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The map label for this gene is yeeY [H]

Identifier: 17546928

GI number: 17546928

Start: 2393097

End: 2393999

Strand: Direct

Name: yeeY [H]

Synonym: RSc2209

Alternate gene names: 17546928

Gene position: 2393097-2393999 (Clockwise)

Preceding gene: 17546925

Following gene: 17546929

Centisome position: 64.39

GC content: 71.1

Gene sequence:

>903_bases
ATGGCGCTCTCCCTCGAATCCCTGGAAGTGCTGGACGCGATCGAACGCAAGGGCAGCTTTGCCGCCGCCGCGCACGAACT
GGGCAAGGTGCCGTCGGCACTGACCTACGTGGTGCGCAAGCTGGAGGACGACCTGGACGTGCTGCTGTTCGACCGCCGCC
GCCACCGCGCCGAACTGACGCCCGCCGGCCGCGCGCTGCTGGACGAAGGCCGCCACCTGCTGCAGGCCGCCGACGAGCTG
GCCCGCCGCGTCAAGCGCCTGGCCACCGGCTGGGAAGCGACGCTGACCATCGTGATGGACGACCTCGTCCACTTCCGCGC
GCTGATGCCGGTGATCCAGGACTTCTATGCAGAGAACACCGCCACCCGCCTGCGCTTCTGCCGCGAAGTGCTGGCCGGCA
GCTGGGATGCGCTGCTCTCCGGGCGCGCCGATCTGCTGATCGGCCCCGCGCACATCGCGCCGGTGCAAGGCGTGCAGACG
CGTCCGCTGGGCGAGATTCCCTTCGTCTTCGCGGTGGCGGCGCATCACCCGCTGGCGCAGCTGGAGGAACCCCTGCCCGC
CAGCGCCATCGCGCGCCACCGCATCGTGGCGGTGGGCGACACCTCGCGCAACCTGCCGCCGCGCACCGTCGGCATCATGG
CCGGCCAGGACACGCTGGTGGTGCCGGCCATGGCCGACAAGGTCCAGGCGCAGATCCGCGGCCTCGGCTGCGGCTGGCTG
CCGAGGCCGCTGGCGCAGCCCTACCTGGATTCCGGCGTGTTGGTGGCCAAGGCCACGGTGGAGGACCGCCGCGCGGGCAA
CTTCCAGATCGCCTGGCGCACCAACATGCGCGGCAAGGCACTGCAGTGGTGGGTCGACAAGCTTGAAGACCCGCGCCTGG
CGCAGGCCCTGCTGATGCAGTAG

Upstream 100 bases:

>100_bases
AATCTCCTATCCAAATACTGCATTGATGGGATCAATGGTACGATGGCTGGCCGTATTCTGGCCAAACGGCTTTGATCCAT
CTCATCAAATTTTCTGAATA

Downstream 100 bases:

>100_bases
ACCCTCCGATCGCGCACAATAGCGCCATCGGCCCTTGCCCGACGCCCGGAGTCCCGCGTTGTCCCAAGCCAATCTCGAAT
TCCCCGAATCCGTTGCAGCG

Product: transcriptional regulator transcription regulator protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 300; Mature: 299

Protein sequence:

>300_residues
MALSLESLEVLDAIERKGSFAAAAHELGKVPSALTYVVRKLEDDLDVLLFDRRRHRAELTPAGRALLDEGRHLLQAADEL
ARRVKRLATGWEATLTIVMDDLVHFRALMPVIQDFYAENTATRLRFCREVLAGSWDALLSGRADLLIGPAHIAPVQGVQT
RPLGEIPFVFAVAAHHPLAQLEEPLPASAIARHRIVAVGDTSRNLPPRTVGIMAGQDTLVVPAMADKVQAQIRGLGCGWL
PRPLAQPYLDSGVLVAKATVEDRRAGNFQIAWRTNMRGKALQWWVDKLEDPRLAQALLMQ

Sequences:

>Translated_300_residues
MALSLESLEVLDAIERKGSFAAAAHELGKVPSALTYVVRKLEDDLDVLLFDRRRHRAELTPAGRALLDEGRHLLQAADEL
ARRVKRLATGWEATLTIVMDDLVHFRALMPVIQDFYAENTATRLRFCREVLAGSWDALLSGRADLLIGPAHIAPVQGVQT
RPLGEIPFVFAVAAHHPLAQLEEPLPASAIARHRIVAVGDTSRNLPPRTVGIMAGQDTLVVPAMADKVQAQIRGLGCGWL
PRPLAQPYLDSGVLVAKATVEDRRAGNFQIAWRTNMRGKALQWWVDKLEDPRLAQALLMQ
>Mature_299_residues
ALSLESLEVLDAIERKGSFAAAAHELGKVPSALTYVVRKLEDDLDVLLFDRRRHRAELTPAGRALLDEGRHLLQAADELA
RRVKRLATGWEATLTIVMDDLVHFRALMPVIQDFYAENTATRLRFCREVLAGSWDALLSGRADLLIGPAHIAPVQGVQTR
PLGEIPFVFAVAAHHPLAQLEEPLPASAIARHRIVAVGDTSRNLPPRTVGIMAGQDTLVVPAMADKVQAQIRGLGCGWLP
RPLAQPYLDSGVLVAKATVEDRRAGNFQIAWRTNMRGKALQWWVDKLEDPRLAQALLMQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH lysR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI87082024, Length=285, Percent_Identity=44.2105263157895, Blast_Score=237, Evalue=6e-64,
Organism=Escherichia coli, GI1789492, Length=293, Percent_Identity=42.6621160409556, Blast_Score=209, Evalue=2e-55,
Organism=Escherichia coli, GI1787949, Length=285, Percent_Identity=36.4912280701754, Blast_Score=170, Evalue=8e-44,
Organism=Escherichia coli, GI1786713, Length=279, Percent_Identity=30.8243727598566, Blast_Score=139, Evalue=2e-34,
Organism=Escherichia coli, GI1786508, Length=280, Percent_Identity=29.2857142857143, Blast_Score=139, Evalue=2e-34,
Organism=Escherichia coli, GI145693105, Length=204, Percent_Identity=25.4901960784314, Blast_Score=70, Evalue=2e-13,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000847
- InterPro:   IPR005119
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00126 HTH_1; PF03466 LysR_substrate [H]

EC number: NA

Molecular weight: Translated: 33064; Mature: 32933

Theoretical pI: Translated: 8.27; Mature: 8.27

Prosite motif: PS50931 HTH_LYSR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALSLESLEVLDAIERKGSFAAAAHELGKVPSALTYVVRKLEDDLDVLLFDRRRHRAELT
CCCCHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHCCCC
PAGRALLDEGRHLLQAADELARRVKRLATGWEATLTIVMDDLVHFRALMPVIQDFYAENT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
ATRLRFCREVLAGSWDALLSGRADLLIGPAHIAPVQGVQTRPLGEIPFVFAVAAHHPLAQ
HHHHHHHHHHHCCCHHHHHCCCCCEEECCHHHCCCCCCCCCCCCCCCHHHHHHHCCCHHH
LEEPLPASAIARHRIVAVGDTSRNLPPRTVGIMAGQDTLVVPAMADKVQAQIRGLGCGWL
HCCCCCHHHHHHCEEEEECCCCCCCCCCEEEEEECCCCEEECHHHHHHHHHHHCCCCCCC
PRPLAQPYLDSGVLVAKATVEDRRAGNFQIAWRTNMRGKALQWWVDKLEDPRLAQALLMQ
CCHHHCHHHCCCEEEEEECHHHCCCCCEEEEEECCCCCHHHHHHHHHCCCHHHHHHHHCC
>Mature Secondary Structure 
ALSLESLEVLDAIERKGSFAAAAHELGKVPSALTYVVRKLEDDLDVLLFDRRRHRAELT
CCCHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHCCCC
PAGRALLDEGRHLLQAADELARRVKRLATGWEATLTIVMDDLVHFRALMPVIQDFYAENT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
ATRLRFCREVLAGSWDALLSGRADLLIGPAHIAPVQGVQTRPLGEIPFVFAVAAHHPLAQ
HHHHHHHHHHHCCCHHHHHCCCCCEEECCHHHCCCCCCCCCCCCCCCHHHHHHHCCCHHH
LEEPLPASAIARHRIVAVGDTSRNLPPRTVGIMAGQDTLVVPAMADKVQAQIRGLGCGWL
HCCCCCHHHHHHCEEEEECCCCCCCCCCEEEEEECCCCEEECHHHHHHHHHHHCCCCCCC
PRPLAQPYLDSGVLVAKATVEDRRAGNFQIAWRTNMRGKALQWWVDKLEDPRLAQALLMQ
CCHHHCHHHCCCEEEEEECHHHCCCCCEEEEEECCCCCHHHHHHHHHCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097040; 9278503 [H]