| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
Click here to switch to the map view.
The map label for this gene is yqeY [H]
Identifier: 17546936
GI number: 17546936
Start: 2404471
End: 2404920
Strand: Reverse
Name: yqeY [H]
Synonym: RSc2217
Alternate gene names: 17546936
Gene position: 2404920-2404471 (Counterclockwise)
Preceding gene: 17546937
Following gene: 17546935
Centisome position: 64.71
GC content: 68.22
Gene sequence:
>450_bases ATGTCGCTGAAGGCACAGATCACGGAAGACATGAAGGCCGCCATGCGCGCCAAGGAAATGGACCGCCTGGGCACCATCCG CCTGTTGCAGGCCGCCATCAAGCAGCGCGAGGTGGATGAGCGCATCGAGCTGGACGATGCCGCCGTGCTGGCCGTGATCG ACAAGATGATCAAGCAGCGCAGGGACTCCATTTCGCAGTTCCAGCAGGCTGGCCGCGATGACCTGGTCGCCAAGGAATCG GCCGAAGTCGCCGTGCTGCAGGCCTACATGCCGGCGCAGCTGTCGGACGCCGAGGTCGACGCCGCCGTGCGCGATGCCGT GGCCAAGGCCGGTGCCGCCGGTCCGCAGGACATGGGCAAGGTGATGGGCCTGCTCAAGCCGGCCCTGGCCGGCCGCGCCG ACATGACGCAGGTCTCGGCCCGCGTGAAGGCCGTGCTGGCCGGCGCCTGA
Upstream 100 bases:
>100_bases GCCCCGGTTCTGTGCTACGATCAATGATCCGCGTTGTTCCACGTTTGCAACCCGCTGGGCGTGCCGCCCGAGCGGGTTTT GCCGTTTATCGGAGTTTCGA
Downstream 100 bases:
>100_bases GTCCGGCCGCGTTCCGTCATCCGCAAGGCGCGCCCCACGCGTGATTCCGCAGCCGTTCATCGACGATCTGCTCAACCGCG TCGACATCGTCGACGTGGTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 149; Mature: 148
Protein sequence:
>149_residues MSLKAQITEDMKAAMRAKEMDRLGTIRLLQAAIKQREVDERIELDDAAVLAVIDKMIKQRRDSISQFQQAGRDDLVAKES AEVAVLQAYMPAQLSDAEVDAAVRDAVAKAGAAGPQDMGKVMGLLKPALAGRADMTQVSARVKAVLAGA
Sequences:
>Translated_149_residues MSLKAQITEDMKAAMRAKEMDRLGTIRLLQAAIKQREVDERIELDDAAVLAVIDKMIKQRRDSISQFQQAGRDDLVAKES AEVAVLQAYMPAQLSDAEVDAAVRDAVAKAGAAGPQDMGKVMGLLKPALAGRADMTQVSARVKAVLAGA >Mature_148_residues SLKAQITEDMKAAMRAKEMDRLGTIRLLQAAIKQREVDERIELDDAAVLAVIDKMIKQRRDSISQFQQAGRDDLVAKESA EVAVLQAYMPAQLSDAEVDAAVRDAVAKAGAAGPQDMGKVMGLLKPALAGRADMTQVSARVKAVLAGA
Specific function: Unknown
COG id: COG1610
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003789 - InterPro: IPR023168 - InterPro: IPR019004 [H]
Pfam domain/function: PF09424 YqeY [H]
EC number: NA
Molecular weight: Translated: 15949; Mature: 15818
Theoretical pI: Translated: 6.97; Mature: 6.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 6.0 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 5.4 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLKAQITEDMKAAMRAKEMDRLGTIRLLQAAIKQREVDERIELDDAAVLAVIDKMIKQR CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RDSISQFQQAGRDDLVAKESAEVAVLQAYMPAQLSDAEVDAAVRDAVAKAGAAGPQDMGK HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCHHHHHH VMGLLKPALAGRADMTQVSARVKAVLAGA HHHHHHHHHCCCHHHHHHHHHHHHHHCCC >Mature Secondary Structure SLKAQITEDMKAAMRAKEMDRLGTIRLLQAAIKQREVDERIELDDAAVLAVIDKMIKQR CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RDSISQFQQAGRDDLVAKESAEVAVLQAYMPAQLSDAEVDAAVRDAVAKAGAAGPQDMGK HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCHHHHHH VMGLLKPALAGRADMTQVSARVKAVLAGA HHHHHHHHHCCCHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8969508; 9384377; 9023197 [H]