Click here to switch to the map view.

The map label for this gene is 17547132

Identifier: 17547132

GI number: 17547132

Start: 2618534

End: 2618965

Strand: Reverse

Name: 17547132

Synonym: RSc2413

Alternate gene names: NA

Gene position: 2618965-2618534 (Counterclockwise)

Preceding gene: 17547133

Following gene: 17547130

Centisome position: 70.47

GC content: 73.15

Gene sequence:

>432_bases
ATGACTCCCGATGGCCGTAATCCCGGACCCAACGCGGACAACAACATCCCCGTCCTGACGGAGATCGTCGAGCTCGAGAC
GCAGGTGCCGGCGCAAGCGCCGCCCGTCCAGGCGCCGCCGCCCCATGCGGCTGCCGCAGCCACCATCGTGCCGCCGGCGC
TGCGCGAGCAGGGCCTCGCGCCCACGCCTGCCTTGCCGCCCGCCGGCACCGACGCTGCCCGCGTGATGGGCGAGGTGATG
TGGCGTTTCCAGTCCGAATGGCCGGCGCTGATCGAGGCACAATGCCGCGCCGCGCTGGAATCGCGCCTGTCCCTGCTGAC
CGAGCAGCTCGCCGCTGACCTGACGCGCACCCTCGAAGCGCGCCTGATGGACTGGCTGGGCGCCGCGCTGGACGACGCAC
TGGCGCCCCAGCGCAGGACCCCGCCGCGCTAG

Upstream 100 bases:

>100_bases
TCGTCGGCGACGACGAGGCCGAGCGCGCCGCCGCCCGCGACCGCTTCCGCTTCTATCGCGACCGCGGCTATCCGATCCAA
CATCACGACGTGGGGCGCGC

Downstream 100 bases:

>100_bases
CGTCGGCACGGATCGCGAGCCCATGAAAAAACCCGCCGGATGGCGGGTTTTTCGTTTTGGAGCGCGGCAACGGCGCGGGG
TCAGTCCGTGACGGCGCCCT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 143; Mature: 142

Protein sequence:

>143_residues
MTPDGRNPGPNADNNIPVLTEIVELETQVPAQAPPVQAPPPHAAAAATIVPPALREQGLAPTPALPPAGTDAARVMGEVM
WRFQSEWPALIEAQCRAALESRLSLLTEQLAADLTRTLEARLMDWLGAALDDALAPQRRTPPR

Sequences:

>Translated_143_residues
MTPDGRNPGPNADNNIPVLTEIVELETQVPAQAPPVQAPPPHAAAAATIVPPALREQGLAPTPALPPAGTDAARVMGEVM
WRFQSEWPALIEAQCRAALESRLSLLTEQLAADLTRTLEARLMDWLGAALDDALAPQRRTPPR
>Mature_142_residues
TPDGRNPGPNADNNIPVLTEIVELETQVPAQAPPVQAPPPHAAAAATIVPPALREQGLAPTPALPPAGTDAARVMGEVMW
RFQSEWPALIEAQCRAALESRLSLLTEQLAADLTRTLEARLMDWLGAALDDALAPQRRTPPR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15261; Mature: 15129

Theoretical pI: Translated: 4.42; Mature: 4.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPDGRNPGPNADNNIPVLTEIVELETQVPAQAPPVQAPPPHAAAAATIVPPALREQGLA
CCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCHHHHHCCCC
PTPALPPAGTDAARVMGEVMWRFQSEWPALIEAQCRAALESRLSLLTEQLAADLTRTLEA
CCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RLMDWLGAALDDALAPQRRTPPR
HHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
TPDGRNPGPNADNNIPVLTEIVELETQVPAQAPPVQAPPPHAAAAATIVPPALREQGLA
CCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCHHHHHCCCC
PTPALPPAGTDAARVMGEVMWRFQSEWPALIEAQCRAALESRLSLLTEQLAADLTRTLEA
CCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RLMDWLGAALDDALAPQRRTPPR
HHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA