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The map label for this gene is 17547004

Identifier: 17547004

GI number: 17547004

Start: 2478916

End: 2479347

Strand: Direct

Name: 17547004

Synonym: RSc2285

Alternate gene names: NA

Gene position: 2478916-2479347 (Clockwise)

Preceding gene: 17547003

Following gene: 17547005

Centisome position: 66.7

GC content: 66.9

Gene sequence:

>432_bases
ATGAAACCGATCGCATGTCTCTTCGCCGCCTTCGCCGCCCTGCCGGTGCTCGCGCATGCCCAGACCGTTCAGATGCCCGA
CGTCCTGGCCGCCGAGCATGCGCTGTCCCTCGGCAAGCCGGTGACCGCCACCATCGACCTGACCCGTTGCACCGGCGACA
CCGCCACCACCCCGGCAGGCACGACGCGCGGCGGCGTGACCGTGAATCCGTACCGGATCCAGCCGGACAACACCCTGAGC
TTCTCCGACACGCACTTCACCGTGCGCAGCGACGGCACGCCGATCACGCAATTCCTGCGCTACTCCATCGACACCAGCGG
CACGGCGCGCTTTTCGTCGTACATCTTCGCCATGCCGGCCTACACGCTGCAGAGCCAGGTGTCCTACACCTGCAAGCTGG
GCGAGGGCGTGAAGCTGTTCGCCCGGTTCTGA

Upstream 100 bases:

>100_bases
CTTCGCAAAAACGCGCGCCATCCCCGGGGGGCCCGGCTTCGGCAGCGGGTCCCTTTCGTTGACCTCAGCCTCCCTTGAAC
CGCACATGGCCCAGACGAAT

Downstream 100 bases:

>100_bases
CCGGCACGCAACCCCGGCGTCCGGCCCGAACCGGCGCATCCTGTCGGCGGCACCACCGGCAGGCGCTTCGCCCGCAAGCG
GGCGCGCCTGCGGCCGCCGG

Product: signal peptide protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 143; Mature: 143

Protein sequence:

>143_residues
MKPIACLFAAFAALPVLAHAQTVQMPDVLAAEHALSLGKPVTATIDLTRCTGDTATTPAGTTRGGVTVNPYRIQPDNTLS
FSDTHFTVRSDGTPITQFLRYSIDTSGTARFSSYIFAMPAYTLQSQVSYTCKLGEGVKLFARF

Sequences:

>Translated_143_residues
MKPIACLFAAFAALPVLAHAQTVQMPDVLAAEHALSLGKPVTATIDLTRCTGDTATTPAGTTRGGVTVNPYRIQPDNTLS
FSDTHFTVRSDGTPITQFLRYSIDTSGTARFSSYIFAMPAYTLQSQVSYTCKLGEGVKLFARF
>Mature_143_residues
MKPIACLFAAFAALPVLAHAQTVQMPDVLAAEHALSLGKPVTATIDLTRCTGDTATTPAGTTRGGVTVNPYRIQPDNTLS
FSDTHFTVRSDGTPITQFLRYSIDTSGTARFSSYIFAMPAYTLQSQVSYTCKLGEGVKLFARF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010694 [H]

Pfam domain/function: PF06903 VirK [H]

EC number: NA

Molecular weight: Translated: 15358; Mature: 15358

Theoretical pI: Translated: 8.48; Mature: 8.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPIACLFAAFAALPVLAHAQTVQMPDVLAAEHALSLGKPVTATIDLTRCTGDTATTPAG
CCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCEEEEEEEEEECCCCCCCCCC
TTRGGVTVNPYRIQPDNTLSFSDTHFTVRSDGTPITQFLRYSIDTSGTARFSSYIFAMPA
CCCCCEEECCEEECCCCEEEECCCEEEEECCCCCHHHHHHHHCCCCCCHHHHHEEEECCC
YTLQSQVSYTCKLGEGVKLFARF
HHHHCCCEEEEECCCCEEEEEEC
>Mature Secondary Structure
MKPIACLFAAFAALPVLAHAQTVQMPDVLAAEHALSLGKPVTATIDLTRCTGDTATTPAG
CCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCEEEEEEEEEECCCCCCCCCC
TTRGGVTVNPYRIQPDNTLSFSDTHFTVRSDGTPITQFLRYSIDTSGTARFSSYIFAMPA
CCCCCEEECCEEECCCCEEEECCCEEEEECCCCCHHHHHHHHCCCCCCHHHHHEEEECCC
YTLQSQVSYTCKLGEGVKLFARF
HHHHCCCEEEEECCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]