Click here to switch to the map view.

The map label for this gene is yhiN [H]

Identifier: 17546937

GI number: 17546937

Start: 2405034

End: 2406272

Strand: Reverse

Name: yhiN [H]

Synonym: RSc2218

Alternate gene names: 17546937

Gene position: 2406272-2405034 (Counterclockwise)

Preceding gene: 17546939

Following gene: 17546936

Centisome position: 64.75

GC content: 70.78

Gene sequence:

>1239_bases
ATGATGCGGTGCGATGTAGCGGTGATCGGCGCGGGCGCGGCCGGGATGATGTGCGCGGCGGTGGCCGGGCAGCGGGGCGC
GCGCGTGGTGCTGATCGACCACGCCACGAAGCTCGCCGAGAAGATCCGCATCTCCGGCGGCGGGCGCTGCAATTTCACGA
ACCGCAATGCGGGGCCGGCCAACTACCTGTCGAACAACCCGCATTTCTGCCGCTCGGCGCTGGCGCGCTACACGCCGCAG
GACTTCATCGGGCTGGTTTCCGGCTACCGCATTCCCTATCACGAGAAGCACAAGGGCCAGCTGTTCTGCGACGACAGCGC
GGAAGACATCATCCGCATGCTCGAAGCCGAGTGCGACAAGGGCAACGTCCTCTGGCGCGCCGGCTGCGCCATCGCCGAGG
TCGGCAAGGCCGGCGATGCCTACCGCCTGGCCACCAGCGCCGGCGAGATCGTCGCCGACAAGCTGGTGATCGCCACCGGC
GGGCTGTCCATCCCCAAGATCGGCGCGACGGATTTCGGTTACCGCATCGCCCGCCAGTTCGGCCTGAAGATCGTCGAGAC
CCATCCGGCACTGGTGCCGCTGACCTTCCAGTCCGAGCATTGGGCGCCGTTCGCCGCGCTGTCGGGCGTGTCGATGGAGG
TGGACGTGACGGTCGCGCCGGCGGCGGCTGCCGGCAAGGCGGGCCATCGGGGCAACCGGGGCGGCGCCACGACGTTCCGT
GAAGACCTGCTGCTGACGCATCGCGGCCTGTCCGGCCCGGCCGTCCTGCAGATTTCCAGCTTCTGGAGCGCCGGGCAGCC
GCTGTCGATCGACCTGCTGCCCGACACCGATGCCGCGCAATGGCTGTGCGGCGAGAAGGCCGGTTCGCGCAAGCAGTTGG
GGACGGTGCTGGCGCAGCGCCTGCCGGAGCGCGTCGCGCAGGCGTGGTGTGCCACCCATGGCGCCAGCCCGCACGCGCCC
ATCGCCGAGCTGTCCGACAAAGTGCTGCGGACCCTGGGCTGCGCGCTCAACCGCTGGGCGCTGACGCCATCCGGCAGCGA
GGGCTACCGGAAGGCCGAGGTCACCCGCGGCGGGGTCGACACGCGGGCGCTGTCGTCCGCCACGATGGAGGCGCAGGCCG
CGCCCGGACTGCACTTCATCGGCGAGGTGGTCGATGTGACGGGCTGGCTGGGCGGCTACAACTTCCAGTGGGCCTGGGCT
TCCGCCGTGGCGGCCGGGCTGGCGGTGGCGGGCAGCTGA

Upstream 100 bases:

>100_bases
GAAGGCGTGAGGAAATGCAATGGGAAGGCCGCCGAAGATAGCACAAGTTAAAATGCGCGGTTTTCGTACAGACAGGCAAC
CAAGGGGCGGCGCGGCGATC

Downstream 100 bases:

>100_bases
ACGGACCCGGATTGCCCCGGTTCTGTGCTACGATCAATGATCCGCGTTGTTCCACGTTTGCAACCCGCTGGGCGTGCCGC
CCGAGCGGGTTTTGCCGTTT

Product: transmembrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 412; Mature: 412

Protein sequence:

>412_residues
MMRCDVAVIGAGAAGMMCAAVAGQRGARVVLIDHATKLAEKIRISGGGRCNFTNRNAGPANYLSNNPHFCRSALARYTPQ
DFIGLVSGYRIPYHEKHKGQLFCDDSAEDIIRMLEAECDKGNVLWRAGCAIAEVGKAGDAYRLATSAGEIVADKLVIATG
GLSIPKIGATDFGYRIARQFGLKIVETHPALVPLTFQSEHWAPFAALSGVSMEVDVTVAPAAAAGKAGHRGNRGGATTFR
EDLLLTHRGLSGPAVLQISSFWSAGQPLSIDLLPDTDAAQWLCGEKAGSRKQLGTVLAQRLPERVAQAWCATHGASPHAP
IAELSDKVLRTLGCALNRWALTPSGSEGYRKAEVTRGGVDTRALSSATMEAQAAPGLHFIGEVVDVTGWLGGYNFQWAWA
SAVAAGLAVAGS

Sequences:

>Translated_412_residues
MMRCDVAVIGAGAAGMMCAAVAGQRGARVVLIDHATKLAEKIRISGGGRCNFTNRNAGPANYLSNNPHFCRSALARYTPQ
DFIGLVSGYRIPYHEKHKGQLFCDDSAEDIIRMLEAECDKGNVLWRAGCAIAEVGKAGDAYRLATSAGEIVADKLVIATG
GLSIPKIGATDFGYRIARQFGLKIVETHPALVPLTFQSEHWAPFAALSGVSMEVDVTVAPAAAAGKAGHRGNRGGATTFR
EDLLLTHRGLSGPAVLQISSFWSAGQPLSIDLLPDTDAAQWLCGEKAGSRKQLGTVLAQRLPERVAQAWCATHGASPHAP
IAELSDKVLRTLGCALNRWALTPSGSEGYRKAEVTRGGVDTRALSSATMEAQAAPGLHFIGEVVDVTGWLGGYNFQWAWA
SAVAAGLAVAGS
>Mature_412_residues
MMRCDVAVIGAGAAGMMCAAVAGQRGARVVLIDHATKLAEKIRISGGGRCNFTNRNAGPANYLSNNPHFCRSALARYTPQ
DFIGLVSGYRIPYHEKHKGQLFCDDSAEDIIRMLEAECDKGNVLWRAGCAIAEVGKAGDAYRLATSAGEIVADKLVIATG
GLSIPKIGATDFGYRIARQFGLKIVETHPALVPLTFQSEHWAPFAALSGVSMEVDVTVAPAAAAGKAGHRGNRGGATTFR
EDLLLTHRGLSGPAVLQISSFWSAGQPLSIDLLPDTDAAQWLCGEKAGSRKQLGTVLAQRLPERVAQAWCATHGASPHAP
IAELSDKVLRTLGCALNRWALTPSGSEGYRKAEVTRGGVDTRALSSATMEAQAAPGLHFIGEVVDVTGWLGGYNFQWAWA
SAVAAGLAVAGS

Specific function: Unknown

COG id: COG2081

COG function: function code R; Predicted flavoproteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_0933 [H]

Homologues:

Organism=Escherichia coli, GI2367234, Length=405, Percent_Identity=50.6172839506173, Blast_Score=375, Evalue=1e-105,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004792
- InterPro:   IPR013027
- InterPro:   IPR023166 [H]

Pfam domain/function: PF03486 HI0933_like [H]

EC number: NA

Molecular weight: Translated: 43348; Mature: 43348

Theoretical pI: Translated: 8.27; Mature: 8.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMRCDVAVIGAGAAGMMCAAVAGQRGARVVLIDHATKLAEKIRISGGGRCNFTNRNAGPA
CCEEEEEEEECCHHHHHHHHHHCCCCCEEEEEECHHHHHHHHCCCCCCEEECCCCCCCCC
NYLSNNPHFCRSALARYTPQDFIGLVSGYRIPYHEKHKGQLFCDDSAEDIIRMLEAECDK
HHCCCCCHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCEEECCCHHHHHHHHHHCCCC
GNVLWRAGCAIAEVGKAGDAYRLATSAGEIVADKLVIATGGLSIPKIGATDFGYRIARQF
CCEEEECCCHHHHHCCCCCCEEEECCCCHHHHCEEEEEECCCCCCCCCCCHHHHHHHHHH
GLKIVETHPALVPLTFQSEHWAPFAALSGVSMEVDVTVAPAAAAGKAGHRGNRGGATTFR
CCEEEECCCCEEEEEECCCCCCCHHHHCCCEEEEEEEECCCHHCCCCCCCCCCCCCCHHH
EDLLLTHRGLSGPAVLQISSFWSAGQPLSIDLLPDTDAAQWLCGEKAGSRKQLGTVLAQR
HHHHHHHCCCCCCEEEEEECCCCCCCCEEEEECCCCCHHHHHHCCCCCCHHHHHHHHHHH
LPERVAQAWCATHGASPHAPIAELSDKVLRTLGCALNRWALTPSGSEGYRKAEVTRGGVD
HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCEECCCCCCCCCEEHHHCCCCCC
TRALSSATMEAQAAPGLHFIGEVVDVTGWLGGYNFQWAWASAVAAGLAVAGS
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MMRCDVAVIGAGAAGMMCAAVAGQRGARVVLIDHATKLAEKIRISGGGRCNFTNRNAGPA
CCEEEEEEEECCHHHHHHHHHHCCCCCEEEEEECHHHHHHHHCCCCCCEEECCCCCCCCC
NYLSNNPHFCRSALARYTPQDFIGLVSGYRIPYHEKHKGQLFCDDSAEDIIRMLEAECDK
HHCCCCCHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCEEECCCHHHHHHHHHHCCCC
GNVLWRAGCAIAEVGKAGDAYRLATSAGEIVADKLVIATGGLSIPKIGATDFGYRIARQF
CCEEEECCCHHHHHCCCCCCEEEECCCCHHHHCEEEEEECCCCCCCCCCCHHHHHHHHHH
GLKIVETHPALVPLTFQSEHWAPFAALSGVSMEVDVTVAPAAAAGKAGHRGNRGGATTFR
CCEEEECCCCEEEEEECCCCCCCHHHHCCCEEEEEEEECCCHHCCCCCCCCCCCCCCHHH
EDLLLTHRGLSGPAVLQISSFWSAGQPLSIDLLPDTDAAQWLCGEKAGSRKQLGTVLAQR
HHHHHHHCCCCCCEEEEEECCCCCCCCEEEEECCCCCHHHHHHCCCCCCHHHHHHHHHHH
LPERVAQAWCATHGASPHAPIAELSDKVLRTLGCALNRWALTPSGSEGYRKAEVTRGGVD
HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCEECCCCCCCCCEEHHHCCCCCC
TRALSSATMEAQAAPGLHFIGEVVDVTGWLGGYNFQWAWASAVAAGLAVAGS
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8041620; 9278503 [H]