHALMRLLREHPELQGLRRTV CCCCCCHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCHHHCCCEEE LVTTDADGLYRKHGFTDVPGGSGFMQLHRPNAYQAAGDPAQTASA EEEECCCCHHHHCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCC >Mature Secondary Structure AVTHAVPATGIVLSDDPAWLPLDQIYRFLSQETYWARGLPRAVFDRSIAHSLCLAAYRL CCCCCCCCCCEEECCCCCCCCHHHHHHHHCCCCHHHCCCCHHHHHHHHHHHHHHHHHCC NDDGTHGELAGFARVISDHATFAYLCDVFVLPEWRGKGISHALMRLLREHPELQGLRRTV CCCCCCHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCHHHCCCEEE LVTTDADGLYRKHGFTDVPGGSGFMQLHRPNAYQAAGDPAQTASA EEEECCCCHHHHCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA