| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
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The map label for this gene is 17547005
Identifier: 17547005
GI number: 17547005
Start: 2479487
End: 2480440
Strand: Direct
Name: 17547005
Synonym: RSc2286
Alternate gene names: NA
Gene position: 2479487-2480440 (Clockwise)
Preceding gene: 17547004
Following gene: 17547008
Centisome position: 66.72
GC content: 69.6
Gene sequence:
>954_bases ATGAGCCTGACCGGACATTCCATCGAAAGCCTCGCGACCGAACCCGGCCTGATCTCCCATGGCACGGATCACGAAGAGAC CGATGCCGCGCTGCTCGAGCGCGTCCACGCACGGCTGCGGGCCGCGGGTGACGTGCCGGGCGCGACGGTCCAGCACATGC TGTCGCTGGCCGACGCGCTGGCGAGCTTCGGCCTCGGACGCTTCCTGCTGCGCCACCAGGGCCTGAATGCGTACTGGACC CACCAGTTGGTGACCTACCAGCCCGGCACCTTGCCGGCCAGCAGCGCAGAGACGCTCGAATACCAGATGTTCGAAAAGCT GCCCGTCGTGCTGGCCACGCGAGAGCGCTTCGGCATCTTCCGCAGCCAGCTGCAGGCCCTGATGAAACCGGGCGCCACCG CCGCCTCGGTGCCGTGCGGCTTGATGGGCGAGCTGCTGCTGCTCGACTACAGCAGCCTGCCCGGCGTCTCCCTGATCGGC GTGGACCTGGACCAGGACGCGCTGGACAGTGCCCGCGCGCTCGCCGCGACGCGCGGCCTGACCGAGCGCGTCTCGCTGCA CCGCCAGGACGCTTGGGCGCTCGACCTGCGCGCCAGCGTCGACGTCCTGGCCAGCAACGGACTGAACCTCTATGAGCCCG ACGACGGCCGCGTGACCGAGCTGTACTGTGCCTACCGCGACGCCCTGCGCCCCGGCGGCACCCTGGTCACCAGCTTCCTG ACCCCGCCGCCCGCGCTATCGCCCGCGTCCCCCTGGAACATGGAGGCGACCGACCCGAAGGCGCTGTCGCTGCAAGCCCT GCTGTTCGTCAAGATCATCGAGGCGAAATGGCAGACCTTCCGCACGCACGCGCAGACGACGGCGCAGCTGCAGCGCGCGG GCTTCGTCAACATCCGCTTCATCGACGACCGGGCGCGCATGTTCCCGACCGTGATCGCGCAGCGGCCCCGTTGA
Upstream 100 bases:
>100_bases CCTGTCGGCGGCACCACCGGCAGGCGCTTCGCCCGCAAGCGGGCGCGCCTGCGGCCGCCGGACATTCCAACACCACGATG CCGTTCCCGCGCCTCACGAC
Downstream 100 bases:
>100_bases ATGGCCGCAGGGGGCGTTTGAGCACGCCCGGCCGGCGCAAGCGCCGGTCGCTGCCCGGTTGCCGGAAGGACCGGGCCGGC GCGGTCGGGGCAACCGGTTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 317; Mature: 316
Protein sequence:
>317_residues MSLTGHSIESLATEPGLISHGTDHEETDAALLERVHARLRAAGDVPGATVQHMLSLADALASFGLGRFLLRHQGLNAYWT HQLVTYQPGTLPASSAETLEYQMFEKLPVVLATRERFGIFRSQLQALMKPGATAASVPCGLMGELLLLDYSSLPGVSLIG VDLDQDALDSARALAATRGLTERVSLHRQDAWALDLRASVDVLASNGLNLYEPDDGRVTELYCAYRDALRPGGTLVTSFL TPPPALSPASPWNMEATDPKALSLQALLFVKIIEAKWQTFRTHAQTTAQLQRAGFVNIRFIDDRARMFPTVIAQRPR
Sequences:
>Translated_317_residues MSLTGHSIESLATEPGLISHGTDHEETDAALLERVHARLRAAGDVPGATVQHMLSLADALASFGLGRFLLRHQGLNAYWT HQLVTYQPGTLPASSAETLEYQMFEKLPVVLATRERFGIFRSQLQALMKPGATAASVPCGLMGELLLLDYSSLPGVSLIG VDLDQDALDSARALAATRGLTERVSLHRQDAWALDLRASVDVLASNGLNLYEPDDGRVTELYCAYRDALRPGGTLVTSFL TPPPALSPASPWNMEATDPKALSLQALLFVKIIEAKWQTFRTHAQTTAQLQRAGFVNIRFIDDRARMFPTVIAQRPR >Mature_316_residues SLTGHSIESLATEPGLISHGTDHEETDAALLERVHARLRAAGDVPGATVQHMLSLADALASFGLGRFLLRHQGLNAYWTH QLVTYQPGTLPASSAETLEYQMFEKLPVVLATRERFGIFRSQLQALMKPGATAASVPCGLMGELLLLDYSSLPGVSLIGV DLDQDALDSARALAATRGLTERVSLHRQDAWALDLRASVDVLASNGLNLYEPDDGRVTELYCAYRDALRPGGTLVTSFLT PPPALSPASPWNMEATDPKALSLQALLFVKIIEAKWQTFRTHAQTTAQLQRAGFVNIRFIDDRARMFPTVIAQRPR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34583; Mature: 34452
Theoretical pI: Translated: 6.42; Mature: 6.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLTGHSIESLATEPGLISHGTDHEETDAALLERVHARLRAAGDVPGATVQHMLSLADAL CCCCCCCHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH ASFGLGRFLLRHQGLNAYWTHQLVTYQPGTLPASSAETLEYQMFEKLPVVLATRERFGIF HHHHHHHHHHHHCCCCEEEEEEEEEECCCCCCCCCHHHHHHHHHHHCCHHEECHHHHHHH RSQLQALMKPGATAASVPCGLMGELLLLDYSSLPGVSLIGVDLDQDALDSARALAATRGL HHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHHHHHCH TERVSLHRQDAWALDLRASVDVLASNGLNLYEPDDGRVTELYCAYRDALRPGGTLVTSFL HHHHHHHCCCCEEEEHHHHHHHHHCCCCEEECCCCCCCHHHHHHHHHHCCCCCCEEEECC TPPPALSPASPWNMEATDPKALSLQALLFVKIIEAKWQTFRTHAQTTAQLQRAGFVNIRF CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEE IDDRARMFPTVIAQRPR ECCHHHHHHHHHCCCCC >Mature Secondary Structure SLTGHSIESLATEPGLISHGTDHEETDAALLERVHARLRAAGDVPGATVQHMLSLADAL CCCCCCHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH ASFGLGRFLLRHQGLNAYWTHQLVTYQPGTLPASSAETLEYQMFEKLPVVLATRERFGIF HHHHHHHHHHHHCCCCEEEEEEEEEECCCCCCCCCHHHHHHHHHHHCCHHEECHHHHHHH RSQLQALMKPGATAASVPCGLMGELLLLDYSSLPGVSLIGVDLDQDALDSARALAATRGL HHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHHHHHCH TERVSLHRQDAWALDLRASVDVLASNGLNLYEPDDGRVTELYCAYRDALRPGGTLVTSFL HHHHHHHCCCCEEEEHHHHHHHHHCCCCEEECCCCCCCHHHHHHHHHHCCCCCCEEEECC TPPPALSPASPWNMEATDPKALSLQALLFVKIIEAKWQTFRTHAQTTAQLQRAGFVNIRF CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEE IDDRARMFPTVIAQRPR ECCHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA