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The map label for this gene is ybgK [H]

Identifier: 17546889

GI number: 17546889

Start: 2352813

End: 2353874

Strand: Reverse

Name: ybgK [H]

Synonym: RSc2170

Alternate gene names: 17546889

Gene position: 2353874-2352813 (Counterclockwise)

Preceding gene: 17546890

Following gene: 17546888

Centisome position: 63.34

GC content: 72.98

Gene sequence:

>1062_bases
ATGAGCCGGCCCACTTCCCGCGCCGCGCCGGCCTTGATCGAGATCGTGCGGGCCGGCGTGCTGACGTCGGTGCAGGACCT
CGGCCGCACCGGCTATCGCCGCTTCGGCGTGTGCATGTCGGGCGCTCTCGACCCGCTGTCGCTGTACGTCGGCAACCGGC
TGGTGGGCAACCGCAGCGATGCGGCCGGCATCGAGTTCACGCTGGGCCACGCCACGCTGCGGTTTCTGGCCGACGGGCTG
GTCGCCCTGACCGGGGCCGACTGCCTCGCCACGCTGGATGGGGCGCCCGTCCATGCCTGGCATGCCTTTCCCGTGCAGCG
CGGCCAGACGCTGACGCTGCGCGTGGCGCAGGGCGGCGTGCGCGCCTACCTGTGCGTGGCCGGCGGCATCGACGTGCCGG
AGATGATGGGCTCGCGCGCCACCGACCTCAAGGCCGGCTTCGGCGGCTTCGAAGGTCGTCCGCTGCGCGACGGCGACCGG
CTGGCCGCGCTGCCGGCCGATCGGTCGCACGCGCCCGACGTCAGCGGCGCCGCGATCGGCGTGAAGGCGCCGCGCTGGAC
CTTCGACCGCATGCGTGGCGAGCTTCCGGTGATGCGCGTGCTGCCCGGTCCCGAGTACGACGATTTCCTGGCCGATTCGC
AGGCCGCGTTCTGGGAATCGGAGTGGACGCTCACCCCCAACAGCAACCGCATGGGCTTTCGCCTGCAGGGGCCGGAACTC
GTGCGCAGGCAGCTGTGCAGCGGCGACCTGCTGTCGCACGGCGTGGTGCCGGGCGTGATCCAGGTGCCGCCGTCCGGCCA
GCCGATCGTGCTGATGGCCGACGCGCAGACCACCGGCGGCTACCCGAAGATCGGCACCGTCATCCTGGCCGACCAGTGGC
GCCTGGCGCAGGTGCCGCTCGGCACGCGCATCCGCTTTGCCCGCGCGACGCTGGAAGAGGCCGAGGCCGCGCGCGCCGAC
GTGTCGCGCTACCTGCAGCAGATCGAGACGGCGCTGGACTGGCAGCGCCGGGGCATCCTGTCGGTGGCGCGGCGCACCGC
CAGGACACGCCCGATGGCTTGA

Upstream 100 bases:

>100_bases
TCGGCCGCACGGACGCGGCGCTGTTCCTGCCCCAGCGCGACCCGCCGGCGCTGCTGGCGCCCGGAGACCGCATCCGCTTT
GTCGCCTCGAAGGTGCACGC

Downstream 100 bases:

>100_bases
TGGAACGAGGAACCTACCGATGACAGCAATCGACCTGAACGCAGACCTGGGTGAAGGCTGCGACAACGACGAAGCCCTGC
TCGCGCTGGTGAGCTCGGCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 353; Mature: 352

Protein sequence:

>353_residues
MSRPTSRAAPALIEIVRAGVLTSVQDLGRTGYRRFGVCMSGALDPLSLYVGNRLVGNRSDAAGIEFTLGHATLRFLADGL
VALTGADCLATLDGAPVHAWHAFPVQRGQTLTLRVAQGGVRAYLCVAGGIDVPEMMGSRATDLKAGFGGFEGRPLRDGDR
LAALPADRSHAPDVSGAAIGVKAPRWTFDRMRGELPVMRVLPGPEYDDFLADSQAAFWESEWTLTPNSNRMGFRLQGPEL
VRRQLCSGDLLSHGVVPGVIQVPPSGQPIVLMADAQTTGGYPKIGTVILADQWRLAQVPLGTRIRFARATLEEAEAARAD
VSRYLQQIETALDWQRRGILSVARRTARTRPMA

Sequences:

>Translated_353_residues
MSRPTSRAAPALIEIVRAGVLTSVQDLGRTGYRRFGVCMSGALDPLSLYVGNRLVGNRSDAAGIEFTLGHATLRFLADGL
VALTGADCLATLDGAPVHAWHAFPVQRGQTLTLRVAQGGVRAYLCVAGGIDVPEMMGSRATDLKAGFGGFEGRPLRDGDR
LAALPADRSHAPDVSGAAIGVKAPRWTFDRMRGELPVMRVLPGPEYDDFLADSQAAFWESEWTLTPNSNRMGFRLQGPEL
VRRQLCSGDLLSHGVVPGVIQVPPSGQPIVLMADAQTTGGYPKIGTVILADQWRLAQVPLGTRIRFARATLEEAEAARAD
VSRYLQQIETALDWQRRGILSVARRTARTRPMA
>Mature_352_residues
SRPTSRAAPALIEIVRAGVLTSVQDLGRTGYRRFGVCMSGALDPLSLYVGNRLVGNRSDAAGIEFTLGHATLRFLADGLV
ALTGADCLATLDGAPVHAWHAFPVQRGQTLTLRVAQGGVRAYLCVAGGIDVPEMMGSRATDLKAGFGGFEGRPLRDGDRL
AALPADRSHAPDVSGAAIGVKAPRWTFDRMRGELPVMRVLPGPEYDDFLADSQAAFWESEWTLTPNSNRMGFRLQGPELV
RRQLCSGDLLSHGVVPGVIQVPPSGQPIVLMADAQTTGGYPKIGTVILADQWRLAQVPLGTRIRFARATLEEAEAARADV
SRYLQQIETALDWQRRGILSVARRTARTRPMA

Specific function: Unknown

COG id: COG1984

COG function: function code E; Allophanate hydrolase subunit 2

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis ycsJ and yeast urea amidolyase (DUR1,2) [H]

Homologues:

Organism=Escherichia coli, GI1786930, Length=317, Percent_Identity=51.7350157728707, Blast_Score=294, Evalue=7e-81,
Organism=Saccharomyces cerevisiae, GI6319685, Length=329, Percent_Identity=31.9148936170213, Blast_Score=142, Evalue=7e-35,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003778 [H]

Pfam domain/function: PF02626 AHS2 [H]

EC number: NA

Molecular weight: Translated: 38020; Mature: 37889

Theoretical pI: Translated: 9.53; Mature: 9.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRPTSRAAPALIEIVRAGVLTSVQDLGRTGYRRFGVCMSGALDPLSLYVGNRLVGNRSD
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCEEECCCCC
AAGIEFTLGHATLRFLADGLVALTGADCLATLDGAPVHAWHAFPVQRGQTLTLRVAQGGV
CCCEEEEEHHHHHHHHHCCHHEEECCHHHHHCCCCCEEEEEECCCCCCCEEEEEEECCCC
RAYLCVAGGIDVPEMMGSRATDLKAGFGGFEGRPLRDGDRLAALPADRSHAPDVSGAAIG
EEEEEEECCCCHHHHHCCCCCHHHCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCEEE
VKAPRWTFDRMRGELPVMRVLPGPEYDDFLADSQAAFWESEWTLTPNSNRMGFRLQGPEL
CCCCCCHHHHHCCCCCEEEECCCCCHHHHHCCCCHHEECCCEEECCCCCCCEEEECCHHH
VRRQLCSGDLLSHGVVPGVIQVPPSGQPIVLMADAQTTGGYPKIGTVILADQWRLAQVPL
HHHHHCCCCHHHCCCCCCEEECCCCCCCEEEEECCCCCCCCCCCCEEEEECCCEEEECCC
GTRIRFARATLEEAEAARADVSRYLQQIETALDWQRRGILSVARRTARTRPMA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
SRPTSRAAPALIEIVRAGVLTSVQDLGRTGYRRFGVCMSGALDPLSLYVGNRLVGNRSD
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCEEECCCCC
AAGIEFTLGHATLRFLADGLVALTGADCLATLDGAPVHAWHAFPVQRGQTLTLRVAQGGV
CCCEEEEEHHHHHHHHHCCHHEEECCHHHHHCCCCCEEEEEECCCCCCCEEEEEEECCCC
RAYLCVAGGIDVPEMMGSRATDLKAGFGGFEGRPLRDGDRLAALPADRSHAPDVSGAAIG
EEEEEEECCCCHHHHHCCCCCHHHCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCEEE
VKAPRWTFDRMRGELPVMRVLPGPEYDDFLADSQAAFWESEWTLTPNSNRMGFRLQGPEL
CCCCCCHHHHHCCCCCEEEECCCCCHHHHHCCCCHHEECCCEEECCCCCCCEEEECCHHH
VRRQLCSGDLLSHGVVPGVIQVPPSGQPIVLMADAQTTGGYPKIGTVILADQWRLAQVPL
HHHHHCCCCHHHCCCCCCEEECCCCCCCEEEEECCCCCCCCCCCCEEEEECCCEEEECCC
GTRIRFARATLEEAEAARADVSRYLQQIETALDWQRRGILSVARRTARTRPMA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]